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The map label for this gene is rseB [H]

Identifier: 238920909

GI number: 238920909

Start: 2925633

End: 2926586

Strand: Reverse

Name: rseB [H]

Synonym: NT01EI_3037

Alternate gene names: 238920909

Gene position: 2926586-2925633 (Counterclockwise)

Preceding gene: 238920910

Following gene: 238920908

Centisome position: 76.77

GC content: 57.65

Gene sequence:

>954_bases
ATGAAGCACATTTGGTTTGCTCTTAGTCTGTTGACTGGCAGCCTATTTATCTCCTTTTCCGCTCTGGCCCAGGATACTGC
GCCGGGGCTGATGCTTCAGGAGATGAACAAGGCCAGCCAGTCACTCAATTACGAACTGGCGTTCATCAATATCACCAAGC
AGGGCGCCGAGTCGCTGCGCTATCGTCATGCACTGGAAAACCAACAGGTTTTGGCACAGCTGCTGCAAATGGATGGCCCG
CGGCGCGAGGTGGTGCTGCGTGGCAATGAGGTCAGCTACTTCGAGCCGGGTCTGGAGCCCTTTACCCTGACTGGCGATCA
CATTGTTGATGCGCTGCCGTCGGTGATTTTTGCTGATATTAACCAGCTGACACCCTACTATAATTTTATCTCCGTCGGAC
GTGCCCGCGTCGCCGATCGCCCCTGTGAGGTGATCCGGGTGGTGTCGCGCGACGGTATGCGCTTTAGCTATATCGTCTGG
ATCGATGAGGAGTCCAAGCTGCCGCTGCGGGTGGATTTGCTCGACCGTGACGGTGGGACTCTGGAGCAGTTTCGGGTCAT
CGCTTTCGACGTGGGACAGCAGGTAGCCAATGAGATGCGCAGTTTTAGCCGTCTGACTCTGCCGCCGCTGCTGCGTCTGC
CACCCGCTGAGCACGTCAGCTTCAACTGGCGCACCACTTGGGTGCCTGATGGTTTTAAAGAGGTTTCCCGCAGCCGCCGA
ACTCTGCCTTCCCTGTCCGAACCCGTTGAGTCCTGCCTGTACAGCGATGGGCTGTTCAGCTTTTCCGTCAACATCAGTCC
GACAACCGGCGACAGCCGCGACGATCAGTTCTTGCGTCAGGGGCGGCGAACCATTCATACCGAAACCCGCAATAACACCG
AAATCAGCGTGGTGGGTGAGCTGCCGCCGATGACCGCCAAGCGCATCGCTGCGTCTGTCCGTTTCAGCCGGTAA

Upstream 100 bases:

>100_bases
AGCGTCGTCTCCACGCTGAACAGCTGCAGACCCAGGATAGCAACGTGCAGGCGTCTATCCAGGTGCCCGGTACGCAGTCA
TTAGGAACTCAGCAGCAGTA

Downstream 100 bases:

>100_bases
TGCCACGATGATGCGTGAGTGGGCAACGGTGATCAGCTGGCGGCAGGGGGAAGCTCTGCTGCAGTGCGAGTCGCATGCCG
GGTGCAGCGGCTGTCGGGCC

Product: periplasmic negative regulator of sigmaE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MKHIWFALSLLTGSLFISFSALAQDTAPGLMLQEMNKASQSLNYELAFINITKQGAESLRYRHALENQQVLAQLLQMDGP
RREVVLRGNEVSYFEPGLEPFTLTGDHIVDALPSVIFADINQLTPYYNFISVGRARVADRPCEVIRVVSRDGMRFSYIVW
IDEESKLPLRVDLLDRDGGTLEQFRVIAFDVGQQVANEMRSFSRLTLPPLLRLPPAEHVSFNWRTTWVPDGFKEVSRSRR
TLPSLSEPVESCLYSDGLFSFSVNISPTTGDSRDDQFLRQGRRTIHTETRNNTEISVVGELPPMTAKRIAASVRFSR

Sequences:

>Translated_317_residues
MKHIWFALSLLTGSLFISFSALAQDTAPGLMLQEMNKASQSLNYELAFINITKQGAESLRYRHALENQQVLAQLLQMDGP
RREVVLRGNEVSYFEPGLEPFTLTGDHIVDALPSVIFADINQLTPYYNFISVGRARVADRPCEVIRVVSRDGMRFSYIVW
IDEESKLPLRVDLLDRDGGTLEQFRVIAFDVGQQVANEMRSFSRLTLPPLLRLPPAEHVSFNWRTTWVPDGFKEVSRSRR
TLPSLSEPVESCLYSDGLFSFSVNISPTTGDSRDDQFLRQGRRTIHTETRNNTEISVVGELPPMTAKRIAASVRFSR
>Mature_317_residues
MKHIWFALSLLTGSLFISFSALAQDTAPGLMLQEMNKASQSLNYELAFINITKQGAESLRYRHALENQQVLAQLLQMDGP
RREVVLRGNEVSYFEPGLEPFTLTGDHIVDALPSVIFADINQLTPYYNFISVGRARVADRPCEVIRVVSRDGMRFSYIVW
IDEESKLPLRVDLLDRDGGTLEQFRVIAFDVGQQVANEMRSFSRLTLPPLLRLPPAEHVSFNWRTTWVPDGFKEVSRSRR
TLPSLSEPVESCLYSDGLFSFSVNISPTTGDSRDDQFLRQGRRTIHTETRNNTEISVVGELPPMTAKRIAASVRFSR

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3026

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseB family [H]

Homologues:

Organism=Escherichia coli, GI1788924, Length=316, Percent_Identity=65.5063291139241, Blast_Score=428, Evalue=1e-121,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005588 [H]

Pfam domain/function: PF03888 MucB_RseB [H]

EC number: NA

Molecular weight: Translated: 35929; Mature: 35929

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHIWFALSLLTGSLFISFSALAQDTAPGLMLQEMNKASQSLNYELAFINITKQGAESLR
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEEEEHHHHHHHH
YRHALENQQVLAQLLQMDGPRREVVLRGNEVSYFEPGLEPFTLTGDHIVDALPSVIFADI
HHHHHCHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCCEEECCHHHHHHHHHHHHHHH
NQLTPYYNFISVGRARVADRPCEVIRVVSRDGMRFSYIVWIDEESKLPLRVDLLDRDGGT
HHCCHHHHHHHHCHHHHCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEECCCCC
LEQFRVIAFDVGQQVANEMRSFSRLTLPPLLRLPPAEHVSFNWRTTWVPDGFKEVSRSRR
HHHHEEHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCEEECEEEEECCCHHHHHHHHHH
TLPSLSEPVESCLYSDGLFSFSVNISPTTGDSRDDQFLRQGRRTIHTETRNNTEISVVGE
CCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCEEEEEEC
LPPMTAKRIAASVRFSR
CCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKHIWFALSLLTGSLFISFSALAQDTAPGLMLQEMNKASQSLNYELAFINITKQGAESLR
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEEEEHHHHHHHH
YRHALENQQVLAQLLQMDGPRREVVLRGNEVSYFEPGLEPFTLTGDHIVDALPSVIFADI
HHHHHCHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCCEEECCHHHHHHHHHHHHHHH
NQLTPYYNFISVGRARVADRPCEVIRVVSRDGMRFSYIVWIDEESKLPLRVDLLDRDGGT
HHCCHHHHHHHHCHHHHCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEECCCCC
LEQFRVIAFDVGQQVANEMRSFSRLTLPPLLRLPPAEHVSFNWRTTWVPDGFKEVSRSRR
HHHHEEHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCEEECEEEEECCCHHHHHHHHHH
TLPSLSEPVESCLYSDGLFSFSVNISPTTGDSRDDQFLRQGRRTIHTETRNNTEISVVGE
CCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCEEEEEEC
LPPMTAKRIAASVRFSR
CCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]