| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yfaZ [H]
Identifier: 238920533
GI number: 238920533
Start: 2539124
End: 2539699
Strand: Reverse
Name: yfaZ [H]
Synonym: NT01EI_2645
Alternate gene names: 238920533
Gene position: 2539699-2539124 (Counterclockwise)
Preceding gene: 238920534
Following gene: 238920530
Centisome position: 66.62
GC content: 57.29
Gene sequence:
>576_bases ATGTTTGATAAGGAAAATTCAATGAAGAAGTCGTTTTACTGCCTGGTAGCCGGCAGCGCGCTACTGTTGAGTGGGGCAGC ACAGGCGATCAGTCTGAACGGACAGGCCGGTAAGGATTTTACCAATCTGGAGGTCGGTCTGGGGACCGGGTCGTCAGGCC TGTACTCGACCCTGAACTGGGCACACAGTGATAATGACGGTGATATCGTTGGCCTGGGACTGGGGTTGGGCGTACCTTTG GGTTCCGCCATCATCTCCGTGGGCGGTAAGGCCATGTATCTGAATCCGAAGCACAGTGGCGGCGGCAGCGATGACTATGC CGTGGCGATCGGCGGCGGCGTTAACCTGCCGCTGGGTCAAAGCTTCGCCCTGTACGGCTCTGCCTACTATGCGCCGGACT CCCTGTCCAGCGGAATTAAAGACTATACGGAGGCTACCGGTGGGGTGCGCTGGAACGTGATGCGTCCACTGAGTGTGGAC GTCGGTTACCGCTATATTAATCTGGCCGGTAAAAACGGTCACCGCGATAATGCAGTCGCCGATGGTCCCTACGTTGGGGT CGGTCTCAGTTTCTGA
Upstream 100 bases:
>100_bases GCGGTGAGCCGATGACCCCGCAGGGCGGGTGGATGCCGGAGGCGCATTTTTCACCGGTGGGGCGGCTGGGTGTTGGGAAA ATGTTGGAGCACATTTTTTA
Downstream 100 bases:
>100_bases CGACCGGTACGGCGGCGTTTACGCGCCGCCTGTTTCTCCCGCGCTCCTTTATTTCGTCCCTTCCCTGTTTTCCCATCCTG GCTCAGTACATCAGCGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MFDKENSMKKSFYCLVAGSALLLSGAAQAISLNGQAGKDFTNLEVGLGTGSSGLYSTLNWAHSDNDGDIVGLGLGLGVPL GSAIISVGGKAMYLNPKHSGGGSDDYAVAIGGGVNLPLGQSFALYGSAYYAPDSLSSGIKDYTEATGGVRWNVMRPLSVD VGYRYINLAGKNGHRDNAVADGPYVGVGLSF
Sequences:
>Translated_191_residues MFDKENSMKKSFYCLVAGSALLLSGAAQAISLNGQAGKDFTNLEVGLGTGSSGLYSTLNWAHSDNDGDIVGLGLGLGVPL GSAIISVGGKAMYLNPKHSGGGSDDYAVAIGGGVNLPLGQSFALYGSAYYAPDSLSSGIKDYTEATGGVRWNVMRPLSVD VGYRYINLAGKNGHRDNAVADGPYVGVGLSF >Mature_191_residues MFDKENSMKKSFYCLVAGSALLLSGAAQAISLNGQAGKDFTNLEVGLGTGSSGLYSTLNWAHSDNDGDIVGLGLGLGVPL GSAIISVGGKAMYLNPKHSGGGSDDYAVAIGGGVNLPLGQSFALYGSAYYAPDSLSSGIKDYTEATGGVRWNVMRPLSVD VGYRYINLAGKNGHRDNAVADGPYVGVGLSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082072, Length=184, Percent_Identity=54.3478260869565, Blast_Score=181, Evalue=3e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001702 - InterPro: IPR009998 [H]
Pfam domain/function: PF07437 YfaZ [H]
EC number: NA
Molecular weight: Translated: 19567; Mature: 19567
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDKENSMKKSFYCLVAGSALLLSGAAQAISLNGQAGKDFTNLEVGLGTGSSGLYSTLNW CCCCCCCCCCEEEEEEECCHHEECCCCEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEE AHSDNDGDIVGLGLGLGVPLGSAIISVGGKAMYLNPKHSGGGSDDYAVAIGGGVNLPLGQ CCCCCCCCEEEEECCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCC SFALYGSAYYAPDSLSSGIKDYTEATGGVRWNVMRPLSVDVGYRYINLAGKNGHRDNAVA CEEEECEEEECCCHHHHHHHHHHHHCCCEEEEEECCEEEECCEEEEEEECCCCCCCCCCC DGPYVGVGLSF CCCEEEEEECC >Mature Secondary Structure MFDKENSMKKSFYCLVAGSALLLSGAAQAISLNGQAGKDFTNLEVGLGTGSSGLYSTLNW CCCCCCCCCCEEEEEEECCHHEECCCCEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEE AHSDNDGDIVGLGLGLGVPLGSAIISVGGKAMYLNPKHSGGGSDDYAVAIGGGVNLPLGQ CCCCCCCCEEEEECCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCC SFALYGSAYYAPDSLSSGIKDYTEATGGVRWNVMRPLSVDVGYRYINLAGKNGHRDNAVA CEEEECEEEECCCHHHHHHHHHHHHCCCEEEEEECCEEEECCEEEEEEECCCCCCCCCCC DGPYVGVGLSF CCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]