| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is galM [H]
Identifier: 238920731
GI number: 238920731
Start: 2735891
End: 2736943
Strand: Direct
Name: galM [H]
Synonym: NT01EI_2844
Alternate gene names: 238920731
Gene position: 2735891-2736943 (Clockwise)
Preceding gene: 238920730
Following gene: 238920733
Centisome position: 71.76
GC content: 67.05
Gene sequence:
>1053_bases ATGCTAACCCCAGCGCCACAGTATGAGACCGCGCCGGACGGCGCCCCCTTTCAGTTCACCGCGCTGCACAACGCCCGGGG CAGCACGCTGCTGCTGATGGACTGGGGAGCAACCTGGCTCTCCTGTCGCCTGGCGCTGCCCGGCGGGCAGGCGCGCGAGG TGCTGCTCGGCTGCCAGCGCGCCGGGCAATACCCGCAGCAGCAGGCCTTTCTGGGCGCCACCGTGGGACGCTATGCCAAC CGGATCGCCCTCGCCCGCTACACCCGCCAGGGGAAAACCGTCGTACTGCAGCCCAGCCAGAGCGTCAATCAACTGCACGG CGGACCGCAAGGGTTTGACAAGTGCCGCTGGCAGCGGGTCGCCTGCGATGCGCGATCGGTGACCTACCGGCTGGACTCAC CCGACGGCGATCAGGGCTATCCCGGCAACCTGAGGGTAGAGACCCGCTATGCCCTCAGCGACGACGATCGGGTCGAGATC CGCTGGCAGGCCAGCGTCGATCGCGCCTGCCCGGTCTGTCTGACCAACCATGCCTACTTTAATCTGGACGGCGAGGCGCA GACCGATGCGCTGGCGCAGCGCCTGCAGCTGAACGCCGATCGCTACCTGCCGGTGGATGAGGCAGGGATCCCCTGCGCAC CGCTGACCGACGTGTCAGGCAGCGGAATGGACTTTCGCCAGGCCAAACGGTTGGGGCAGGATCTGCTCAGGGATGCCGAC CAGCAGCGAGCTAAGGGCTATGACCACGCCTATCTGCTGCAGGCGCGCTGCGCCGACGGCGCCTATCCCGCCGCCGTACT GAGCGCCGCCGATGGCCGGGTTAGCCTACGGCTGTACACCAACGCTCCGGCACTGCAGCTCTACAGCGGGAATTTCCTTG CAGGCACCCCCGACCGCCGCGGTGGCCACTATGCCGACTATGCCGGCGTGGCGCTGGAGAGCGAGTTTTTACCCGACAGC CCCAACCATCCGGAATGGCCACAGCCCGACTGCATGCTGCAGCCCGGCGAGACCTACCGGGCTTTTACCCACTATCAGTT CAGACTGCGCTGA
Upstream 100 bases:
>100_bases TGGTCGAGCCGGTACGCGCCGCCGTCGCCCGTGACTACGCTGGCCGTACCGGCCTGAAGGAAACTTTTTACGTCTGTCAG CCCTCGGCGGGAGCCAGCGT
Downstream 100 bases:
>100_bases GAGCTACCACCGCGCGCGACGGCACATCCGTCCGCGCGGTGATGGCAGGCTCGGGGCACCTCAGCGCCAGAAGAACCAGG CGAACAGGCTGAGTGCAACG
Product: galactose mutarotase
Products: NA
Alternate protein names: Galactose mutarotase; Type-1 mutarotase [H]
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MLTPAPQYETAPDGAPFQFTALHNARGSTLLLMDWGATWLSCRLALPGGQAREVLLGCQRAGQYPQQQAFLGATVGRYAN RIALARYTRQGKTVVLQPSQSVNQLHGGPQGFDKCRWQRVACDARSVTYRLDSPDGDQGYPGNLRVETRYALSDDDRVEI RWQASVDRACPVCLTNHAYFNLDGEAQTDALAQRLQLNADRYLPVDEAGIPCAPLTDVSGSGMDFRQAKRLGQDLLRDAD QQRAKGYDHAYLLQARCADGAYPAAVLSAADGRVSLRLYTNAPALQLYSGNFLAGTPDRRGGHYADYAGVALESEFLPDS PNHPEWPQPDCMLQPGETYRAFTHYQFRLR
Sequences:
>Translated_350_residues MLTPAPQYETAPDGAPFQFTALHNARGSTLLLMDWGATWLSCRLALPGGQAREVLLGCQRAGQYPQQQAFLGATVGRYAN RIALARYTRQGKTVVLQPSQSVNQLHGGPQGFDKCRWQRVACDARSVTYRLDSPDGDQGYPGNLRVETRYALSDDDRVEI RWQASVDRACPVCLTNHAYFNLDGEAQTDALAQRLQLNADRYLPVDEAGIPCAPLTDVSGSGMDFRQAKRLGQDLLRDAD QQRAKGYDHAYLLQARCADGAYPAAVLSAADGRVSLRLYTNAPALQLYSGNFLAGTPDRRGGHYADYAGVALESEFLPDS PNHPEWPQPDCMLQPGETYRAFTHYQFRLR >Mature_350_residues MLTPAPQYETAPDGAPFQFTALHNARGSTLLLMDWGATWLSCRLALPGGQAREVLLGCQRAGQYPQQQAFLGATVGRYAN RIALARYTRQGKTVVLQPSQSVNQLHGGPQGFDKCRWQRVACDARSVTYRLDSPDGDQGYPGNLRVETRYALSDDDRVEI RWQASVDRACPVCLTNHAYFNLDGEAQTDALAQRLQLNADRYLPVDEAGIPCAPLTDVSGSGMDFRQAKRLGQDLLRDAD QQRAKGYDHAYLLQARCADGAYPAAVLSAADGRVSLRLYTNAPALQLYSGNFLAGTPDRRGGHYADYAGVALESEFLPDS PNHPEWPQPDCMLQPGETYRAFTHYQFRLR
Specific function: Mutarotase converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose [H]
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldose epimerase family [H]
Homologues:
Organism=Homo sapiens, GI20270355, Length=320, Percent_Identity=37.5, Blast_Score=203, Evalue=2e-52, Organism=Escherichia coli, GI1786971, Length=347, Percent_Identity=57.6368876080692, Blast_Score=402, Evalue=1e-113, Organism=Caenorhabditis elegans, GI17557428, Length=332, Percent_Identity=29.2168674698795, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI115533334, Length=332, Percent_Identity=29.2168674698795, Blast_Score=156, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6319493, Length=320, Percent_Identity=24.0625, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6322004, Length=356, Percent_Identity=23.876404494382, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI24659048, Length=345, Percent_Identity=33.3333333333333, Blast_Score=176, Evalue=1e-44, Organism=Drosophila melanogaster, GI24668278, Length=336, Percent_Identity=32.7380952380952, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI24583720, Length=336, Percent_Identity=30.952380952381, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI24668282, Length=338, Percent_Identity=30.1775147928994, Blast_Score=135, Evalue=4e-32, Organism=Drosophila melanogaster, GI24641876, Length=343, Percent_Identity=26.530612244898, Blast_Score=127, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018052 - InterPro: IPR013458 - InterPro: IPR008183 - InterPro: IPR015443 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.3 [H]
Molecular weight: Translated: 38690; Mature: 38690
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTPAPQYETAPDGAPFQFTALHNARGSTLLLMDWGATWLSCRLALPGGQAREVLLGCQR CCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHH AGQYPQQQAFLGATVGRYANRIALARYTRQGKTVVLQPSQSVNQLHGGPQGFDKCRWQRV HCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCHHHHHHCCCCCCHHHHHHHHH ACDARSVTYRLDSPDGDQGYPGNLRVETRYALSDDDRVEIRWQASVDRACPVCLTNHAYF CCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCEEEECCEEE NLDGEAQTDALAQRLQLNADRYLPVDEAGIPCAPLTDVSGSGMDFRQAKRLGQDLLRDAD EECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH QQRAKGYDHAYLLQARCADGAYPAAVLSAADGRVSLRLYTNAPALQLYSGNFLAGTPDRR HHHHCCCCCEEEEEEECCCCCCCHHHEECCCCEEEEEEEECCCEEEEECCCEEECCCCCC GGHYADYAGVALESEFLPDSPNHPEWPQPDCMLQPGETYRAFTHYQFRLR CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEEEEC >Mature Secondary Structure MLTPAPQYETAPDGAPFQFTALHNARGSTLLLMDWGATWLSCRLALPGGQAREVLLGCQR CCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHH AGQYPQQQAFLGATVGRYANRIALARYTRQGKTVVLQPSQSVNQLHGGPQGFDKCRWQRV HCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCHHHHHHCCCCCCHHHHHHHHH ACDARSVTYRLDSPDGDQGYPGNLRVETRYALSDDDRVEIRWQASVDRACPVCLTNHAYF CCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCEEEECCEEE NLDGEAQTDALAQRLQLNADRYLPVDEAGIPCAPLTDVSGSGMDFRQAKRLGQDLLRDAD EECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH QQRAKGYDHAYLLQARCADGAYPAAVLSAADGRVSLRLYTNAPALQLYSGNFLAGTPDRR HHHHCCCCCEEEEEEECCCCCCCHHHEECCCCEEEEEEEECCCEEEEECCCEEECCCCCC GGHYADYAGVALESEFLPDSPNHPEWPQPDCMLQPGETYRAFTHYQFRLR CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7966338; 8905232; 9278503 [H]