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The map label for this gene is ybdN [H]

Identifier: 238920862

GI number: 238920862

Start: 2877183

End: 2878394

Strand: Reverse

Name: ybdN [H]

Synonym: NT01EI_2988

Alternate gene names: 238920862

Gene position: 2878394-2877183 (Counterclockwise)

Preceding gene: 238920863

Following gene: 238920861

Centisome position: 75.5

GC content: 56.27

Gene sequence:

>1212_bases
ATGAAAAAGATCCCGCTGAAAGAGAATGTCTTCGTTGCTGCCTATGCCCGGATGAACTGGGTATTTGATACTTTTCCCCG
GGTGTGCGTTTCATTTTCAGGCGGCAAGGATTCTACCGTTTTATTGCATATCGCTGCCGAGGTCGCGCGTAGGAAAAAGC
GCCGTATCTTCGTTCTGTTCGTCGATTGGGAGGTGCAGTTCAACCATACCATCCAGCATATCGAGAGTATGCGCCAGCGC
TATCAGGATGTTATTGAGCGTTTCTTTTGGGTGGCGCTGCCGCTGACCACGGCCAGCGGGGTATCACAATATGAAACGGA
GTGGACCTGCTGGCAGCCGGGGGTGACGTGGGTACGTCAACCGCCGCCGGACGCCATCACTGCTCCGGCCTTCTTTCCGT
TTTATACGCCGGGTATTAGCTTCGAAGCGTTTGTGGTGGCCTTTTCCCTCTGGTTATCGGGGCGTAAGAGTATGGCGACG
CTGGTGGGGATCCGCGCCGATGAATCCCTGAACCGTTTTATGGCGGTGGCCTCGCAAAGCAAGCTGCGCTACGACGTTGA
CAAACCCTGGACTACCGCCTCTCAGGATGGCTTCTACTATACCGCCTATCCGCTGTATGACTGGAAGGTCAGCGATATCT
GGCATTTTAACGCGCAGCAGCGTCTGCCTTACAACCCGCTGTATGATCTGATGTATCGCGCCGGGGTGCCGCTGCGTCAG
ATGCGTATCTGTGAGCCTTTTGGCCCTGAGCAGCGTAAGGGGCTGTGGCTGTATCACGTGCTGGAGCCGACGACCTGGTG
GCGAGCCTGCTCCCGGGTAGCCGGTGCCAACGGTGGCGCCATCTACGCCAATCAGAGCGGGGCGTTTTATGCCCTTAACC
GGCAGATCGACAAGCCGCCCCAGCACACCTGGAAGAGCTATGTCCACTATCTGTTAGCCAGCATGCCGCAGAAAACGGCG
GAGCATTACCGCAATAAGATCGCCATTTACCTGCGCTGGTATCAGCAACACGGTTACCCACAGGATATCCCCGACAGCCA
GGAGAGCGATTTGGGCGCCCGGGATATTCCCTCGTGGCGCCGGATTTGCAAGACCCTGATCAAAAATGACTTCTGGTGCC
GATCGCTGTCCTTCAGCCCCAATCGGCCACAGGCCTACGAGCGCTACGTTAAGCGGATACAGCAAAAGCGCCATCAATGG
GAGATTATTTGA

Upstream 100 bases:

>100_bases
AAACGTTGACGTTGCGGTGGTATTTAATTTTAATATATTAATTATGTTAAGCGTGGTATTCATCCTAATAATATATAAAT
ATTAATTATATAGAGAAAAT

Downstream 100 bases:

>100_bases
GATGACTCTGGAAGCCCTGGAGCAGGCACTGATCGACCTGCTTGAATCCCAGTCGGAGACAGCGCAGCGCGTCGCGCTGC
TTAACCGGCTGCGTACGTTG

Product: Phosphoadenosine phosphosulfate reductase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MKKIPLKENVFVAAYARMNWVFDTFPRVCVSFSGGKDSTVLLHIAAEVARRKKRRIFVLFVDWEVQFNHTIQHIESMRQR
YQDVIERFFWVALPLTTASGVSQYETEWTCWQPGVTWVRQPPPDAITAPAFFPFYTPGISFEAFVVAFSLWLSGRKSMAT
LVGIRADESLNRFMAVASQSKLRYDVDKPWTTASQDGFYYTAYPLYDWKVSDIWHFNAQQRLPYNPLYDLMYRAGVPLRQ
MRICEPFGPEQRKGLWLYHVLEPTTWWRACSRVAGANGGAIYANQSGAFYALNRQIDKPPQHTWKSYVHYLLASMPQKTA
EHYRNKIAIYLRWYQQHGYPQDIPDSQESDLGARDIPSWRRICKTLIKNDFWCRSLSFSPNRPQAYERYVKRIQQKRHQW
EII

Sequences:

>Translated_403_residues
MKKIPLKENVFVAAYARMNWVFDTFPRVCVSFSGGKDSTVLLHIAAEVARRKKRRIFVLFVDWEVQFNHTIQHIESMRQR
YQDVIERFFWVALPLTTASGVSQYETEWTCWQPGVTWVRQPPPDAITAPAFFPFYTPGISFEAFVVAFSLWLSGRKSMAT
LVGIRADESLNRFMAVASQSKLRYDVDKPWTTASQDGFYYTAYPLYDWKVSDIWHFNAQQRLPYNPLYDLMYRAGVPLRQ
MRICEPFGPEQRKGLWLYHVLEPTTWWRACSRVAGANGGAIYANQSGAFYALNRQIDKPPQHTWKSYVHYLLASMPQKTA
EHYRNKIAIYLRWYQQHGYPQDIPDSQESDLGARDIPSWRRICKTLIKNDFWCRSLSFSPNRPQAYERYVKRIQQKRHQW
EII
>Mature_403_residues
MKKIPLKENVFVAAYARMNWVFDTFPRVCVSFSGGKDSTVLLHIAAEVARRKKRRIFVLFVDWEVQFNHTIQHIESMRQR
YQDVIERFFWVALPLTTASGVSQYETEWTCWQPGVTWVRQPPPDAITAPAFFPFYTPGISFEAFVVAFSLWLSGRKSMAT
LVGIRADESLNRFMAVASQSKLRYDVDKPWTTASQDGFYYTAYPLYDWKVSDIWHFNAQQRLPYNPLYDLMYRAGVPLRQ
MRICEPFGPEQRKGLWLYHVLEPTTWWRACSRVAGANGGAIYANQSGAFYALNRQIDKPPQHTWKSYVHYLLASMPQKTA
EHYRNKIAIYLRWYQQHGYPQDIPDSQESDLGARDIPSWRRICKTLIKNDFWCRSLSFSPNRPQAYERYVKRIQQKRHQW
EII

Specific function: Unknown

COG id: COG3969

COG function: function code R; Predicted phosphoadenosine phosphosulfate sulfotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786818, Length=401, Percent_Identity=58.1047381546135, Blast_Score=504, Evalue=1e-144,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021845
- InterPro:   IPR002500
- InterPro:   IPR014729 [H]

Pfam domain/function: PF11922 DUF3440; PF01507 PAPS_reduct [H]

EC number: NA

Molecular weight: Translated: 47492; Mature: 47492

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIPLKENVFVAAYARMNWVFDTFPRVCVSFSGGKDSTVLLHIAAEVARRKKRRIFVLF
CCCCCCCCCEEEEEEHHHHHHHHHHHHHHEEECCCCCCEEEEHHHHHHHHHHCCEEEEEE
VDWEVQFNHTIQHIESMRQRYQDVIERFFWVALPLTTASGVSQYETEWTCWQPGVTWVRQ
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCEEECCCCCCCCC
PPPDAITAPAFFPFYTPGISFEAFVVAFSLWLSGRKSMATLVGIRADESLNRFMAVASQS
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHEEECCCHHHHHHHHHHHCC
KLRYDVDKPWTTASQDGFYYTAYPLYDWKVSDIWHFNAQQRLPYNPLYDLMYRAGVPLRQ
CEEEECCCCCCCCCCCCEEEEEEEEEECEECCEEECCCCCCCCCCHHHHHHHHCCCCHHH
MRICEPFGPEQRKGLWLYHVLEPTTWWRACSRVAGANGGAIYANQSGAFYALNRQIDKPP
HHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCCH
QHTWKSYVHYLLASMPQKTAEHYRNKIAIYLRWYQQHGYPQDIPDSQESDLGARDIPSWR
HHHHHHHHHHHHHHCCHHHHHHHHCEEEEEEEEEHHCCCCCCCCCCCCCCCCCCCCHHHH
RICKTLIKNDFWCRSLSFSPNRPQAYERYVKRIQQKRHQWEII
HHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKIPLKENVFVAAYARMNWVFDTFPRVCVSFSGGKDSTVLLHIAAEVARRKKRRIFVLF
CCCCCCCCCEEEEEEHHHHHHHHHHHHHHEEECCCCCCEEEEHHHHHHHHHHCCEEEEEE
VDWEVQFNHTIQHIESMRQRYQDVIERFFWVALPLTTASGVSQYETEWTCWQPGVTWVRQ
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCEEECCCCCCCCC
PPPDAITAPAFFPFYTPGISFEAFVVAFSLWLSGRKSMATLVGIRADESLNRFMAVASQS
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHEEECCCHHHHHHHHHHHCC
KLRYDVDKPWTTASQDGFYYTAYPLYDWKVSDIWHFNAQQRLPYNPLYDLMYRAGVPLRQ
CEEEECCCCCCCCCCCCEEEEEEEEEECEECCEEECCCCCCCCCCHHHHHHHHCCCCHHH
MRICEPFGPEQRKGLWLYHVLEPTTWWRACSRVAGANGGAIYANQSGAFYALNRQIDKPP
HHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCEEEECCCCCEEEECCCCCCCH
QHTWKSYVHYLLASMPQKTAEHYRNKIAIYLRWYQQHGYPQDIPDSQESDLGARDIPSWR
HHHHHHHHHHHHHHCCHHHHHHHHCEEEEEEEEEHHCCCCCCCCCCCCCCCCCCCCHHHH
RICKTLIKNDFWCRSLSFSPNRPQAYERYVKRIQQKRHQWEII
HHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]