Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238920627

Identifier: 238920627

GI number: 238920627

Start: 2633938

End: 2634312

Strand: Direct

Name: 238920627

Synonym: NT01EI_2739

Alternate gene names: NA

Gene position: 2633938-2634312 (Clockwise)

Preceding gene: 238920626

Following gene: 238920628

Centisome position: 69.09

GC content: 52.8

Gene sequence:

>375_bases
ATGGAGAGCGGTACCCAGGGTCTGAATACCGGTAAGGCCACAATGTCGGTATTCCGTATAACCAAATGGATGGACTGCGC
CAGTGTCAAGCTGGCCTCGGCCGCCGTTCAGGGCCAGAACTTTCCCTCGCTGGAAGTGGAGATTTGTACCCAGGCTGGCG
ATAAGTTCGCCTTCTGTATCTATAAATTTACTAATGTAGCCATCTCCAGCTATGACTGCTCCGGGGCCTCTGGCGGAAGC
GACCGCCCGCAGGAAACCATTGATTTCGCCTATAAGGAAGTGACTTGGGAATATATTCCCCAGGATCAGAGCGGTAAGGC
GGGCAGTAAAATTGGGCCCGAGGGCTGGAGTCTTATTACCAACCAGAAGAAGTAA

Upstream 100 bases:

>100_bases
TATCAAACTAGATAAGGTTGATGGGGAATCTACTGATGCTAAGCACAAAAAATGGATTGAAGTACTGGGCTTTGCATGGG
GAGCAGGCAATGAGTGCTCA

Downstream 100 bases:

>100_bases
AACCATCAAGCTGGGGGTCAGGTACAGGTGGCGTCGCAAATATGTCACCCTGTACCGTTCCCCTCTTTACACAGATAGGC
GATACCCCTTCCGCTTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MESGTQGLNTGKATMSVFRITKWMDCASVKLASAAVQGQNFPSLEVEICTQAGDKFAFCIYKFTNVAISSYDCSGASGGS
DRPQETIDFAYKEVTWEYIPQDQSGKAGSKIGPEGWSLITNQKK

Sequences:

>Translated_124_residues
MESGTQGLNTGKATMSVFRITKWMDCASVKLASAAVQGQNFPSLEVEICTQAGDKFAFCIYKFTNVAISSYDCSGASGGS
DRPQETIDFAYKEVTWEYIPQDQSGKAGSKIGPEGWSLITNQKK
>Mature_124_residues
MESGTQGLNTGKATMSVFRITKWMDCASVKLASAAVQGQNFPSLEVEICTQAGDKFAFCIYKFTNVAISSYDCSGASGGS
DRPQETIDFAYKEVTWEYIPQDQSGKAGSKIGPEGWSLITNQKK

Specific function: Unknown

COG id: COG3157

COG function: function code S; Hemolysin-coregulated protein (uncharacterized)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13438; Mature: 13438

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESGTQGLNTGKATMSVFRITKWMDCASVKLASAAVQGQNFPSLEVEICTQAGDKFAFCI
CCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEE
YKFTNVAISSYDCSGASGGSDRPQETIDFAYKEVTWEYIPQDQSGKAGSKIGPEGWSLIT
EEECCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCEEEC
NQKK
CCCC
>Mature Secondary Structure
MESGTQGLNTGKATMSVFRITKWMDCASVKLASAAVQGQNFPSLEVEICTQAGDKFAFCI
CCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEE
YKFTNVAISSYDCSGASGGSDRPQETIDFAYKEVTWEYIPQDQSGKAGSKIGPEGWSLIT
EEECCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCEEEC
NQKK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA