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The map label for this gene is cpdP [H]

Identifier: 238920765

GI number: 238920765

Start: 2771959

End: 2772975

Strand: Reverse

Name: cpdP [H]

Synonym: NT01EI_2884

Alternate gene names: 238920765

Gene position: 2772975-2771959 (Counterclockwise)

Preceding gene: 238920766

Following gene: 238920764

Centisome position: 72.74

GC content: 65.0

Gene sequence:

>1017_bases
ATGATGCAGAGGATGTGGCGCAGATGGGTGGCCGGCGGCGCGCTGCTGTGCGGCCTGACAATGTGCCCCGCGCAGGCCGC
GTTTGAGCTGGTGGCGTTGGGCAGCGGCGGCGGACTGAGCGGTGATAACCTGAACGCCTATCTTATCCGCCATGAGCGCG
ATGAGCGCTATGTTGCGCTGGACGCGGGTAGCACTCTGCCGGGGATCGCCCGGGCGCTGGCGCTGGGGGCGTTTCCCTCA
GTAAACTCAGAGCGTGCTGCGCCCTGGACGCCGCAGGGCTACGTGCTGAGAGAGCTCATCGCCGCCTACTTCATCAGCCA
TCCCCATTTGGATCACGTCGCTGGCCTGCTACTGGCGGCGCCGGAGGATAGCCATAAACCGATTTACACTCTGGCGGACA
GCGCCGATACCCTGCGCAATCACTATTTTAACTGGAAGAGCTGGCCGAACTTCAGCGATGCCGGGCAAGGGCAGCGGCTG
GGCACCTACCGGATCTACAGCGTTCGCCCGGAGCAGCGCTTTACGCTGGGCGTCAGCGGTCTGCGCGGGGTGGTCTACCC
CCTCAGCCACGGCGGAGAGACGTCGTCGATGATCCTGCTGGAGCGGGAGGGGGAGTTCGTTGCGTACTTTGGCGACACCG
GTGCCGATCGGGTCGAGAACAGCCAGCGCTTGGACCACATCTGGCGCCGACTGGGGCCGCTGGTGGTCAGTAAGGCGCTA
AAGGGGATCATCATAGAGACCTCCTTCAGCGACGAGACGCCCGAGACGCAGCTGTTTGGGCACCTGACCCCGGCGCTGCT
GAATCAGGAGATGATCAATCTGTCCCGCTACAGCGGTGGTGAAGCGGCGCTGGCGGGGCTGCCGGTGGTGATATCGCATA
TCAAGCCATCGCTGCGGGCCGGTGTCGCGGCGGAGCAGCAGATCATGGCACAGCTGGTGGCCGGGAATCGCAGCGGCGTG
GCGTTTCGCTATTTGCGCCAGGGGGAGCGGGCGCGGTTTGCCGGAGGGGAGGAGTAG

Upstream 100 bases:

>100_bases
GCAGGACACGCTGTTGGCCTTTGCCCGCGCCCGCGCCGGGGACGACGGCGCGGCATGAGGCGCAGGCGCCGCAGCGTGGC
AGAGACAGGGAGAGTGGCAG

Downstream 100 bases:

>100_bases
CGTATTATCCGCAAAACGATCGATGATGGCGGCAGGCGCCTGCCCGGGAGAACTCATGGATAATTTGGTTTTGGAGCAGC
GGATTAACCGGTTGCTTGAC

Product: 3',5'-cyclic-nucleotide phosphodiesterase

Products: NA

Alternate protein names: 3':5'-CNP; PDEase [H]

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MMQRMWRRWVAGGALLCGLTMCPAQAAFELVALGSGGGLSGDNLNAYLIRHERDERYVALDAGSTLPGIARALALGAFPS
VNSERAAPWTPQGYVLRELIAAYFISHPHLDHVAGLLLAAPEDSHKPIYTLADSADTLRNHYFNWKSWPNFSDAGQGQRL
GTYRIYSVRPEQRFTLGVSGLRGVVYPLSHGGETSSMILLEREGEFVAYFGDTGADRVENSQRLDHIWRRLGPLVVSKAL
KGIIIETSFSDETPETQLFGHLTPALLNQEMINLSRYSGGEAALAGLPVVISHIKPSLRAGVAAEQQIMAQLVAGNRSGV
AFRYLRQGERARFAGGEE

Sequences:

>Translated_338_residues
MMQRMWRRWVAGGALLCGLTMCPAQAAFELVALGSGGGLSGDNLNAYLIRHERDERYVALDAGSTLPGIARALALGAFPS
VNSERAAPWTPQGYVLRELIAAYFISHPHLDHVAGLLLAAPEDSHKPIYTLADSADTLRNHYFNWKSWPNFSDAGQGQRL
GTYRIYSVRPEQRFTLGVSGLRGVVYPLSHGGETSSMILLEREGEFVAYFGDTGADRVENSQRLDHIWRRLGPLVVSKAL
KGIIIETSFSDETPETQLFGHLTPALLNQEMINLSRYSGGEAALAGLPVVISHIKPSLRAGVAAEQQIMAQLVAGNRSGV
AFRYLRQGERARFAGGEE
>Mature_338_residues
MMQRMWRRWVAGGALLCGLTMCPAQAAFELVALGSGGGLSGDNLNAYLIRHERDERYVALDAGSTLPGIARALALGAFPS
VNSERAAPWTPQGYVLRELIAAYFISHPHLDHVAGLLLAAPEDSHKPIYTLADSADTLRNHYFNWKSWPNFSDAGQGQRL
GTYRIYSVRPEQRFTLGVSGLRGVVYPLSHGGETSSMILLEREGEFVAYFGDTGADRVENSQRLDHIWRRLGPLVVSKAL
KGIIIETSFSDETPETQLFGHLTPALLNQEMINLSRYSGGEAALAGLPVVISHIKPSLRAGVAAEQQIMAQLVAGNRSGV
AFRYLRQGERARFAGGEE

Specific function: Unknown

COG id: COG5212

COG function: function code T; Low-affinity cAMP phosphodiesterase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cAMP phosphodiesterase class-II family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6321189, Length=292, Percent_Identity=25, Blast_Score=86, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000396 [H]

Pfam domain/function: PF02112 PDEase_II [H]

EC number: =3.1.4.17 [H]

Molecular weight: Translated: 36933; Mature: 36933

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQRMWRRWVAGGALLCGLTMCPAQAAFELVALGSGGGLSGDNLNAYLIRHERDERYVAL
CCHHHHHHHHCCCHHHHHHHHCCHHHHEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEE
DAGSTLPGIARALALGAFPSVNSERAAPWTPQGYVLRELIAAYFISHPHLDHVAGLLLAA
ECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHEEEC
PEDSHKPIYTLADSADTLRNHYFNWKSWPNFSDAGQGQRLGTYRIYSVRPEQRFTLGVSG
CCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCC
LRGVVYPLSHGGETSSMILLEREGEFVAYFGDTGADRVENSQRLDHIWRRLGPLVVSKAL
CCCEEEECCCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KGIIIETSFSDETPETQLFGHLTPALLNQEMINLSRYSGGEAALAGLPVVISHIKPSLRA
CCEEEEECCCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHH
GVAAEQQIMAQLVAGNRSGVAFRYLRQGERARFAGGEE
CCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MMQRMWRRWVAGGALLCGLTMCPAQAAFELVALGSGGGLSGDNLNAYLIRHERDERYVAL
CCHHHHHHHHCCCHHHHHHHHCCHHHHEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEE
DAGSTLPGIARALALGAFPSVNSERAAPWTPQGYVLRELIAAYFISHPHLDHVAGLLLAA
ECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHEEEC
PEDSHKPIYTLADSADTLRNHYFNWKSWPNFSDAGQGQRLGTYRIYSVRPEQRFTLGVSG
CCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCC
LRGVVYPLSHGGETSSMILLEREGEFVAYFGDTGADRVENSQRLDHIWRRLGPLVVSKAL
CCCEEEECCCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KGIIIETSFSDETPETQLFGHLTPALLNQEMINLSRYSGGEAALAGLPVVISHIKPSLRA
CCEEEEECCCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHH
GVAAEQQIMAQLVAGNRSGVAFRYLRQGERARFAGGEE
CCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]