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The map label for this gene is yfiC [C]

Identifier: 238920913

GI number: 238920913

Start: 2929812

End: 2930555

Strand: Reverse

Name: yfiC [C]

Synonym: NT01EI_3041

Alternate gene names: 238920913

Gene position: 2930555-2929812 (Counterclockwise)

Preceding gene: 238920915

Following gene: 238920912

Centisome position: 76.87

GC content: 63.71

Gene sequence:

>744_bases
GTGCCGCATCCGCCCTCCGCCGCGCTGTCCCTGCCGCGCAACGGATTTACCCTCAAGCGTTTCTTTGTCGCCCACGATCG
CTGTGAAATGAAGGTCGGTACCGACAGCATTATGCTTGGGGCCTGGCTACCCCTGCGCGGCGATGAGCGGCATATTCTGG
ATATCGGCAGCGGCAGTGGGGTGCTGGCGCTGATGATGGCGCAGCGCAGTACGGCGCAGGTCGACGGCGTGGAGATCGAG
CCCGGCGCGGCGACACAGGGGCAGGAGAATTTTCTGGCTTCGCCCTGGCCGACGCGGCTGACCATGCATACGCTCTCTCT
GCAGGCGTTTAGCGCCGGGTGCGGACGACGCTATGATCTGATCGTCAGTAATCCGCCCTACTTTGCGCCGGGCGTCGCCT
GTCGTACGGCGGCCCGGGCGACGGCGCGCTATACGGACTCGCTGGATCACGCGGCGCTGCTGCGACATGCCGCCGAGTTG
AGCTGCGAAGACGGGCGTCTGGCGCTGGTACTGCCGGTCGAGGCCGCCGAGTCGGTGGTCAGCAAGGGGATGACGCACGG
TTGGCATCTGCTGCGCCGGACAGCGGTGCGCGATCGCGCCGATAAGCCGGTGCGCCGGACGCTGTTGTTGTTTGGACGCA
TCCCCGCGGCCGTACAGTCGAATACACTGGATATTCGCGATGATTCCAGCGAATACTCCTGCATCTTTCGCAACATGACG
AAAGATTTCTACCTTTTCTTCTAG

Upstream 100 bases:

>100_bases
CGCAGTCGCGCAGTCGCGCAGGCGCGGCGATGGCCATTCCTTTTTTACGGCGGCGCGGGTATGTTATGCGCGTTACTCTC
TCAGTCCCAAGGAGCCTGCT

Downstream 100 bases:

>100_bases
TGCTGTTGCTTTAATTAGCACGATATTCCAATATTCCTCTTGGGGCAGGCGTATCCTGCCCATAATATCCTGGCCTGAGG
GTAGGGGTATTTAAGGGATT

Product: methyltransferase small

Products: NA

Alternate protein names: tRNA m6A37 methyltransferase

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MPHPPSAALSLPRNGFTLKRFFVAHDRCEMKVGTDSIMLGAWLPLRGDERHILDIGSGSGVLALMMAQRSTAQVDGVEIE
PGAATQGQENFLASPWPTRLTMHTLSLQAFSAGCGRRYDLIVSNPPYFAPGVACRTAARATARYTDSLDHAALLRHAAEL
SCEDGRLALVLPVEAAESVVSKGMTHGWHLLRRTAVRDRADKPVRRTLLLFGRIPAAVQSNTLDIRDDSSEYSCIFRNMT
KDFYLFF

Sequences:

>Translated_247_residues
MPHPPSAALSLPRNGFTLKRFFVAHDRCEMKVGTDSIMLGAWLPLRGDERHILDIGSGSGVLALMMAQRSTAQVDGVEIE
PGAATQGQENFLASPWPTRLTMHTLSLQAFSAGCGRRYDLIVSNPPYFAPGVACRTAARATARYTDSLDHAALLRHAAEL
SCEDGRLALVLPVEAAESVVSKGMTHGWHLLRRTAVRDRADKPVRRTLLLFGRIPAAVQSNTLDIRDDSSEYSCIFRNMT
KDFYLFF
>Mature_246_residues
PHPPSAALSLPRNGFTLKRFFVAHDRCEMKVGTDSIMLGAWLPLRGDERHILDIGSGSGVLALMMAQRSTAQVDGVEIEP
GAATQGQENFLASPWPTRLTMHTLSLQAFSAGCGRRYDLIVSNPPYFAPGVACRTAARATARYTDSLDHAALLRHAAELS
CEDGRLALVLPVEAAESVVSKGMTHGWHLLRRTAVRDRADKPVRRTLLLFGRIPAAVQSNTLDIRDDSSEYSCIFRNMTK
DFYLFF

Specific function: Specifically methylates the adenine in position 37 of tRNA(Val)

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. tRNA (adenine-N(6)-)-methyltransferase family

Homologues:

Organism=Escherichia coli, GI87082131, Length=238, Percent_Identity=47.4789915966387, Blast_Score=215, Evalue=2e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TRMN6_EDWI9 (C5BAI6)

Other databases:

- EMBL:   CP001600
- RefSeq:   YP_002934428.1
- ProteinModelPortal:   C5BAI6
- GeneID:   7960318
- GenomeReviews:   CP001600_GR
- KEGG:   eic:NT01EI_3041
- OMA:   FKQFHIN
- ProtClustDB:   CLSK2813539
- GO:   GO:0005737
- HAMAP:   MF_01872
- InterPro:   IPR002052
- InterPro:   IPR002296
- InterPro:   IPR007848
- InterPro:   IPR022882
- PRINTS:   PR00507

Pfam domain/function: PF05175 MTS

EC number: =2.1.1.55

Molecular weight: Translated: 27200; Mature: 27069

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHPPSAALSLPRNGFTLKRFFVAHDRCEMKVGTDSIMLGAWLPLRGDERHILDIGSGSG
CCCCCCCCEECCCCCCEEEEEEEECCCEEEEECCCEEEEEEECCCCCCCCEEEEECCCCC
VLALMMAQRSTAQVDGVEIEPGAATQGQENFLASPWPTRLTMHTLSLQAFSAGCGRRYDL
EEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHCCCCCEEEE
IVSNPPYFAPGVACRTAARATARYTDSLDHAALLRHAAELSCEDGRLALVLPVEAAESVV
EECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHH
SKGMTHGWHLLRRTAVRDRADKPVRRTLLLFGRIPAAVQSNTLDIRDDSSEYSCIFRNMT
HCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCEEEECCCCCHHHHHHHHCC
KDFYLFF
CEEEEEC
>Mature Secondary Structure 
PHPPSAALSLPRNGFTLKRFFVAHDRCEMKVGTDSIMLGAWLPLRGDERHILDIGSGSG
CCCCCCCEECCCCCCEEEEEEEECCCEEEEECCCEEEEEEECCCCCCCCEEEEECCCCC
VLALMMAQRSTAQVDGVEIEPGAATQGQENFLASPWPTRLTMHTLSLQAFSAGCGRRYDL
EEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHCCCCCEEEE
IVSNPPYFAPGVACRTAARATARYTDSLDHAALLRHAAELSCEDGRLALVLPVEAAESVV
EECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHH
SKGMTHGWHLLRRTAVRDRADKPVRRTLLLFGRIPAAVQSNTLDIRDDSSEYSCIFRNMT
HCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHCCCEEEECCCCCHHHHHHHHCC
KDFYLFF
CEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA