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The map label for this gene is rseC [H]

Identifier: 238920908

GI number: 238920908

Start: 2925149

End: 2925625

Strand: Reverse

Name: rseC [H]

Synonym: NT01EI_3036

Alternate gene names: 238920908

Gene position: 2925625-2925149 (Counterclockwise)

Preceding gene: 238920909

Following gene: 238920907

Centisome position: 76.74

GC content: 68.34

Gene sequence:

>477_bases
ATGATGCGTGAGTGGGCAACGGTGATCAGCTGGCGGCAGGGGGAAGCTCTGCTGCAGTGCGAGTCGCATGCCGGGTGCAG
CGGCTGTCGGGCCCGTCAGGGGTGCGGCAGCGCGGCGCTGGCCGAGCTGGGGCCGCAGACCCGGCATCAGCTGAGGTTGG
CCGTTAGCCAGCCGCTGCAGCCGGGGCAGCGGGTTGAAATCGGCCTGCAGGAGGCCAGCGTGCTACGCTCTGCGCTGTTG
GTTTATATTACGCCATTGGTCGGGCTGCTGGGCGGCGGTGGCGGCGGTCAACTGTGGCTTGGATCGGACGGCGCCAGCGC
GCTCGGTGCGCTGATCGGCGGCGTGCTCGGTTTTGCCTTGGCGCGCAGTTTGGCGCGCCGTATGGTGCAGGGCGAGGCCT
ACCAACCGGTACTGCTGCAGGTGGCGCTGCCGCCTACCCAGCTGCGCAGCATAACGAATCCACCCAATCGCGAGTGA

Upstream 100 bases:

>100_bases
GAAACCCGCAATAACACCGAAATCAGCGTGGTGGGTGAGCTGCCGCCGATGACCGCCAAGCGCATCGCTGCGTCTGTCCG
TTTCAGCCGGTAATGCCACG

Downstream 100 bases:

>100_bases
AGCGCTAGGTTTTGGCCTATGGGCTGTGTAAAATGCAGCGATTCGGCGCCTGGCGCCACTTAACCCAAATCATCGCTTTG
AGCCCGTCCGCGTGTCCTTA

Product: SoxR reducing system protein RseC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MMREWATVISWRQGEALLQCESHAGCSGCRARQGCGSAALAELGPQTRHQLRLAVSQPLQPGQRVEIGLQEASVLRSALL
VYITPLVGLLGGGGGGQLWLGSDGASALGALIGGVLGFALARSLARRMVQGEAYQPVLLQVALPPTQLRSITNPPNRE

Sequences:

>Translated_158_residues
MMREWATVISWRQGEALLQCESHAGCSGCRARQGCGSAALAELGPQTRHQLRLAVSQPLQPGQRVEIGLQEASVLRSALL
VYITPLVGLLGGGGGGQLWLGSDGASALGALIGGVLGFALARSLARRMVQGEAYQPVLLQVALPPTQLRSITNPPNRE
>Mature_158_residues
MMREWATVISWRQGEALLQCESHAGCSGCRARQGCGSAALAELGPQTRHQLRLAVSQPLQPGQRVEIGLQEASVLRSALL
VYITPLVGLLGGGGGGQLWLGSDGASALGALIGGVLGFALARSLARRMVQGEAYQPVLLQVALPPTQLRSITNPPNRE

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3086

COG function: function code T; Positive regulator of sigma E activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseC family [H]

Homologues:

Organism=Escherichia coli, GI1788923, Length=156, Percent_Identity=47.4358974358974, Blast_Score=153, Evalue=4e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007359 [H]

Pfam domain/function: PF04246 RseC_MucC [H]

EC number: NA

Molecular weight: Translated: 16589; Mature: 16589

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMREWATVISWRQGEALLQCESHAGCSGCRARQGCGSAALAELGPQTRHQLRLAVSQPLQ
CCCHHHHHHHHCCCCHHEEECCCCCCCCCHHHCCCCCHHHHHCCHHHHHHHHHHHHCCCC
PGQRVEIGLQEASVLRSALLVYITPLVGLLGGGGGGQLWLGSDGASALGALIGGVLGFAL
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHH
ARSLARRMVQGEAYQPVLLQVALPPTQLRSITNPPNRE
HHHHHHHHHCCCCCCCEEEEEECCHHHHHHCCCCCCCC
>Mature Secondary Structure
MMREWATVISWRQGEALLQCESHAGCSGCRARQGCGSAALAELGPQTRHQLRLAVSQPLQ
CCCHHHHHHHHCCCCHHEEECCCCCCCCCHHHCCCCCHHHHHCCHHHHHHHHHHHHCCCC
PGQRVEIGLQEASVLRSALLVYITPLVGLLGGGGGGQLWLGSDGASALGALIGGVLGFAL
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHH
ARSLARRMVQGEAYQPVLLQVALPPTQLRSITNPPNRE
HHHHHHHHHCCCCCCCEEEEEECCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7889935; 9278503 [H]