Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238920866

Identifier: 238920866

GI number: 238920866

Start: 2881274

End: 2881627

Strand: Reverse

Name: 238920866

Synonym: NT01EI_2992

Alternate gene names: NA

Gene position: 2881627-2881274 (Counterclockwise)

Preceding gene: 238920867

Following gene: 238920865

Centisome position: 75.59

GC content: 55.08

Gene sequence:

>354_bases
ATGAATCTTGCTGTAGAGAAAGTGGATGATCTGACGATGGTATCGCCGCTGATCCGCCGCCTGGATGCGTCGGTTGTCGG
GGTATTTCGTCAGAATATCGTTACGTTGGCCGTGCAGGGACATTACCGGCTGCTGCTGGGCTTCAGCCAGGTGGACTTCA
TTGACCGTCGCTGCCTGGGTGCGTTGTTATCGCGGCTGAGGTTGTTAAACCATCGGTGCGATCTGCTGCTGTGTGGGCTG
AGTGAACATATTTTGGGCATGTTCTGTATCATCCGGATGGATCGCGCTTTTCATATCGGTACGGATCGCCAGCAGATGCT
GGTGCTGCATGGCGTCTGGGGCGGTAGTCCATGA

Upstream 100 bases:

>100_bases
CCGATGAGGAGGCCCTGCGCCAGCACTTTTCCGATGATATTTCACGGTTGATGATCACCTGCGGTGCCGATGGCCTGCAG
GGACGGATAGAGGGGAACAT

Downstream 100 bases:

>100_bases
AGCTGCGCACCTATTCATTTCCGCTGGCGGCGACCCTGGATAGCCTGACACCGCTGGTGGCAGCGCTGCAGGAGTTTTTT
AGCGGTGCGCCATCAGACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MNLAVEKVDDLTMVSPLIRRLDASVVGVFRQNIVTLAVQGHYRLLLGFSQVDFIDRRCLGALLSRLRLLNHRCDLLLCGL
SEHILGMFCIIRMDRAFHIGTDRQQMLVLHGVWGGSP

Sequences:

>Translated_117_residues
MNLAVEKVDDLTMVSPLIRRLDASVVGVFRQNIVTLAVQGHYRLLLGFSQVDFIDRRCLGALLSRLRLLNHRCDLLLCGL
SEHILGMFCIIRMDRAFHIGTDRQQMLVLHGVWGGSP
>Mature_117_residues
MNLAVEKVDDLTMVSPLIRRLDASVVGVFRQNIVTLAVQGHYRLLLGFSQVDFIDRRCLGALLSRLRLLNHRCDLLLCGL
SEHILGMFCIIRMDRAFHIGTDRQQMLVLHGVWGGSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13227; Mature: 13227

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLAVEKVDDLTMVSPLIRRLDASVVGVFRQNIVTLAVQGHYRLLLGFSQVDFIDRRCLG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEECHHHHHHHHHHHH
ALLSRLRLLNHRCDLLLCGLSEHILGMFCIIRMDRAFHIGTDRQQMLVLHGVWGGSP
HHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCEEECCCCCHHEEEEEECCCCCC
>Mature Secondary Structure
MNLAVEKVDDLTMVSPLIRRLDASVVGVFRQNIVTLAVQGHYRLLLGFSQVDFIDRRCLG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEECHHHHHHHHHHHH
ALLSRLRLLNHRCDLLLCGLSEHILGMFCIIRMDRAFHIGTDRQQMLVLHGVWGGSP
HHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCEEECCCCCHHEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA