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The map label for this gene is ydjZ [H]

Identifier: 238920571

GI number: 238920571

Start: 2578614

End: 2579261

Strand: Reverse

Name: ydjZ [H]

Synonym: NT01EI_2683

Alternate gene names: 238920571

Gene position: 2579261-2578614 (Counterclockwise)

Preceding gene: 238920573

Following gene: 238920570

Centisome position: 67.66

GC content: 56.94

Gene sequence:

>648_bases
GTGGGGAGCGCTGCGGCGGTGGCACTACTGGTGCTGTGTTGGCCAGAGGCGCGTCACGAGGCTATGCGGATCGGGCGTCT
GCTCGCCTCTCTGGACCTTGCTGCGCTGTTGGCTTACCTGCGGTCATTCGGTCCCTGGGCGATGCTGGCCTCCTTTTTTC
TGATGATTTTTCAGGCGCTGGTGGCGCCGCTGCCCGCGTTTGTCATCACCTTTGCTAATGCAGCGCTGTTTGGCTGGTGG
CAGGGGGCATTGCTATCCTGGTTCAGTGCTACGGTGGCGGCGGCCCTTTGCTTTTGTCTGGCGCGCATGCTGGGGCGGGA
TACGTTGGCGCGCTGGGTTTCATCCGGTACGCTACAGCGCTGCGACGGCTTCTTTTCCCGTTATGGTCGCTATACCGTGC
TGGTCTGCCGGCTGTTGCCCTTTGTCTCGTTTGACGCGGTGAGCTATGCCGCCGGGTTGACCTCGATGGGACTGATGGAG
TTTTTAGTCGCGACGGCGCTGGGACAATTGCCGGCAACGCTGATCTATTCCTATGTCGGTGCGATGCTGAGCGGTGGTAT
CCAAATGATGCTCAGTGGATTATTGGTATTATTCGTAATAAGCATTATGATTTACGCGATTAAGCATAAATCTGCTCAAA
ATGATTAA

Upstream 100 bases:

>100_bases
ATCGTTGTCGCCCATCAAAGGGGATGTCGGCGCTTATGCGTACTCTTATTCGTTTTATGCAGAGGGCGATGCCGTGTCCA
GTCATGTGAAGTATGGGGTT

Downstream 100 bases:

>100_bases
TTTAAATTAATCTTTGTCGAAGATTAAAACGCGGAGGGAATCATTTATATAAGCCAAGCTTAACTATTAGTTATTGGCGA
AAGTTTTGATTTATGGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MGSAAAVALLVLCWPEARHEAMRIGRLLASLDLAALLAYLRSFGPWAMLASFFLMIFQALVAPLPAFVITFANAALFGWW
QGALLSWFSATVAAALCFCLARMLGRDTLARWVSSGTLQRCDGFFSRYGRYTVLVCRLLPFVSFDAVSYAAGLTSMGLME
FLVATALGQLPATLIYSYVGAMLSGGIQMMLSGLLVLFVISIMIYAIKHKSAQND

Sequences:

>Translated_215_residues
MGSAAAVALLVLCWPEARHEAMRIGRLLASLDLAALLAYLRSFGPWAMLASFFLMIFQALVAPLPAFVITFANAALFGWW
QGALLSWFSATVAAALCFCLARMLGRDTLARWVSSGTLQRCDGFFSRYGRYTVLVCRLLPFVSFDAVSYAAGLTSMGLME
FLVATALGQLPATLIYSYVGAMLSGGIQMMLSGLLVLFVISIMIYAIKHKSAQND
>Mature_214_residues
GSAAAVALLVLCWPEARHEAMRIGRLLASLDLAALLAYLRSFGPWAMLASFFLMIFQALVAPLPAFVITFANAALFGWWQ
GALLSWFSATVAAALCFCLARMLGRDTLARWVSSGTLQRCDGFFSRYGRYTVLVCRLLPFVSFDAVSYAAGLTSMGLMEF
LVATALGQLPATLIYSYVGAMLSGGIQMMLSGLLVLFVISIMIYAIKHKSAQND

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI1788049, Length=181, Percent_Identity=51.3812154696133, Blast_Score=193, Evalue=8e-51,
Organism=Escherichia coli, GI87081964, Length=190, Percent_Identity=29.4736842105263, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23334; Mature: 23203

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSAAAVALLVLCWPEARHEAMRIGRLLASLDLAALLAYLRSFGPWAMLASFFLMIFQAL
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VAPLPAFVITFANAALFGWWQGALLSWFSATVAAALCFCLARMLGRDTLARWVSSGTLQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
CDGFFSRYGRYTVLVCRLLPFVSFDAVSYAAGLTSMGLMEFLVATALGQLPATLIYSYVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLSGGIQMMLSGLLVLFVISIMIYAIKHKSAQND
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GSAAAVALLVLCWPEARHEAMRIGRLLASLDLAALLAYLRSFGPWAMLASFFLMIFQAL
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VAPLPAFVITFANAALFGWWQGALLSWFSATVAAALCFCLARMLGRDTLARWVSSGTLQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
CDGFFSRYGRYTVLVCRLLPFVSFDAVSYAAGLTSMGLMEFLVATALGQLPATLIYSYVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMLSGGIQMMLSGLLVLFVISIMIYAIKHKSAQND
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]