| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920921
Identifier: 238920921
GI number: 238920921
Start: 2935013
End: 2935381
Strand: Reverse
Name: 238920921
Synonym: NT01EI_3049
Alternate gene names: NA
Gene position: 2935381-2935013 (Counterclockwise)
Preceding gene: 238920922
Following gene: 238920920
Centisome position: 77.0
GC content: 42.55
Gene sequence:
>369_bases ATGAAAAGAATTTTACCGTTGGCAGCAGTATGCCTGTTGGCAGGTTGTCAGACTTTCTTTATCGGCAGCGGTATGGATTC AACCAATAATACCTCTGTGCCTTATATTCAGAGAATCCAGAAAGCCGACACGGTTGGTCATACTGATCCAGAACAACGTA AAATGGATATTTATGCCTGTGGAGTAGGGCCTTCTGCAGATTTAAATGATAAGCGCTGGCAGCCAGCTAATGGATATCCA AATCTTTCTGTAAAAGACAGGGCTGGAAAAAGGGATAAGCTAGAACATTGCATGGAAGGTAAAGGGTATATTGTATTTGG CTTTGAAGAATGTGGATCACAAAAAGACCCAACCGGGCTGTGCAATTAG
Upstream 100 bases:
>100_bases TGCTTGGGCGGCGCGACCATTCCGCTGGCGGCACGTTTTGTCGTGAGTGGAGTCGTCTCATCAGAATTGCTGAAATTTAT TTTTGCGACGGAGAAATAAG
Downstream 100 bases:
>100_bases CGGCCTGAATTTCGGCATTCTGGGTTACTTGGCTGAATTCTGTGTGGCTGATGCCAATCATAATGGACGCGCCTGCGGTA TGACGCAGTCAGCCGTCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MKRILPLAAVCLLAGCQTFFIGSGMDSTNNTSVPYIQRIQKADTVGHTDPEQRKMDIYACGVGPSADLNDKRWQPANGYP NLSVKDRAGKRDKLEHCMEGKGYIVFGFEECGSQKDPTGLCN
Sequences:
>Translated_122_residues MKRILPLAAVCLLAGCQTFFIGSGMDSTNNTSVPYIQRIQKADTVGHTDPEQRKMDIYACGVGPSADLNDKRWQPANGYP NLSVKDRAGKRDKLEHCMEGKGYIVFGFEECGSQKDPTGLCN >Mature_122_residues MKRILPLAAVCLLAGCQTFFIGSGMDSTNNTSVPYIQRIQKADTVGHTDPEQRKMDIYACGVGPSADLNDKRWQPANGYP NLSVKDRAGKRDKLEHCMEGKGYIVFGFEECGSQKDPTGLCN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13387; Mature: 13387
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILPLAAVCLLAGCQTFFIGSGMDSTNNTSVPYIQRIQKADTVGHTDPEQRKMDIYAC CCCHHHHHHHHHHHCCHHEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEE GVGPSADLNDKRWQPANGYPNLSVKDRAGKRDKLEHCMEGKGYIVFGFEECGSQKDPTGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEHHHHCCCCCCCCC CN CC >Mature Secondary Structure MKRILPLAAVCLLAGCQTFFIGSGMDSTNNTSVPYIQRIQKADTVGHTDPEQRKMDIYAC CCCHHHHHHHHHHHCCHHEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEE GVGPSADLNDKRWQPANGYPNLSVKDRAGKRDKLEHCMEGKGYIVFGFEECGSQKDPTGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEHHHHCCCCCCCCC CN CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA