| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is pgm [H]
Identifier: 238920774
GI number: 238920774
Start: 2784825
End: 2786465
Strand: Reverse
Name: pgm [H]
Synonym: NT01EI_2893
Alternate gene names: 238920774
Gene position: 2786465-2784825 (Counterclockwise)
Preceding gene: 238920775
Following gene: 238920768
Centisome position: 73.09
GC content: 63.13
Gene sequence:
>1641_bases ATGGCAAATCACCCGCGTGCCGGGCAGCCCGCCCGACAGAGCGATTTGATCAATGTGGCTCAGCTGGCTGCACAGTATTA CAGCCTGCGTCCGCAGGCGGATAATCCGTCCCACGCCGTGAAGTTCGGCACCTCAGGTCACCGCGGCAGCGCACAGCGCC AAAGCTTCAACGAGGCGCACATTCTGGCGATCGCCCAGGCGATTGCCGAGGTGCGTAAGGCCAATGGCGTCGAGGGGCCC TGCTTTGTCGGTAAAGATACCCATGCGCTCTCTGAGCCGGCCTTCATCAGCGTGCTGGAGGTGCTGAGTGCCAACGGTGT TGCGGTGGTGGTGCAGGAGAGCAATGGCTTTACCCCGACGCCGGCGGTGTCACATGCCATTCTGACCCATAACCGTCGCG GCGGCGCGCTGGCCGACGGTATTGTGATTACGCCCTCCCATAACCCGCCTGAAGATGGTGGCATCAAATACAACCCGACC AACGGCGGCCCAGCGGATACCAATCTGACCAGCGTTATCGAGCAGCGTGCCAACCAGCTGCTGGCGCAGGAGCTGGCCGG TGTGAAACGTCTGACGCTGGAGGCGGCCTGGCGCAGCGGCCATATCCATGCGCGCGACCTGGTGCAGCCCTACGTCGAGG ATCTGCGCGATATCGTCGATATGCCAGCGATTCAGCGCGCCGGTCTGACGCTGGGCGTCGATCCGCTTGGCGGCTCCGGT ATCGAATACTGGCAGCGCATCGGCGAGCATTACGGCCTGGATTTGACGCTGGTCAACGACCATATCGATCAGACCTTCCG CTTTATGCATCTGGACCACGACGGCGTGATCCGCATGGACTGCTCTTCAGAAAGTGCCATGGCGGGGCTGCTGGCGCTGC GCGATCGCTTCGACCTGGCCTTTGCCAATGACCCGGACTACGACCGTCACGGCATCGTAACGCCGACCGGGCTGATGAAC CCGAACCACTATCTGGCCGTGGCCATTGACTACCTGTTCCGCCACCGTCCGCAGTGGGGGGCCGAGGTGGCTGTGGGTAA GACGCTGGTCTCCAGCGCGATGATCGATCGGGTGGTTAAGGCGCTGGATCGCCGTCTGGTGGAAGTGCCGGTCGGTTTCA AGTGGTTTGTCGACGGCCTGTTTGACGGCAGCCTCGGCTTTGGCGGTGAAGAGAGCGCCGGGGCATCGTTCCTACGCTTC AACGGTACGCCGTGGTCCACCGATAAGGATGGCATCATCCTGTGCCTGCTGGCGGCCGAGATCACCGCCCAGACCGGTAA GAATCCGCAGCAGCACTACGATGCGCTGGCAGCGCGCTTTGGCTCGCCGAGCTATAACCGCCTGCAGGCGCCGGCGACCC ATGCCCAGAAGGCGGCGCTCTCCCGCCTCTCTCCGGAGATGGTGCAGGCAGACCGGCTGGCGGGTGATCCGATCACCGCG CGCCTGACCCGCGCCCCGGGCAATGATGCGCCGATCGGCGGGCTGAAGATCATGACCGACAACGGCTGGTTTGCCGCGCG TCCCTCCGGCACCGAGGAGGCCTACAAGATCTACTGTGAAAGCTTCTTGGGGGCGGAACATCGCCAGCGTATCGAGAAAG AGGCGGTCGATATTGTGAGCGCCGTACTGACTAACGCTTAA
Upstream 100 bases:
>100_bases TGGTCGAACACATCATGCTGGCGATGCAGTTCCCCATGGAGCTGATCGAGAAGGTTTGCGGCACCATTTGATAAATAACA AGCGTTAGGGAGAAGCGCAG
Downstream 100 bases:
>100_bases GCGCGTCATTATCCACCGCAACGCCGCGCACTGCGCGGCGTTTTTTGTCGATGGAAAACCCCCAGCTAGGCTGGGGGTTC CGGAAAGCTCTCAGCTTTGA
Product: phosphoglucomutase
Products: NA
Alternate protein names: PGM; Glucose phosphomutase [H]
Number of amino acids: Translated: 546; Mature: 545
Protein sequence:
>546_residues MANHPRAGQPARQSDLINVAQLAAQYYSLRPQADNPSHAVKFGTSGHRGSAQRQSFNEAHILAIAQAIAEVRKANGVEGP CFVGKDTHALSEPAFISVLEVLSANGVAVVVQESNGFTPTPAVSHAILTHNRRGGALADGIVITPSHNPPEDGGIKYNPT NGGPADTNLTSVIEQRANQLLAQELAGVKRLTLEAAWRSGHIHARDLVQPYVEDLRDIVDMPAIQRAGLTLGVDPLGGSG IEYWQRIGEHYGLDLTLVNDHIDQTFRFMHLDHDGVIRMDCSSESAMAGLLALRDRFDLAFANDPDYDRHGIVTPTGLMN PNHYLAVAIDYLFRHRPQWGAEVAVGKTLVSSAMIDRVVKALDRRLVEVPVGFKWFVDGLFDGSLGFGGEESAGASFLRF NGTPWSTDKDGIILCLLAAEITAQTGKNPQQHYDALAARFGSPSYNRLQAPATHAQKAALSRLSPEMVQADRLAGDPITA RLTRAPGNDAPIGGLKIMTDNGWFAARPSGTEEAYKIYCESFLGAEHRQRIEKEAVDIVSAVLTNA
Sequences:
>Translated_546_residues MANHPRAGQPARQSDLINVAQLAAQYYSLRPQADNPSHAVKFGTSGHRGSAQRQSFNEAHILAIAQAIAEVRKANGVEGP CFVGKDTHALSEPAFISVLEVLSANGVAVVVQESNGFTPTPAVSHAILTHNRRGGALADGIVITPSHNPPEDGGIKYNPT NGGPADTNLTSVIEQRANQLLAQELAGVKRLTLEAAWRSGHIHARDLVQPYVEDLRDIVDMPAIQRAGLTLGVDPLGGSG IEYWQRIGEHYGLDLTLVNDHIDQTFRFMHLDHDGVIRMDCSSESAMAGLLALRDRFDLAFANDPDYDRHGIVTPTGLMN PNHYLAVAIDYLFRHRPQWGAEVAVGKTLVSSAMIDRVVKALDRRLVEVPVGFKWFVDGLFDGSLGFGGEESAGASFLRF NGTPWSTDKDGIILCLLAAEITAQTGKNPQQHYDALAARFGSPSYNRLQAPATHAQKAALSRLSPEMVQADRLAGDPITA RLTRAPGNDAPIGGLKIMTDNGWFAARPSGTEEAYKIYCESFLGAEHRQRIEKEAVDIVSAVLTNA >Mature_545_residues ANHPRAGQPARQSDLINVAQLAAQYYSLRPQADNPSHAVKFGTSGHRGSAQRQSFNEAHILAIAQAIAEVRKANGVEGPC FVGKDTHALSEPAFISVLEVLSANGVAVVVQESNGFTPTPAVSHAILTHNRRGGALADGIVITPSHNPPEDGGIKYNPTN GGPADTNLTSVIEQRANQLLAQELAGVKRLTLEAAWRSGHIHARDLVQPYVEDLRDIVDMPAIQRAGLTLGVDPLGGSGI EYWQRIGEHYGLDLTLVNDHIDQTFRFMHLDHDGVIRMDCSSESAMAGLLALRDRFDLAFANDPDYDRHGIVTPTGLMNP NHYLAVAIDYLFRHRPQWGAEVAVGKTLVSSAMIDRVVKALDRRLVEVPVGFKWFVDGLFDGSLGFGGEESAGASFLRFN GTPWSTDKDGIILCLLAAEITAQTGKNPQQHYDALAARFGSPSYNRLQAPATHAQKAALSRLSPEMVQADRLAGDPITAR LTRAPGNDAPIGGLKIMTDNGWFAARPSGTEEAYKIYCESFLGAEHRQRIEKEAVDIVSAVLTNA
Specific function: This enzyme participates in both the breakdown and synthesis of glucose [H]
COG id: COG0033
COG function: function code G; Phosphoglucomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI290463102, Length=467, Percent_Identity=27.1948608137045, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI21361621, Length=457, Percent_Identity=27.7899343544858, Blast_Score=92, Evalue=1e-18, Organism=Escherichia coli, GI1786904, Length=546, Percent_Identity=82.051282051282, Blast_Score=923, Evalue=0.0, Organism=Caenorhabditis elegans, GI17535441, Length=549, Percent_Identity=26.5938069216758, Blast_Score=99, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6323752, Length=461, Percent_Identity=26.4642082429501, Blast_Score=101, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6322722, Length=539, Percent_Identity=27.4582560296846, Blast_Score=97, Evalue=6e-21, Organism=Drosophila melanogaster, GI17864244, Length=439, Percent_Identity=26.1958997722096, Blast_Score=96, Evalue=7e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005852 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 59001; Mature: 58870
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANHPRAGQPARQSDLINVAQLAAQYYSLRPQADNPSHAVKFGTSGHRGSAQRQSFNEAH CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHCCCHHH ILAIAQAIAEVRKANGVEGPCFVGKDTHALSEPAFISVLEVLSANGVAVVVQESNGFTPT HHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCC PAVSHAILTHNRRGGALADGIVITPSHNPPEDGGIKYNPTNGGPADTNLTSVIEQRANQL HHHHHHHHHCCCCCCCEECCEEECCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHH LAQELAGVKRLTLEAAWRSGHIHARDLVQPYVEDLRDIVDMPAIQRAGLTLGVDPLGGSG HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCEEECCCCCCCH IEYWQRIGEHYGLDLTLVNDHIDQTFRFMHLDHDGVIRMDCSSESAMAGLLALRDRFDLA HHHHHHHHHHHCCEEEEECHHHHHHEEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCEE FANDPDYDRHGIVTPTGLMNPNHYLAVAIDYLFRHRPQWGAEVAVGKTLVSSAMIDRVVK ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH ALDRRLVEVPVGFKWFVDGLFDGSLGFGGEESAGASFLRFNGTPWSTDKDGIILCLLAAE HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEHHH ITAQTGKNPQQHYDALAARFGSPSYNRLQAPATHAQKAALSRLSPEMVQADRLAGDPITA HHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCEE RLTRAPGNDAPIGGLKIMTDNGWFAARPSGTEEAYKIYCESFLGAEHRQRIEKEAVDIVS EEEECCCCCCCCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH AVLTNA HHHHCC >Mature Secondary Structure ANHPRAGQPARQSDLINVAQLAAQYYSLRPQADNPSHAVKFGTSGHRGSAQRQSFNEAH CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHCCCHHH ILAIAQAIAEVRKANGVEGPCFVGKDTHALSEPAFISVLEVLSANGVAVVVQESNGFTPT HHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCC PAVSHAILTHNRRGGALADGIVITPSHNPPEDGGIKYNPTNGGPADTNLTSVIEQRANQL HHHHHHHHHCCCCCCCEECCEEECCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHH LAQELAGVKRLTLEAAWRSGHIHARDLVQPYVEDLRDIVDMPAIQRAGLTLGVDPLGGSG HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCEEECCCCCCCH IEYWQRIGEHYGLDLTLVNDHIDQTFRFMHLDHDGVIRMDCSSESAMAGLLALRDRFDLA HHHHHHHHHHHCCEEEEECHHHHHHEEEEEECCCCEEEEECCCCHHHHHHHHHHHHCCEE FANDPDYDRHGIVTPTGLMNPNHYLAVAIDYLFRHRPQWGAEVAVGKTLVSSAMIDRVVK ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH ALDRRLVEVPVGFKWFVDGLFDGSLGFGGEESAGASFLRFNGTPWSTDKDGIILCLLAAE HHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEHHH ITAQTGKNPQQHYDALAARFGSPSYNRLQAPATHAQKAALSRLSPEMVQADRLAGDPITA HHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCEE RLTRAPGNDAPIGGLKIMTDNGWFAARPSGTEEAYKIYCESFLGAEHRQRIEKEAVDIVS EEEECCCCCCCCCCEEEEECCCEEEECCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH AVLTNA HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8083177; 8905232; 9278503; 8011018 [H]