The gene/protein map for NC_011896 is currently unavailable.
Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238920626

Identifier: 238920626

GI number: 238920626

Start: 2632264

End: 2633751

Strand: Direct

Name: 238920626

Synonym: NT01EI_2738

Alternate gene names: NA

Gene position: 2632264-2633751 (Clockwise)

Preceding gene: 238920625

Following gene: 238920627

Centisome position: 69.05

GC content: 55.78

Gene sequence:

>1488_bases
ATGAGCGAACAGAACTTGCCAGAAAGTGCCGCTGTCGAGAGCGCGGCTCCAGAGGACAGCCTGCTGGATAGCATCATTGC
TGAAACCCGGATGGCACGCAGTGACCTGGAGAGAGAGCGGGCGCGGGACCTGTTGGGGGAATGGGTAAGTGAGGTTCTGT
CGGGAACGGTGACAGTTTCCGGTGACGTACTGGCCAGTATTGAGGCACGTATTGCCCAGATCGATGCGCTGCTCTCCGCC
CAGCTGTCCACCATTATGCATGAGCCGGCTTTCCAAAAGCTGGAAGGGTCATGGCGTGGACTGCATTACCTGGTACATCA
AAGCGAAACCGGTACCGGCCTGAAAATCCGCATGCTGAATGTCAGCCGAAAAGATCTGATCCGCGACTTTAAGAGTGCCG
CCGAGTTTGATCAGAGCGCCCTGTTCAAGAAAGTCTATGAGGAGGAGTACGGCACCTTTGGTGGTGCCCCCTTTGCAGCC
ATGATCGGGGATTATGAGTTCAGCAACCACCCGGAGGATCTGTTTCTGCTGGAGGAGATCTCACACGTTGCGGCGGCAGC
CCATGCTCCCTTCCTCTCTGCCGCCAGCGCAGGAATGTTCGGACTGGATAGCCTGACAGAGCTGTCGATCCCCAGGGATC
TGGCCAAAGGCTTTGATACGGTTGAGTATGCCAAGTGGAAATCGCTGCGCCAGTCGGAGGATGCCCGCTATATCGCCCTG
GCCCTGCCCCACGTGCTTGGCCGACTGCCTTACGGTGCCGCGACGGTACCGGTAGAGGCATTCAATTTTGAGGAAGATGT
CAACGGCAAGGAGCATGGCAAATATCTGTGGCTGAATGCGGCCTATGCGCTGGGTACCCGCCTGACTCAGGCCTATGCCA
AATATGGCTGGTGCGCCGCCATCCGGGGAGTCGAAGGAGGTGGTCTGGTGGAGGGACTGCCGGCGCACACCTTTACTACC
GATGATGGCGAAGTAGAGCTCAAGTGTCCCACCGAAGTGGCCATTACCGATCGCCGGGAGAAAGAGTTGGCCGACCTGGG
ATTTATCGCCCTGACCCACTGTAAGGGTACCGACTATGCCGCATTCTTTTCGACCCAGTCGGCACAAAAGCCCAAGGAAT
ATGACAGTGACTCAGCTAATGCCAACGCCAGGATCGCCTGCCAGCTGCAATATATTATGGCCACCTCGCGCTTTGCCCAT
TATTTAAAATCGATGGTCCGCGACAAGCTCGGCAGCTTTATGAGCCGTAGCGAATGTGAATACTTTCTCAATCAGTGGAT
CAGTAATTATGTGGTCGGTTCAGATGATGCAGGCCAGGATATTAAGGCGAAATACCCATTACGGGAAGCCCGTATTGATG
TCAGCGATATTCCAGGTAAACCGGGGTTCTATAAGGCAGTGGCCTATTTAAAACCCCATTTCCAGCTGGAGGGGCTGACC
GCATCTTTACGTTTGGTCGCCGATCTGCCGCCACCGGCGCAAGGCTAA

Upstream 100 bases:

>100_bases
GCAACGAGCGCCTGGGTGAGGTATTGCAGGGCATCATTGAAGATACCGAAAAACTGCAAAATCTGGGTAAAGAGACCGGT
TTTAGTGAGGAACAGCAATA

Downstream 100 bases:

>100_bases
CTATTTAGCCGAATTTATCTATCACATATATCTAAAACACAGTTTATCTTGTCACAAGAGAGGTCCGCTATGGCTTTTGA
TACCTATATCAAACTAGATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 495; Mature: 494

Protein sequence:

>495_residues
MSEQNLPESAAVESAAPEDSLLDSIIAETRMARSDLERERARDLLGEWVSEVLSGTVTVSGDVLASIEARIAQIDALLSA
QLSTIMHEPAFQKLEGSWRGLHYLVHQSETGTGLKIRMLNVSRKDLIRDFKSAAEFDQSALFKKVYEEEYGTFGGAPFAA
MIGDYEFSNHPEDLFLLEEISHVAAAAHAPFLSAASAGMFGLDSLTELSIPRDLAKGFDTVEYAKWKSLRQSEDARYIAL
ALPHVLGRLPYGAATVPVEAFNFEEDVNGKEHGKYLWLNAAYALGTRLTQAYAKYGWCAAIRGVEGGGLVEGLPAHTFTT
DDGEVELKCPTEVAITDRREKELADLGFIALTHCKGTDYAAFFSTQSAQKPKEYDSDSANANARIACQLQYIMATSRFAH
YLKSMVRDKLGSFMSRSECEYFLNQWISNYVVGSDDAGQDIKAKYPLREARIDVSDIPGKPGFYKAVAYLKPHFQLEGLT
ASLRLVADLPPPAQG

Sequences:

>Translated_495_residues
MSEQNLPESAAVESAAPEDSLLDSIIAETRMARSDLERERARDLLGEWVSEVLSGTVTVSGDVLASIEARIAQIDALLSA
QLSTIMHEPAFQKLEGSWRGLHYLVHQSETGTGLKIRMLNVSRKDLIRDFKSAAEFDQSALFKKVYEEEYGTFGGAPFAA
MIGDYEFSNHPEDLFLLEEISHVAAAAHAPFLSAASAGMFGLDSLTELSIPRDLAKGFDTVEYAKWKSLRQSEDARYIAL
ALPHVLGRLPYGAATVPVEAFNFEEDVNGKEHGKYLWLNAAYALGTRLTQAYAKYGWCAAIRGVEGGGLVEGLPAHTFTT
DDGEVELKCPTEVAITDRREKELADLGFIALTHCKGTDYAAFFSTQSAQKPKEYDSDSANANARIACQLQYIMATSRFAH
YLKSMVRDKLGSFMSRSECEYFLNQWISNYVVGSDDAGQDIKAKYPLREARIDVSDIPGKPGFYKAVAYLKPHFQLEGLT
ASLRLVADLPPPAQG
>Mature_494_residues
SEQNLPESAAVESAAPEDSLLDSIIAETRMARSDLERERARDLLGEWVSEVLSGTVTVSGDVLASIEARIAQIDALLSAQ
LSTIMHEPAFQKLEGSWRGLHYLVHQSETGTGLKIRMLNVSRKDLIRDFKSAAEFDQSALFKKVYEEEYGTFGGAPFAAM
IGDYEFSNHPEDLFLLEEISHVAAAAHAPFLSAASAGMFGLDSLTELSIPRDLAKGFDTVEYAKWKSLRQSEDARYIALA
LPHVLGRLPYGAATVPVEAFNFEEDVNGKEHGKYLWLNAAYALGTRLTQAYAKYGWCAAIRGVEGGGLVEGLPAHTFTTD
DGEVELKCPTEVAITDRREKELADLGFIALTHCKGTDYAAFFSTQSAQKPKEYDSDSANANARIACQLQYIMATSRFAHY
LKSMVRDKLGSFMSRSECEYFLNQWISNYVVGSDDAGQDIKAKYPLREARIDVSDIPGKPGFYKAVAYLKPHFQLEGLTA
SLRLVADLPPPAQG

Specific function: Unknown

COG id: COG3517

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54458; Mature: 54327

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQNLPESAAVESAAPEDSLLDSIIAETRMARSDLERERARDLLGEWVSEVLSGTVTVS
CCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC
GDVLASIEARIAQIDALLSAQLSTIMHEPAFQKLEGSWRGLHYLVHQSETGTGLKIRMLN
CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEC
VSRKDLIRDFKSAAEFDQSALFKKVYEEEYGTFGGAPFAAMIGDYEFSNHPEDLFLLEEI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHH
SHVAAAAHAPFLSAASAGMFGLDSLTELSIPRDLAKGFDTVEYAKWKSLRQSEDARYIAL
HHHHHHHHCCHHHHHCCCCCCCCHHHHHCCCHHHHCCCCHHHHHHHHHHHHCCCCCCHHH
ALPHVLGRLPYGAATVPVEAFNFEEDVNGKEHGKYLWLNAAYALGTRLTQAYAKYGWCAA
HHHHHHHCCCCCCCCCCEEEECCHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
IRGVEGGGLVEGLPAHTFTTDDGEVELKCPTEVAITDRREKELADLGFIALTHCKGTDYA
HCCCCCCCCCCCCCCCEEECCCCEEEEECCCCEEECCCHHHHHHHHCCEEEEECCCCCCE
AFFSTQSAQKPKEYDSDSANANARIACQLQYIMATSRFAHYLKSMVRDKLGSFMSRSECE
EEECCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFLNQWISNYVVGSDDAGQDIKAKYPLREARIDVSDIPGKPGFYKAVAYLKPHFQLEGLT
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHCCCCCCCHHHHHHHHCCCEEECCCE
ASLRLVADLPPPAQG
EEEEEEECCCCCCCC
>Mature Secondary Structure 
SEQNLPESAAVESAAPEDSLLDSIIAETRMARSDLERERARDLLGEWVSEVLSGTVTVS
CCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC
GDVLASIEARIAQIDALLSAQLSTIMHEPAFQKLEGSWRGLHYLVHQSETGTGLKIRMLN
CHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEC
VSRKDLIRDFKSAAEFDQSALFKKVYEEEYGTFGGAPFAAMIGDYEFSNHPEDLFLLEEI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHH
SHVAAAAHAPFLSAASAGMFGLDSLTELSIPRDLAKGFDTVEYAKWKSLRQSEDARYIAL
HHHHHHHHCCHHHHHCCCCCCCCHHHHHCCCHHHHCCCCHHHHHHHHHHHHCCCCCCHHH
ALPHVLGRLPYGAATVPVEAFNFEEDVNGKEHGKYLWLNAAYALGTRLTQAYAKYGWCAA
HHHHHHHCCCCCCCCCCEEEECCHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
IRGVEGGGLVEGLPAHTFTTDDGEVELKCPTEVAITDRREKELADLGFIALTHCKGTDYA
HCCCCCCCCCCCCCCCEEECCCCEEEEECCCCEEECCCHHHHHHHHCCEEEEECCCCCCE
AFFSTQSAQKPKEYDSDSANANARIACQLQYIMATSRFAHYLKSMVRDKLGSFMSRSECE
EEECCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFLNQWISNYVVGSDDAGQDIKAKYPLREARIDVSDIPGKPGFYKAVAYLKPHFQLEGLT
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHCCCCCCCHHHHHHHHCCCEEECCCE
ASLRLVADLPPPAQG
EEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA