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The map label for this gene is arpB [H]

Identifier: 238920620

GI number: 238920620

Start: 2625056

End: 2627056

Strand: Direct

Name: arpB [H]

Synonym: NT01EI_2732

Alternate gene names: 238920620

Gene position: 2625056-2627056 (Clockwise)

Preceding gene: 238920616

Following gene: 238920621

Centisome position: 68.86

GC content: 40.93

Gene sequence:

>2001_bases
ATGATAAAGCTCACCCCCCCACCCAATAGCAGCCATCCGAATATTATCACGGATAAAGAAGATATTACCTCAGATGAAAA
CCCACATGCCCTTAATGCGGAAAAACCTGAACCAGCAGCATCTCCCATATGTTTTATTGATAAACAAAAACCATACTTCC
CTGATAAGAAAAATACATCCTTAAATTTAAACTGCCAGGTAAGAGACAGCTTCTCCAACCTAATAACATGTCGACATCTT
TCCGCCTTCTGGGTCGCGCAGTTTAACCAAGGTGAAGGTAAAGTTAACTATAAACACTTCTCTTCTGCGGAGGCGCTTAA
TAGTAACATATCCGTTATAGAGAGAGAAGCATCATGCACTGCGCCAGGTGTTATTCAACTCATTGAAAATAAAGATTGGG
GGTGTGCTATTTTTGACACATTCAGTGATATGAGACTGAATGGAGATAAGTTCAGAGCTCTAGAATTAAGTACAATCAGT
CACGCTATGGCGTTAGGCCTCAAAATAAAAAACACCATAAATAAAGAAATATGGGTGATTTACCTCTACGACCCTAATCA
TACAGCCTCCCACCGCCGAGCGGAATACAGCGACAATAATCAGGATGACATAAAGAAACTCACTGCAGGTGATTTTCTTA
CAAAACCGTACTTGCGATGTCACGAACTTATCCCTGCCGGGGTGTCTATGCTGGTAGACAGACATATCCCAGTCAATACT
TCAATTATAACCAGATTGCCCAACAACTTACTTCAGCAAAATATAATTTGGCATGCCATGACTATGGGACTCACAGAAGT
TATCCAACAAGTAACTGAGAAAATAAATCTATCTGCACTCACGCTCAAAAAAAGGGAGGAATTAGTAATTGCTCGGAGGA
GAGATGGCACACCTGGATTGCTTATGGCTCTTCAAAATGGGCATACAGACACAGTGCTAGCATACGGAAAACTGCTCAAA
AAAGCAGGCTTACCTCCAGAAAAAACGGCAGATTTACTGCTAGCAAAAGGAGAGGGGGGAGCCTCGGGTTTAGTGCAGTC
GATGCAAAATGGGCATGCAGATACAGTTCTAGCATACGGAAAACTGCTCAAAAAAGCAGGCTTATCTCCAGAAAAAACGG
CAGATTTACTGCTAGCAAAAGGAGCGGGGGGAGTCTCGGGTTTAGCGCAGGCGATGCAAAATGGGCATGCAGATACTATC
CTGGCATACGGAGATGTTATTAACGCAAACGCAATGTGTTTTAATCATGATAAAATAGTCAATTTACTTGCGGCCAACAC
TACTGATGACACAACAAAAAAAATACCTGGGTTGTTTTTCGCTCTGCAGAATGGCCATACAGACGCAGTACTGGCATACG
GAGAACTCCTCAAAGCTGCGAATCTTAGCCCAGATGAAACAGCGACTCTGCTTGCTGCCAAGAGGTATGATAGTAGCCCT
GGCCTACTTTTAGCATCACAGAATGGGTACATCGATGTCATTCAAGCTTATGGAGAACTCCTCAAAGATCTTAACTTAAA
TAAAGCAAAAGCGGCAGAGTTACTTGCAGCCAGAAGGGATGATGGTATCTCTGTTTTATTCATGGCACTTTATCACGGGA
ATGTGGAAATAATTAAATCTTATGGGATGATAATTGATAACCTTAAATTCAACCCATCGGAAACCGAACAATTATTGGAT
ACCGGATGTAGTAATGGTCTAAATGGTTTGTTTTTTGCACTATCCCATGGGTATAAAAATGCTATTAGCACATATGGAGA
ACTTATTTGTTCTGCTAAATTTAGTCCATATAAAGTCGCGAGACTACTGGCCGCAAAGGGAGTCAATGATACTCCAGGAA
TACTTATGGCTTATCAGAATCAACATACAGAGGCCATAAAGTCATATATTATGGTTATTAACGATACAGGCGTCATTCCA
TATGAAATAACAGAACACCTCCCCGAAAAATATAGATCTAAATTTTTTGAAGTTGTTAATTCCTACGATACTGAAATTTA
A

Upstream 100 bases:

>100_bases
ATAAATAAAAAACAAGATATACTTTATAAGCGTACAAAACATAATTACAGCGCACTATAAAAACCATATTTGATAGGATA
ACATAAGGTATTAATATATT

Downstream 100 bases:

>100_bases
ACTTGCTTTGTTAATGGAATGGTCGCCCCCTACATCTTGTGCCACAGTGGGACGATAAATCGTCACTACTTGAGCGGAGC
GGCCATCATGAGTGTTAAGA

Product: OspD3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 666; Mature: 666

Protein sequence:

>666_residues
MIKLTPPPNSSHPNIITDKEDITSDENPHALNAEKPEPAASPICFIDKQKPYFPDKKNTSLNLNCQVRDSFSNLITCRHL
SAFWVAQFNQGEGKVNYKHFSSAEALNSNISVIEREASCTAPGVIQLIENKDWGCAIFDTFSDMRLNGDKFRALELSTIS
HAMALGLKIKNTINKEIWVIYLYDPNHTASHRRAEYSDNNQDDIKKLTAGDFLTKPYLRCHELIPAGVSMLVDRHIPVNT
SIITRLPNNLLQQNIIWHAMTMGLTEVIQQVTEKINLSALTLKKREELVIARRRDGTPGLLMALQNGHTDTVLAYGKLLK
KAGLPPEKTADLLLAKGEGGASGLVQSMQNGHADTVLAYGKLLKKAGLSPEKTADLLLAKGAGGVSGLAQAMQNGHADTI
LAYGDVINANAMCFNHDKIVNLLAANTTDDTTKKIPGLFFALQNGHTDAVLAYGELLKAANLSPDETATLLAAKRYDSSP
GLLLASQNGYIDVIQAYGELLKDLNLNKAKAAELLAARRDDGISVLFMALYHGNVEIIKSYGMIIDNLKFNPSETEQLLD
TGCSNGLNGLFFALSHGYKNAISTYGELICSAKFSPYKVARLLAAKGVNDTPGILMAYQNQHTEAIKSYIMVINDTGVIP
YEITEHLPEKYRSKFFEVVNSYDTEI

Sequences:

>Translated_666_residues
MIKLTPPPNSSHPNIITDKEDITSDENPHALNAEKPEPAASPICFIDKQKPYFPDKKNTSLNLNCQVRDSFSNLITCRHL
SAFWVAQFNQGEGKVNYKHFSSAEALNSNISVIEREASCTAPGVIQLIENKDWGCAIFDTFSDMRLNGDKFRALELSTIS
HAMALGLKIKNTINKEIWVIYLYDPNHTASHRRAEYSDNNQDDIKKLTAGDFLTKPYLRCHELIPAGVSMLVDRHIPVNT
SIITRLPNNLLQQNIIWHAMTMGLTEVIQQVTEKINLSALTLKKREELVIARRRDGTPGLLMALQNGHTDTVLAYGKLLK
KAGLPPEKTADLLLAKGEGGASGLVQSMQNGHADTVLAYGKLLKKAGLSPEKTADLLLAKGAGGVSGLAQAMQNGHADTI
LAYGDVINANAMCFNHDKIVNLLAANTTDDTTKKIPGLFFALQNGHTDAVLAYGELLKAANLSPDETATLLAAKRYDSSP
GLLLASQNGYIDVIQAYGELLKDLNLNKAKAAELLAARRDDGISVLFMALYHGNVEIIKSYGMIIDNLKFNPSETEQLLD
TGCSNGLNGLFFALSHGYKNAISTYGELICSAKFSPYKVARLLAAKGVNDTPGILMAYQNQHTEAIKSYIMVINDTGVIP
YEITEHLPEKYRSKFFEVVNSYDTEI
>Mature_666_residues
MIKLTPPPNSSHPNIITDKEDITSDENPHALNAEKPEPAASPICFIDKQKPYFPDKKNTSLNLNCQVRDSFSNLITCRHL
SAFWVAQFNQGEGKVNYKHFSSAEALNSNISVIEREASCTAPGVIQLIENKDWGCAIFDTFSDMRLNGDKFRALELSTIS
HAMALGLKIKNTINKEIWVIYLYDPNHTASHRRAEYSDNNQDDIKKLTAGDFLTKPYLRCHELIPAGVSMLVDRHIPVNT
SIITRLPNNLLQQNIIWHAMTMGLTEVIQQVTEKINLSALTLKKREELVIARRRDGTPGLLMALQNGHTDTVLAYGKLLK
KAGLPPEKTADLLLAKGEGGASGLVQSMQNGHADTVLAYGKLLKKAGLSPEKTADLLLAKGAGGVSGLAQAMQNGHADTI
LAYGDVINANAMCFNHDKIVNLLAANTTDDTTKKIPGLFFALQNGHTDAVLAYGELLKAANLSPDETATLLAAKRYDSSP
GLLLASQNGYIDVIQAYGELLKDLNLNKAKAAELLAARRDDGISVLFMALYHGNVEIIKSYGMIIDNLKFNPSETEQLLD
TGCSNGLNGLFFALSHGYKNAISTYGELICSAKFSPYKVARLLAAKGVNDTPGILMAYQNQHTEAIKSYIMVINDTGVIP
YEITEHLPEKYRSKFFEVVNSYDTEI

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 ANK repeats [H]

Homologues:

Organism=Escherichia coli, GI1790447, Length=575, Percent_Identity=24.8695652173913, Blast_Score=112, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR012927 [H]

Pfam domain/function: PF07906 Toxin_15 [H]

EC number: NA

Molecular weight: Translated: 73050; Mature: 73050

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLTPPPNSSHPNIITDKEDITSDENPHALNAEKPEPAASPICFIDKQKPYFPDKKNTS
CEEECCCCCCCCCCEEECHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCE
LNLNCQVRDSFSNLITCRHLSAFWVAQFNQGEGKVNYKHFSSAEALNSNISVIEREASCT
EEEEEEECCCHHHHHHHHHHHEEEEEEECCCCCEEEEEECCCHHHHCCCCEEEEECCCCC
APGVIQLIENKDWGCAIFDTFSDMRLNGDKFRALELSTISHAMALGLKIKNTINKEIWVI
CCCHHHEECCCCCCEEEEECCCCCEECCCCEEEEEHHHHHHHHHHCCHHHCCCCCEEEEE
YLYDPNHTASHRRAEYSDNNQDDIKKLTAGDFLTKPYLRCHELIPAGVSMLVDRHIPVNT
EEECCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
SIITRLPNNLLQQNIIWHAMTMGLTEVIQQVTEKINLSALTLKKREELVIARRRDGTPGL
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCE
LMALQNGHTDTVLAYGKLLKKAGLPPEKTADLLLAKGEGGASGLVQSMQNGHADTVLAYG
EEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH
KLLKKAGLSPEKTADLLLAKGAGGVSGLAQAMQNGHADTILAYGDVINANAMCFNHDKIV
HHHHHCCCCCCCCHHEEEECCCCCHHHHHHHHHCCCCCEEEEECCEECCCEEEECHHHHH
NLLAANTTDDTTKKIPGLFFALQNGHTDAVLAYGELLKAANLSPDETATLLAAKRYDSSP
HHEECCCCCCHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC
GLLLASQNGYIDVIQAYGELLKDLNLNKAKAAELLAARRDDGISVLFMALYHGNVEIIKS
CEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEHHHCCCHHEEHH
YGMIIDNLKFNPSETEQLLDTGCSNGLNGLFFALSHGYKNAISTYGELICSAKFSPYKVA
CCHHEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
RLLAAKGVNDTPGILMAYQNQHTEAIKSYIMVINDTGVIPYEITEHLPEKYRSKFFEVVN
HHHHHCCCCCCCCEEEEECCHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
SYDTEI
HCCCCC
>Mature Secondary Structure
MIKLTPPPNSSHPNIITDKEDITSDENPHALNAEKPEPAASPICFIDKQKPYFPDKKNTS
CEEECCCCCCCCCCEEECHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCE
LNLNCQVRDSFSNLITCRHLSAFWVAQFNQGEGKVNYKHFSSAEALNSNISVIEREASCT
EEEEEEECCCHHHHHHHHHHHEEEEEEECCCCCEEEEEECCCHHHHCCCCEEEEECCCCC
APGVIQLIENKDWGCAIFDTFSDMRLNGDKFRALELSTISHAMALGLKIKNTINKEIWVI
CCCHHHEECCCCCCEEEEECCCCCEECCCCEEEEEHHHHHHHHHHCCHHHCCCCCEEEEE
YLYDPNHTASHRRAEYSDNNQDDIKKLTAGDFLTKPYLRCHELIPAGVSMLVDRHIPVNT
EEECCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
SIITRLPNNLLQQNIIWHAMTMGLTEVIQQVTEKINLSALTLKKREELVIARRRDGTPGL
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCE
LMALQNGHTDTVLAYGKLLKKAGLPPEKTADLLLAKGEGGASGLVQSMQNGHADTVLAYG
EEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHHHH
KLLKKAGLSPEKTADLLLAKGAGGVSGLAQAMQNGHADTILAYGDVINANAMCFNHDKIV
HHHHHCCCCCCCCHHEEEECCCCCHHHHHHHHHCCCCCEEEEECCEECCCEEEECHHHHH
NLLAANTTDDTTKKIPGLFFALQNGHTDAVLAYGELLKAANLSPDETATLLAAKRYDSSP
HHEECCCCCCHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC
GLLLASQNGYIDVIQAYGELLKDLNLNKAKAAELLAARRDDGISVLFMALYHGNVEIIKS
CEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEHHHCCCHHEEHH
YGMIIDNLKFNPSETEQLLDTGCSNGLNGLFFALSHGYKNAISTYGELICSAKFSPYKVA
CCHHEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
RLLAAKGVNDTPGILMAYQNQHTEAIKSYIMVINDTGVIPYEITEHLPEKYRSKFFEVVN
HHHHHCCCCCCCCEEEEECCHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
SYDTEI
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]