| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920867
Identifier: 238920867
GI number: 238920867
Start: 2881624
End: 2882055
Strand: Reverse
Name: 238920867
Synonym: NT01EI_2993
Alternate gene names: NA
Gene position: 2882055-2881624 (Counterclockwise)
Preceding gene: 238920868
Following gene: 238920866
Centisome position: 75.6
GC content: 62.04
Gene sequence:
>432_bases GTGTTGGATATCCACAACGGCCAGAGTGTCCTGTGTCAGGGCGGGCATCCTACCCTGCTGTGGATCCGGGCGGACGGCAG CCTGAACGGCATTGGTGCAGGCAAGATGCCGATCGGTATGTTTGGCCGGGCAGAGTATGAGGACCATTCGCTGACACAGG ATCCCAGTGATTGGCTGTGCCTGTGCAGCGAGGGTGTCAGCGGGTATGACAGTCCACAGGGCGAACTGCCCGGCGAGGTA CGTCTGCGTCGCGAACAGCAGGCACAGAGCTACGCGCTGGCGGCGCATCTGCTGCAGGCGCTGGCCGCCCTCTCGTGCTG GCACTACCCCGATGAGGAGGCCCTGCGCCAGCACTTTTCCGATGATATTTCACGGTTGATGATCACCTGCGGTGCCGATG GCCTGCAGGGACGGATAGAGGGGAACATATGA
Upstream 100 bases:
>100_bases TCCGTGCTGCCGTATCGCGTGGTGAGCGAACGTAATCGTCGCTTTTCCCTGGAGCCGCTGGAGGATGGCGTCGGGCGCTA TTTCACCCTGGGGGTATGAG
Downstream 100 bases:
>100_bases ATCTTGCTGTAGAGAAAGTGGATGATCTGACGATGGTATCGCCGCTGATCCGCCGCCTGGATGCGTCGGTTGTCGGGGTA TTTCGTCAGAATATCGTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: Serine Phosphatase RsbU Regulator Of Sigma Subunit
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MLDIHNGQSVLCQGGHPTLLWIRADGSLNGIGAGKMPIGMFGRAEYEDHSLTQDPSDWLCLCSEGVSGYDSPQGELPGEV RLRREQQAQSYALAAHLLQALAALSCWHYPDEEALRQHFSDDISRLMITCGADGLQGRIEGNI
Sequences:
>Translated_143_residues MLDIHNGQSVLCQGGHPTLLWIRADGSLNGIGAGKMPIGMFGRAEYEDHSLTQDPSDWLCLCSEGVSGYDSPQGELPGEV RLRREQQAQSYALAAHLLQALAALSCWHYPDEEALRQHFSDDISRLMITCGADGLQGRIEGNI >Mature_143_residues MLDIHNGQSVLCQGGHPTLLWIRADGSLNGIGAGKMPIGMFGRAEYEDHSLTQDPSDWLCLCSEGVSGYDSPQGELPGEV RLRREQQAQSYALAAHLLQALAALSCWHYPDEEALRQHFSDDISRLMITCGADGLQGRIEGNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15608; Mature: 15608
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDIHNGQSVLCQGGHPTLLWIRADGSLNGIGAGKMPIGMFGRAEYEDHSLTQDPSDWLC CCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEE LCSEGVSGYDSPQGELPGEVRLRREQQAQSYALAAHLLQALAALSCWHYPDEEALRQHFS EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH DDISRLMITCGADGLQGRIEGNI HHHHHHHHHCCCCCCCCEECCCC >Mature Secondary Structure MLDIHNGQSVLCQGGHPTLLWIRADGSLNGIGAGKMPIGMFGRAEYEDHSLTQDPSDWLC CCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEE LCSEGVSGYDSPQGELPGEVRLRREQQAQSYALAAHLLQALAALSCWHYPDEEALRQHFS EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH DDISRLMITCGADGLQGRIEGNI HHHHHHHHHCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA