| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920621
Identifier: 238920621
GI number: 238920621
Start: 2627075
End: 2628169
Strand: Direct
Name: 238920621
Synonym: NT01EI_2733
Alternate gene names: NA
Gene position: 2627075-2628169 (Clockwise)
Preceding gene: 238920620
Following gene: 238920625
Centisome position: 68.91
GC content: 49.86
Gene sequence:
>1095_bases ATGGTCGCCCCCTACATCTTGTGCCACAGTGGGACGATAAATCGTCACTACTTGAGCGGAGCGGCCATCATGAGTGTTAA GACTATCGGCATCGATTTGGCAAAAGAGGTTTTTCAGATCCACGGAACTGACGAACACGGCAAGCGCTTGTTCAACAAGC AACTCAAGCGAGCAAAAATGCTTTCCTTTTTTGCCAACATCCCTCCATGTTTGATCGGCATGGAAGCCTGTGCTTCTGCC CACTTTTGGGCCGGCAAACTAATATCGATGGGCCATAACGTCAAGCTGATGGCCCCTCAGTTCGTCAAGCCCTATGTCAA AACCAATAAGCATGATGCTGCAGACGCAGAGGCTATCTGCGAAGCCGTCACTCGACCTAACATGCGGTTCGTGCCAGTCA AGACTCCTGAGCAACAAGCCGTATTGGCACTTCACCGGAGTCGTCAGAGTTTCATCAAACAACGGACCGCTCAGGCGAAT CAAATTCGGGGGCTATTGGCTGAATTTGGCATCGTTGTATCCCGGGGGATCCAGCAGTTACAACTACAGTTACCTGAGAT CCTGGAAGATGCCAATAACTCATTACCATCTCTATTTCGTGTACAACTGAGTCTGTTACAGCACCATATGACATATCTGT TCGATGTCATCGCTACGCTCGACAAGCAGATTGAGCAGTGCTACCGCCAAAATGCGCTATGTCAGCGTATCAGCAAGATC CCAGGCATTGGCCCAGTCACCGCCACCGCACTCATTGCGACTATCGGCAACGCCAGCAATTTCGAAAATAGCCGACAGTT GGCTGCCTGGTTAGGACTGGTTCCACGTCAGCATTCAAGTGGTGGCAAACAAGTCTTGCTCGGGATAAGCAAACGAGGTG ATGTTTATTTACGAACCTTACTTATTCACGGAGCCAGGGCTGTGTTGCAGTCGGTCAAACGTAAACAGGATGCTGTATCG GGATGGGCCAGTCGGCTACTGGCACGCCGAAATAACAACATTGCCTCAGTAGCATTGGCTAATAAGAATGCGCGGATTGT GTGGGCACTATTGTCAAAAGACCAGGAGTACTGTGCAGCAGTGATAAACGTTTAA
Upstream 100 bases:
>100_bases ATATGAAATAACAGAACACCTCCCCGAAAAATATAGATCTAAATTTTTTGAAGTTGTTAATTCCTACGATACTGAAATTT AAACTTGCTTTGTTAATGGA
Downstream 100 bases:
>100_bases TTATCTGAGTCAATAAGACAGAAACAGCACCACCGATTGTTCAGGCAAGCATGACGTGATGGCAGGACAGGTCAGACCGT GATGGGGAAAACCCGGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MVAPYILCHSGTINRHYLSGAAIMSVKTIGIDLAKEVFQIHGTDEHGKRLFNKQLKRAKMLSFFANIPPCLIGMEACASA HFWAGKLISMGHNVKLMAPQFVKPYVKTNKHDAADAEAICEAVTRPNMRFVPVKTPEQQAVLALHRSRQSFIKQRTAQAN QIRGLLAEFGIVVSRGIQQLQLQLPEILEDANNSLPSLFRVQLSLLQHHMTYLFDVIATLDKQIEQCYRQNALCQRISKI PGIGPVTATALIATIGNASNFENSRQLAAWLGLVPRQHSSGGKQVLLGISKRGDVYLRTLLIHGARAVLQSVKRKQDAVS GWASRLLARRNNNIASVALANKNARIVWALLSKDQEYCAAVINV
Sequences:
>Translated_364_residues MVAPYILCHSGTINRHYLSGAAIMSVKTIGIDLAKEVFQIHGTDEHGKRLFNKQLKRAKMLSFFANIPPCLIGMEACASA HFWAGKLISMGHNVKLMAPQFVKPYVKTNKHDAADAEAICEAVTRPNMRFVPVKTPEQQAVLALHRSRQSFIKQRTAQAN QIRGLLAEFGIVVSRGIQQLQLQLPEILEDANNSLPSLFRVQLSLLQHHMTYLFDVIATLDKQIEQCYRQNALCQRISKI PGIGPVTATALIATIGNASNFENSRQLAAWLGLVPRQHSSGGKQVLLGISKRGDVYLRTLLIHGARAVLQSVKRKQDAVS GWASRLLARRNNNIASVALANKNARIVWALLSKDQEYCAAVINV >Mature_364_residues MVAPYILCHSGTINRHYLSGAAIMSVKTIGIDLAKEVFQIHGTDEHGKRLFNKQLKRAKMLSFFANIPPCLIGMEACASA HFWAGKLISMGHNVKLMAPQFVKPYVKTNKHDAADAEAICEAVTRPNMRFVPVKTPEQQAVLALHRSRQSFIKQRTAQAN QIRGLLAEFGIVVSRGIQQLQLQLPEILEDANNSLPSLFRVQLSLLQHHMTYLFDVIATLDKQIEQCYRQNALCQRISKI PGIGPVTATALIATIGNASNFENSRQLAAWLGLVPRQHSSGGKQVLLGISKRGDVYLRTLLIHGARAVLQSVKRKQDAVS GWASRLLARRNNNIASVALANKNARIVWALLSKDQEYCAAVINV
Specific function: Required for the transposition of an insertion element (Potential) [H]
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 20 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003583 - InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 40268; Mature: 40268
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAPYILCHSGTINRHYLSGAAIMSVKTIGIDLAKEVFQIHGTDEHGKRLFNKQLKRAKM CCCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LSFFANIPPCLIGMEACASAHFWAGKLISMGHNVKLMAPQFVKPYVKTNKHDAADAEAIC HHHHHCCCHHHHHHHHHHCHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCCCHHHHH EAVTRPNMRFVPVKTPEQQAVLALHRSRQSFIKQRTAQANQIRGLLAEFGIVVSRGIQQL HHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLQLPEILEDANNSLPSLFRVQLSLLQHHMTYLFDVIATLDKQIEQCYRQNALCQRISKI HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PGIGPVTATALIATIGNASNFENSRQLAAWLGLVPRQHSSGGKQVLLGISKRGDVYLRTL CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHH LIHGARAVLQSVKRKQDAVSGWASRLLARRNNNIASVALANKNARIVWALLSKDQEYCAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEHHCCHHHHHH VINV HHCC >Mature Secondary Structure MVAPYILCHSGTINRHYLSGAAIMSVKTIGIDLAKEVFQIHGTDEHGKRLFNKQLKRAKM CCCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LSFFANIPPCLIGMEACASAHFWAGKLISMGHNVKLMAPQFVKPYVKTNKHDAADAEAIC HHHHHCCCHHHHHHHHHHCHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCCCHHHHH EAVTRPNMRFVPVKTPEQQAVLALHRSRQSFIKQRTAQANQIRGLLAEFGIVVSRGIQQL HHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLQLPEILEDANNSLPSLFRVQLSLLQHHMTYLFDVIATLDKQIEQCYRQNALCQRISKI HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PGIGPVTATALIATIGNASNFENSRQLAAWLGLVPRQHSSGGKQVLLGISKRGDVYLRTL CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHH LIHGARAVLQSVKRKQDAVSGWASRLLARRNNNIASVALANKNARIVWALLSKDQEYCAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEHHCCHHHHHH VINV HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]