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The map label for this gene is ycdZ [H]

Identifier: 238920540

GI number: 238920540

Start: 2547398

End: 2547901

Strand: Reverse

Name: ycdZ [H]

Synonym: NT01EI_2652

Alternate gene names: 238920540

Gene position: 2547901-2547398 (Counterclockwise)

Preceding gene: 238920543

Following gene: 238920539

Centisome position: 66.83

GC content: 61.9

Gene sequence:

>504_bases
ATGTCCGTCCTACTTGCCATTGCCTTAACCACTGGGATCCTGTCGGCCGTGTGGGGATGGGTCGCCATCAGCCTCGGACT
GTCCGCCTGGGCCGGTTTCCTGGGTTGTACCGCGTACTTTGCCTGTCCGCAGGGGGGGCTGAAAGGGCTGGGTATCTCAC
TGTGTACCCTGTGCAGCGGCGTGTTCTGGGCGGAGATCATCATCAACGGCAGCGCGCTGCAGCCGCATATGGCGCTGCTG
GGGTATGGACTGACGGGAGCGGTGGCTTTTCTGATGTGCGTTCAGGCCAGCCAGCGTTGGCTCTCCTTTGTTCCGGGGAC
CTTTATCGGCTGCTGCGCCACTTTTGCCGCCGACGGTGACTGGCGTCTGGTGATACCGTCACTGTTGCTGGGGCTGCTGT
TTGGCTATGGGATGAAAAATAGCGGCCTGTGGCTGGCGGCACGTCGGCGCCGCAGCGTACCGTTGCAGGAGGAAACTCGC
GTTGATGGTGCAGAGGTTCGCTAG

Upstream 100 bases:

>100_bases
ATGTAATTATCACGAAATGATTAAGTATCGGTGTGATTCCTATCAATGAATATTACCCGCTCGTCGCTACACTACGCTTT
TTGTATCAGGAGAGTCTGCG

Downstream 100 bases:

>100_bases
ATCGGGGACATCACGCTGGTGGCTTTTTCAACGATTGTCCGCCAGTGGGAGCGATATCACCCTCATCCGCTTTTTTTCTC
TTTAATCCCCCGTATAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MSVLLAIALTTGILSAVWGWVAISLGLSAWAGFLGCTAYFACPQGGLKGLGISLCTLCSGVFWAEIIINGSALQPHMALL
GYGLTGAVAFLMCVQASQRWLSFVPGTFIGCCATFAADGDWRLVIPSLLLGLLFGYGMKNSGLWLAARRRRSVPLQEETR
VDGAEVR

Sequences:

>Translated_167_residues
MSVLLAIALTTGILSAVWGWVAISLGLSAWAGFLGCTAYFACPQGGLKGLGISLCTLCSGVFWAEIIINGSALQPHMALL
GYGLTGAVAFLMCVQASQRWLSFVPGTFIGCCATFAADGDWRLVIPSLLLGLLFGYGMKNSGLWLAARRRRSVPLQEETR
VDGAEVR
>Mature_166_residues
SVLLAIALTTGILSAVWGWVAISLGLSAWAGFLGCTAYFACPQGGLKGLGISLCTLCSGVFWAEIIINGSALQPHMALLG
YGLTGAVAFLMCVQASQRWLSFVPGTFIGCCATFAADGDWRLVIPSLLLGLLFGYGMKNSGLWLAARRRRSVPLQEETRV
DGAEVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yahC [H]

Homologues:

Organism=Escherichia coli, GI87081825, Length=160, Percent_Identity=70.625, Blast_Score=233, Evalue=5e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009476 [H]

Pfam domain/function: PF06496 DUF1097 [H]

EC number: NA

Molecular weight: Translated: 17676; Mature: 17545

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLLAIALTTGILSAVWGWVAISLGLSAWAGFLGCTAYFACPQGGLKGLGISLCTLCSG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
VFWAEIIINGSALQPHMALLGYGLTGAVAFLMCVQASQRWLSFVPGTFIGCCATFAADGD
HHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
WRLVIPSLLLGLLFGYGMKNSGLWLAARRRRSVPLQEETRVDGAEVR
CEEHHHHHHHHHHHHCCCCCCCEEEEEHHHCCCCCCHHHCCCCCCCC
>Mature Secondary Structure 
SVLLAIALTTGILSAVWGWVAISLGLSAWAGFLGCTAYFACPQGGLKGLGISLCTLCSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
VFWAEIIINGSALQPHMALLGYGLTGAVAFLMCVQASQRWLSFVPGTFIGCCATFAADGD
HHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
WRLVIPSLLLGLLFGYGMKNSGLWLAARRRRSVPLQEETRVDGAEVR
CEEHHHHHHHHHHHHCCCCCCCEEEEEHHHCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]