Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238920867

Identifier: 238920867

GI number: 238920867

Start: 2881624

End: 2882055

Strand: Reverse

Name: 238920867

Synonym: NT01EI_2993

Alternate gene names: NA

Gene position: 2882055-2881624 (Counterclockwise)

Preceding gene: 238920868

Following gene: 238920866

Centisome position: 75.6

GC content: 62.04

Gene sequence:

>432_bases
GTGTTGGATATCCACAACGGCCAGAGTGTCCTGTGTCAGGGCGGGCATCCTACCCTGCTGTGGATCCGGGCGGACGGCAG
CCTGAACGGCATTGGTGCAGGCAAGATGCCGATCGGTATGTTTGGCCGGGCAGAGTATGAGGACCATTCGCTGACACAGG
ATCCCAGTGATTGGCTGTGCCTGTGCAGCGAGGGTGTCAGCGGGTATGACAGTCCACAGGGCGAACTGCCCGGCGAGGTA
CGTCTGCGTCGCGAACAGCAGGCACAGAGCTACGCGCTGGCGGCGCATCTGCTGCAGGCGCTGGCCGCCCTCTCGTGCTG
GCACTACCCCGATGAGGAGGCCCTGCGCCAGCACTTTTCCGATGATATTTCACGGTTGATGATCACCTGCGGTGCCGATG
GCCTGCAGGGACGGATAGAGGGGAACATATGA

Upstream 100 bases:

>100_bases
TCCGTGCTGCCGTATCGCGTGGTGAGCGAACGTAATCGTCGCTTTTCCCTGGAGCCGCTGGAGGATGGCGTCGGGCGCTA
TTTCACCCTGGGGGTATGAG

Downstream 100 bases:

>100_bases
ATCTTGCTGTAGAGAAAGTGGATGATCTGACGATGGTATCGCCGCTGATCCGCCGCCTGGATGCGTCGGTTGTCGGGGTA
TTTCGTCAGAATATCGTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: Serine Phosphatase RsbU Regulator Of Sigma Subunit

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MLDIHNGQSVLCQGGHPTLLWIRADGSLNGIGAGKMPIGMFGRAEYEDHSLTQDPSDWLCLCSEGVSGYDSPQGELPGEV
RLRREQQAQSYALAAHLLQALAALSCWHYPDEEALRQHFSDDISRLMITCGADGLQGRIEGNI

Sequences:

>Translated_143_residues
MLDIHNGQSVLCQGGHPTLLWIRADGSLNGIGAGKMPIGMFGRAEYEDHSLTQDPSDWLCLCSEGVSGYDSPQGELPGEV
RLRREQQAQSYALAAHLLQALAALSCWHYPDEEALRQHFSDDISRLMITCGADGLQGRIEGNI
>Mature_143_residues
MLDIHNGQSVLCQGGHPTLLWIRADGSLNGIGAGKMPIGMFGRAEYEDHSLTQDPSDWLCLCSEGVSGYDSPQGELPGEV
RLRREQQAQSYALAAHLLQALAALSCWHYPDEEALRQHFSDDISRLMITCGADGLQGRIEGNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15608; Mature: 15608

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDIHNGQSVLCQGGHPTLLWIRADGSLNGIGAGKMPIGMFGRAEYEDHSLTQDPSDWLC
CCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEE
LCSEGVSGYDSPQGELPGEVRLRREQQAQSYALAAHLLQALAALSCWHYPDEEALRQHFS
EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
DDISRLMITCGADGLQGRIEGNI
HHHHHHHHHCCCCCCCCEECCCC
>Mature Secondary Structure
MLDIHNGQSVLCQGGHPTLLWIRADGSLNGIGAGKMPIGMFGRAEYEDHSLTQDPSDWLC
CCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEE
LCSEGVSGYDSPQGELPGEVRLRREQQAQSYALAAHLLQALAALSCWHYPDEEALRQHFS
EECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
DDISRLMITCGADGLQGRIEGNI
HHHHHHHHHCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA