| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is bglX [H]
Identifier: 238920553
GI number: 238920553
Start: 2558195
End: 2560498
Strand: Direct
Name: bglX [H]
Synonym: NT01EI_2665
Alternate gene names: 238920553
Gene position: 2558195-2560498 (Clockwise)
Preceding gene: 238920552
Following gene: 238920554
Centisome position: 67.1
GC content: 63.28
Gene sequence:
>2304_bases ATGAAATGGCTCTGCTCATTCAGCCTGATCAGCACTCTGTTGACGACGCCGACACTGGCCGGGACGCCCCCCTATCCCAG CCAGTGGCCCGATCCCGCCCTGCCCCGCGATGCCTTTGTCACCCAGATGCTGCAGCGAATGACCCTCGCGGAAAAGATCG GCCAGCTGCGGCTGATCAGCGTCGGCCCCGATAACCCCAAAGACAGGGTATATACCATGATCGCCGAGGGGCAGGTCGGG GCGATTTTTAATACCGTCACCCGAACCGGGATCCGCGGCATGCAGGATCAGGCCGTACGGCACAGTCGAATGAAAATTCC GCTGTTTTTCGCCTATGACGTCATCCACGGGCAACGTACGGTATTTCCCATCAGCCTGGGGCTGGCAGCCAGCTGGGATC GCGAGCTGGTTAGCACCGTCGGGCGCGTCTCCGCCTATGAGGCCAGCGAAGACGGGCTGAACATGACCTGGGCACCGATG GTCGACATCACCCGCGACCCGCGCTGGGGACGCACCTCAGAAGGCTTTGGCGAAGATACCTATCTCACCTCGGAAATGGG ACGTCTGATGGTCAAGGCGATGCAGGGGCGTCACCCGGGCGATCGCCATGCGCTGATGACCAGCGTCAAACACTATGCGC TCTACGGCACCGTTGAAGGCGGACGCGACTACAACAGCGTCGATATGAGCCCCCAGCGCATGTTCCAGGACTATCTTCCC CCGTACAAGGCGGCGCTGGACGCCGGCAGCGGCGGTGTGATGGTCTCCCTGAACGCCATTAACGGTACCCCGGCCAGCGC CGACCCCTGGCTGCTAAAAACCCTGCTGCGCGACCAGTGGGGATTTCAGGGCATCACCATCAGCGATCACGGCGCCATTA AGGAACTGATTAACCACGGCGTCGCCCGCGATCCCCAGGATGCGGTACGCCTGGCGATCCAGTCCGGTATCGATATGAGC ATGAGCGACGAGTACTACAGCCAGTACCTGCCGGGACTGGTGAAAAGCGGCCGGGTCAGCGCCGCCGCCGTCGATGACGC CTGTCGCCACGTCCTGAATGTGAAGTACGACATGGGGCTGTTCCACGATCCCTATCGCCATCTCGGCCCCATCGGCAGCG ATCCCCAGGACACCGACGCCGAAAGCCGACTGCACCGCGCCGAGGCGCGCACGGTTGCCGCCCAAACGCTGGTGCTGTTG AAAAACCGCCTGGATACCCTGCCCCTGGCGCGCCGCGGCACCCTCGCCGTTGTCGGTCCGCTGGCCGACAGCCAGCGCGA TGTGATCGGCAGCTGGTCAGCCGCCGGTAAGCCCGCGCAGGCCGTCACCCTTCTCAGCGGGATCCGCCATGCCATGGCCA ACTATGGCCGCGTACTGTACGCACGCGGCGCCAACATCAGCAATGACGCGGACATTCTCCAGTTTCTCAATCAGTACGGC CCGTCCGTCAGCATCGACCCGCGTCCCGCCCAGGCGATGATCGATGAAGCGGTCGCCGTGGCCAGACAGGCCGATGTGGT GGTAGCGGTCGTCGGTGAGGCGCAGGGAATGGCCCACGAGGCCTCCAGCCGCACCCACATCGATCTGCCGCAGAGCCAGC GGGATCTGATTGCCGCCCTCAAGCAGACCGGCAAGCCGCTGGTACTGGTCTTGATGAATGGTCGCCCGCTGACCCTGGTT CGCGAAGATCAGCAGGCCGACGCCATCCTGGAGAGCTGGTTCCCCGGCACCGAGGGCGGCAACGCGGTCGCGGATGTTCT GTTCGGCGACGTAAACCCCTCCGGCAAGTTGCCCATCTCTTTCCCGCGCTCCGTCGGCCAGATCCCCACCTACTACAGCC GACTGAATACCGGCCGCCCCTACGATCCGCAAAAGCCGGAGAAGTACACATCGCACTATTTTGATGAGGCCAACGGCCCG CTCTACCCCTTCGGCTATGGTCTGAGCTATACCCGCTTCACGCTGTCGGAGATTACCCTGTCGGCGCCGCAGATGGCACG CAATGGTAAGATTGAGGCCAGCATCACCGTCACCAATGCGGGTCCGCGCGCCGGTGCCACGGTCCTGCAGCTCTACCTGC AGGATCCGGTGGCCAGCATCAGCCGTCCGCTGAAGAGCCTACAGGACTTCCACAAGGTGATGCTGCAGCCGGGCGAACGC CGCCGCGTCAGCTTTACCCTGACACCGCAGCAGCTACGCTTCTGGAACGCCCAGATGCAACAGGTCAGCGAACCGGGGCG CATCAACGTATTTATCGGCACCGACGTCCAGCGGGTCAAAAGCGCCCACTTCGACCTGTTATAA
Upstream 100 bases:
>100_bases ATGATCCGCGTATCACGTCAAGCAGCGCCCCTCAGGGAGAGGCCGATACCGATCCGATGACGCTGCCGCGTGCAGCCCAG GCAAAGGGAATTTACACATC
Downstream 100 bases:
>100_bases CCCGACGTTTTCATTACGCACCCGCTGGCGCATAATCAATCTCATCGCCCCGGCTTTGCCGGGGCCGCAGCATCCTGAGG GGGAGCGCGATGTATACCTG
Product: periplasmic beta-glucosidase
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 767; Mature: 767
Protein sequence:
>767_residues MKWLCSFSLISTLLTTPTLAGTPPYPSQWPDPALPRDAFVTQMLQRMTLAEKIGQLRLISVGPDNPKDRVYTMIAEGQVG AIFNTVTRTGIRGMQDQAVRHSRMKIPLFFAYDVIHGQRTVFPISLGLAASWDRELVSTVGRVSAYEASEDGLNMTWAPM VDITRDPRWGRTSEGFGEDTYLTSEMGRLMVKAMQGRHPGDRHALMTSVKHYALYGTVEGGRDYNSVDMSPQRMFQDYLP PYKAALDAGSGGVMVSLNAINGTPASADPWLLKTLLRDQWGFQGITISDHGAIKELINHGVARDPQDAVRLAIQSGIDMS MSDEYYSQYLPGLVKSGRVSAAAVDDACRHVLNVKYDMGLFHDPYRHLGPIGSDPQDTDAESRLHRAEARTVAAQTLVLL KNRLDTLPLARRGTLAVVGPLADSQRDVIGSWSAAGKPAQAVTLLSGIRHAMANYGRVLYARGANISNDADILQFLNQYG PSVSIDPRPAQAMIDEAVAVARQADVVVAVVGEAQGMAHEASSRTHIDLPQSQRDLIAALKQTGKPLVLVLMNGRPLTLV REDQQADAILESWFPGTEGGNAVADVLFGDVNPSGKLPISFPRSVGQIPTYYSRLNTGRPYDPQKPEKYTSHYFDEANGP LYPFGYGLSYTRFTLSEITLSAPQMARNGKIEASITVTNAGPRAGATVLQLYLQDPVASISRPLKSLQDFHKVMLQPGER RRVSFTLTPQQLRFWNAQMQQVSEPGRINVFIGTDVQRVKSAHFDLL
Sequences:
>Translated_767_residues MKWLCSFSLISTLLTTPTLAGTPPYPSQWPDPALPRDAFVTQMLQRMTLAEKIGQLRLISVGPDNPKDRVYTMIAEGQVG AIFNTVTRTGIRGMQDQAVRHSRMKIPLFFAYDVIHGQRTVFPISLGLAASWDRELVSTVGRVSAYEASEDGLNMTWAPM VDITRDPRWGRTSEGFGEDTYLTSEMGRLMVKAMQGRHPGDRHALMTSVKHYALYGTVEGGRDYNSVDMSPQRMFQDYLP PYKAALDAGSGGVMVSLNAINGTPASADPWLLKTLLRDQWGFQGITISDHGAIKELINHGVARDPQDAVRLAIQSGIDMS MSDEYYSQYLPGLVKSGRVSAAAVDDACRHVLNVKYDMGLFHDPYRHLGPIGSDPQDTDAESRLHRAEARTVAAQTLVLL KNRLDTLPLARRGTLAVVGPLADSQRDVIGSWSAAGKPAQAVTLLSGIRHAMANYGRVLYARGANISNDADILQFLNQYG PSVSIDPRPAQAMIDEAVAVARQADVVVAVVGEAQGMAHEASSRTHIDLPQSQRDLIAALKQTGKPLVLVLMNGRPLTLV REDQQADAILESWFPGTEGGNAVADVLFGDVNPSGKLPISFPRSVGQIPTYYSRLNTGRPYDPQKPEKYTSHYFDEANGP LYPFGYGLSYTRFTLSEITLSAPQMARNGKIEASITVTNAGPRAGATVLQLYLQDPVASISRPLKSLQDFHKVMLQPGER RRVSFTLTPQQLRFWNAQMQQVSEPGRINVFIGTDVQRVKSAHFDLL >Mature_767_residues MKWLCSFSLISTLLTTPTLAGTPPYPSQWPDPALPRDAFVTQMLQRMTLAEKIGQLRLISVGPDNPKDRVYTMIAEGQVG AIFNTVTRTGIRGMQDQAVRHSRMKIPLFFAYDVIHGQRTVFPISLGLAASWDRELVSTVGRVSAYEASEDGLNMTWAPM VDITRDPRWGRTSEGFGEDTYLTSEMGRLMVKAMQGRHPGDRHALMTSVKHYALYGTVEGGRDYNSVDMSPQRMFQDYLP PYKAALDAGSGGVMVSLNAINGTPASADPWLLKTLLRDQWGFQGITISDHGAIKELINHGVARDPQDAVRLAIQSGIDMS MSDEYYSQYLPGLVKSGRVSAAAVDDACRHVLNVKYDMGLFHDPYRHLGPIGSDPQDTDAESRLHRAEARTVAAQTLVLL KNRLDTLPLARRGTLAVVGPLADSQRDVIGSWSAAGKPAQAVTLLSGIRHAMANYGRVLYARGANISNDADILQFLNQYG PSVSIDPRPAQAMIDEAVAVARQADVVVAVVGEAQGMAHEASSRTHIDLPQSQRDLIAALKQTGKPLVLVLMNGRPLTLV REDQQADAILESWFPGTEGGNAVADVLFGDVNPSGKLPISFPRSVGQIPTYYSRLNTGRPYDPQKPEKYTSHYFDEANGP LYPFGYGLSYTRFTLSEITLSAPQMARNGKIEASITVTNAGPRAGATVLQLYLQDPVASISRPLKSLQDFHKVMLQPGER RRVSFTLTPQQLRFWNAQMQQVSEPGRINVFIGTDVQRVKSAHFDLL
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=771, Percent_Identity=70.1686121919585, Blast_Score=1154, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 84205; Mature: 84205
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWLCSFSLISTLLTTPTLAGTPPYPSQWPDPALPRDAFVTQMLQRMTLAEKIGQLRLIS CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEE VGPDNPKDRVYTMIAEGQVGAIFNTVTRTGIRGMQDQAVRHSRMKIPLFFAYDVIHGQRT ECCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEHHCCCCE VFPISLGLAASWDRELVSTVGRVSAYEASEDGLNMTWAPMVDITRDPRWGRTSEGFGEDT EEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCEECCCCCCCCCCCCCCCCCC YLTSEMGRLMVKAMQGRHPGDRHALMTSVKHYALYGTVEGGRDYNSVDMSPQRMFQDYLP HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHCC PYKAALDAGSGGVMVSLNAINGTPASADPWLLKTLLRDQWGFQGITISDHGAIKELINHG HHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCC VARDPQDAVRLAIQSGIDMSMSDEYYSQYLPGLVKSGRVSAAAVDDACRHVLNVKYDMGL CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC FHDPYRHLGPIGSDPQDTDAESRLHRAEARTVAAQTLVLLKNRLDTLPLARRGTLAVVGP CCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC LADSQRDVIGSWSAAGKPAQAVTLLSGIRHAMANYGRVLYARGANISNDADILQFLNQYG CCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHC PSVSIDPRPAQAMIDEAVAVARQADVVVAVVGEAQGMAHEASSRTHIDLPQSQRDLIAAL CCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHCCCCCEECCCCHHHHHHHHH KQTGKPLVLVLMNGRPLTLVREDQQADAILESWFPGTEGGNAVADVLFGDVNPSGKLPIS HHCCCCEEEEEECCCEEEEEECCHHHHHHHHHCCCCCCCCCCEEHHEEECCCCCCCCCCC FPRSVGQIPTYYSRLNTGRPYDPQKPEKYTSHYFDEANGPLYPFGYGLSYTRFTLSEITL CCHHCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHEEHHHHHC SAPQMARNGKIEASITVTNAGPRAGATVLQLYLQDPVASISRPLKSLQDFHKVMLQPGER CCCHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCC RRVSFTLTPQQLRFWNAQMQQVSEPGRINVFIGTDVQRVKSAHFDLL CEEEEEECHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCC >Mature Secondary Structure MKWLCSFSLISTLLTTPTLAGTPPYPSQWPDPALPRDAFVTQMLQRMTLAEKIGQLRLIS CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEE VGPDNPKDRVYTMIAEGQVGAIFNTVTRTGIRGMQDQAVRHSRMKIPLFFAYDVIHGQRT ECCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEHHCCCCE VFPISLGLAASWDRELVSTVGRVSAYEASEDGLNMTWAPMVDITRDPRWGRTSEGFGEDT EEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCEECCCCCCCCCCCCCCCCCC YLTSEMGRLMVKAMQGRHPGDRHALMTSVKHYALYGTVEGGRDYNSVDMSPQRMFQDYLP HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHCC PYKAALDAGSGGVMVSLNAINGTPASADPWLLKTLLRDQWGFQGITISDHGAIKELINHG HHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCC VARDPQDAVRLAIQSGIDMSMSDEYYSQYLPGLVKSGRVSAAAVDDACRHVLNVKYDMGL CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC FHDPYRHLGPIGSDPQDTDAESRLHRAEARTVAAQTLVLLKNRLDTLPLARRGTLAVVGP CCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC LADSQRDVIGSWSAAGKPAQAVTLLSGIRHAMANYGRVLYARGANISNDADILQFLNQYG CCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHC PSVSIDPRPAQAMIDEAVAVARQADVVVAVVGEAQGMAHEASSRTHIDLPQSQRDLIAAL CCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHCCCCCEECCCCHHHHHHHHH KQTGKPLVLVLMNGRPLTLVREDQQADAILESWFPGTEGGNAVADVLFGDVNPSGKLPIS HHCCCCEEEEEECCCEEEEEECCHHHHHHHHHCCCCCCCCCCEEHHEEECCCCCCCCCCC FPRSVGQIPTYYSRLNTGRPYDPQKPEKYTSHYFDEANGPLYPFGYGLSYTRFTLSEITL CCHHCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHEEHHHHHC SAPQMARNGKIEASITVTNAGPRAGATVLQLYLQDPVASISRPLKSLQDFHKVMLQPGER CCCHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCC RRVSFTLTPQQLRFWNAQMQQVSEPGRINVFIGTDVQRVKSAHFDLL CEEEEEECHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]