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The map label for this gene is rcsD [H]

Identifier: 238920515

GI number: 238920515

Start: 2515147

End: 2517828

Strand: Direct

Name: rcsD [H]

Synonym: NT01EI_2627

Alternate gene names: 238920515

Gene position: 2515147-2517828 (Clockwise)

Preceding gene: 238920514

Following gene: 238920516

Centisome position: 65.97

GC content: 59.4

Gene sequence:

>2682_bases
ATGTCCCTTTCCGGCATTACCCGCAGCTACCTGCTGTTCCTGTTGCTGCTGTTGCTGGGCAACCTGCTGTATGGCTATAA
CTATGTGAACGCCTATATCGGCGCCAAACAAAATATGCTGGCCTCGGTGGCCAGACAGATACAGCAGCGGGTGGAGACCT
ACCGCTTCATTACCTACCAGATTTATGAAAACATTCCGGCAGAAAGCACCACCGACGCAGTGCAGACGCCGCGTGAACTG
CGTCTGCGCCCGGACATCTATCTGCTGGACAAGGTCCGCCATAAGACCGATGCGCTGATCTTCGGCCAGCACGATAACGC
CACCTCCGCTCTGGCGCAAAGCCTGTCGCGCTATCTTGACGTCCTGTGGAGCGCCAGCACCGACGCCTACTCGCTCTACT
ACCTCAACGGCCAGGACAACAGTCTGATCCTGATTTCGACCATGCCGATGAAGGATCTCTCGGCGCGCTATAAAGATGGT
TACCTGGGTAATCTGGTGGAGACCCGCAAGGCCGAAATGCTGCAGCAGTCCAACGCCCTCGACCTGCGCGAAGGCTTCTC
CGGACTGCGCAAGTTCCGTTTTCTCAACGCCTACTACTTTACCCTGCGCACCACCTTCAATAATCCGGGCCATCTGGCCA
CCGTCATCGCCTTCGACCTGCCGGTGGGCGATATGCTGCCGGACAATCTGCCGGCGACGCGCTTCCAACTGCAGGAGGAT
CAGGACAGCACCAGCGAATGGGGCGGCCACGACGAGCTGCCGCGCGCCTTTACCCAGCTGGGCTGGCCGTGGGTCACCGT
CAATGCGCCCATCTACAACACGCCGCTGAAAATCCAATTTCATATCCCGACCATGACTCTCACGCTGGATCTGGCGCGCA
ATAACTTCTGGGTGCTGCTGATCAATCTGGCGCTGCTGATCCTCTCCGCTATCGGCTTCTACATCATCCGCCATCAGTAT
GTCCGCCCGGGCAAACGCATGGCGGCCCAGCTGAATGCCCAGCAGGAGATGAACCAGGAGATCATCACCCACCTGCCAAT
GGGGCTGCTGATTTACCGCTTTGACAGCGACACCCTGGTCGCCAGCAACAAGCTGGCCGACCATCTGTTGCCCCACCTAA
GCCTGAACAAAATCGCCGCCATGGCCGATCGCCACCAGGGGAAGGTGCAGGTCAGCGTCAATAACGCCATGTACGAAGTG
CAGATGGTGCGCAGCCAGCAGACACCCTACTCTGCGCTGTTCCTGATCCGCAATCTGGATAGCGAAATGCTGATGAGCCA
AAAGCTCAAGCTGACACAGGCGGAGTATGAGAAGAACCTGACAGCGCGCAAGACCATGACGGACAACCTGGGCCGGGAGC
TGCGCGATCCGCTGGCGCGGATAATGCAGATCTGCGAGAGCCTGCGCCGCGACCGCGACGCCGGCGGTCAGTCGCCGTTG
GACGATCTGTGGCTGGAGAGCCAGCACGCCCAGCGCCTGATCGATGAGATCACCCTGCTGACCGCCGTCGAAAGCCAGGA
CTGGGCGCCGCCGCAGGGAACCTTCCGCCTGCATGAGCGCATCGATGCCCTGCTGCTGCGCAGCCTGCCGGCCATGCGGC
GCAAGGGGCTGATGCTGCTGGGACGGGTTGAAACCGATCCCGCCCAGCAGTTCAACGGCGATATCGCCACCCTTGAACGG
GTGCTGGAGATGCTGTTGCACTACGCCATCATCACCACCGCCTATGGCAAGATCGGCCTCACCATCGCTCCCGATGCTCA
GCGCCCCGGCCTGCTGCAGATCACCCTCAGCGACACCGGCGCAGGCGTCTCCAGCGCCGAGCGCCACAACCTGCGCTATC
CGGCGCTGGCGCCAGCCCAGCGCGATCGCTTCGCGCGTGGCTCCAGCCTGACCTACTATCTGTGCGCCCAGCTGTGTCGG
CGCCTGGGAGGCGAGCTGACCATCGACAGCAGGCATGATATTGGTACCCACTACCGTTTTAGCTGCCAGATGCAGGCGCT
GCCCCTGGCCGATCAGGACGATGAAAAACTGCTGGACGGCATCACCATCCGTCTGCGGATTACCTCAGAGGAGATCCGCT
CCCGGGTTGCCCAGCGCCTGGAGGGGTTTGGCGCCACCCTGCTGACCGCCGACGCAGAGAACGACGGCGCAGAAAACCAC
AGCGATCTGACGCTGACCGACGATCCGGCACAGGCCCAGACCGATACCCTGCTGCTGGCGGCGGATATCGACGGCTTTGA
GGAGTACGCACCGCAGCGGATCCGGGCCAATTTTAACCTGACCGATGCGCTGATCGATGCCATCCTGCTGCTGATCGAAC
GGCAAATGGCGGTGACAGAACCGCCAGCGCAGTGCGAATATGCTGAAAATACGCCTCTCAAGATTGATAACAATCCTTTT
AAATCAAAGGATTATTATTCTCTATTTTTGGACACAGTACCCGCAGATGTACAGAAACTGTATACTGAGTCGGATCAACA
GGATTGGCCATCGCTGGCCCTCACCGCACATCGTCTCAAGGGGGTCTTTGCCATGCTGGCGTTTCCCGCCGGTAAAGGGC
TGTGCGAACAGTTGGAAGAGGCCATTAAACGCAACGATGCGGAACACGTTAACGTCCTGATCAGTCACATTGACGCTTTT
GTCAGCCAACTGCTGCAACTAGGTAACCAACAATATGAATAA

Upstream 100 bases:

>100_bases
CGGGGCAGATGTCAGCATCCGCCCCCCTTGCTATACTGCGCACAGCGTTTTTCTTGACTGACAGGATCGCCCGCACGCTA
TGGAGCCGACTTCACACACT

Downstream 100 bases:

>100_bases
CCTGAATGTAATCATTGCTGATGACCATCCCATTGTCCTGTTCGGCATCCGAAAGTCGCTAGAACAGATCGAGTGGGTTA
ACGTGGTCGGAGAGTTTGAG

Product: phosphotransfer intermediate protein in two-component regulatory system with RcsBC

Products: NA

Alternate protein names: Phosphotransfer intermediate RcsD [H]

Number of amino acids: Translated: 893; Mature: 892

Protein sequence:

>893_residues
MSLSGITRSYLLFLLLLLLGNLLYGYNYVNAYIGAKQNMLASVARQIQQRVETYRFITYQIYENIPAESTTDAVQTPREL
RLRPDIYLLDKVRHKTDALIFGQHDNATSALAQSLSRYLDVLWSASTDAYSLYYLNGQDNSLILISTMPMKDLSARYKDG
YLGNLVETRKAEMLQQSNALDLREGFSGLRKFRFLNAYYFTLRTTFNNPGHLATVIAFDLPVGDMLPDNLPATRFQLQED
QDSTSEWGGHDELPRAFTQLGWPWVTVNAPIYNTPLKIQFHIPTMTLTLDLARNNFWVLLINLALLILSAIGFYIIRHQY
VRPGKRMAAQLNAQQEMNQEIITHLPMGLLIYRFDSDTLVASNKLADHLLPHLSLNKIAAMADRHQGKVQVSVNNAMYEV
QMVRSQQTPYSALFLIRNLDSEMLMSQKLKLTQAEYEKNLTARKTMTDNLGRELRDPLARIMQICESLRRDRDAGGQSPL
DDLWLESQHAQRLIDEITLLTAVESQDWAPPQGTFRLHERIDALLLRSLPAMRRKGLMLLGRVETDPAQQFNGDIATLER
VLEMLLHYAIITTAYGKIGLTIAPDAQRPGLLQITLSDTGAGVSSAERHNLRYPALAPAQRDRFARGSSLTYYLCAQLCR
RLGGELTIDSRHDIGTHYRFSCQMQALPLADQDDEKLLDGITIRLRITSEEIRSRVAQRLEGFGATLLTADAENDGAENH
SDLTLTDDPAQAQTDTLLLAADIDGFEEYAPQRIRANFNLTDALIDAILLLIERQMAVTEPPAQCEYAENTPLKIDNNPF
KSKDYYSLFLDTVPADVQKLYTESDQQDWPSLALTAHRLKGVFAMLAFPAGKGLCEQLEEAIKRNDAEHVNVLISHIDAF
VSQLLQLGNQQYE

Sequences:

>Translated_893_residues
MSLSGITRSYLLFLLLLLLGNLLYGYNYVNAYIGAKQNMLASVARQIQQRVETYRFITYQIYENIPAESTTDAVQTPREL
RLRPDIYLLDKVRHKTDALIFGQHDNATSALAQSLSRYLDVLWSASTDAYSLYYLNGQDNSLILISTMPMKDLSARYKDG
YLGNLVETRKAEMLQQSNALDLREGFSGLRKFRFLNAYYFTLRTTFNNPGHLATVIAFDLPVGDMLPDNLPATRFQLQED
QDSTSEWGGHDELPRAFTQLGWPWVTVNAPIYNTPLKIQFHIPTMTLTLDLARNNFWVLLINLALLILSAIGFYIIRHQY
VRPGKRMAAQLNAQQEMNQEIITHLPMGLLIYRFDSDTLVASNKLADHLLPHLSLNKIAAMADRHQGKVQVSVNNAMYEV
QMVRSQQTPYSALFLIRNLDSEMLMSQKLKLTQAEYEKNLTARKTMTDNLGRELRDPLARIMQICESLRRDRDAGGQSPL
DDLWLESQHAQRLIDEITLLTAVESQDWAPPQGTFRLHERIDALLLRSLPAMRRKGLMLLGRVETDPAQQFNGDIATLER
VLEMLLHYAIITTAYGKIGLTIAPDAQRPGLLQITLSDTGAGVSSAERHNLRYPALAPAQRDRFARGSSLTYYLCAQLCR
RLGGELTIDSRHDIGTHYRFSCQMQALPLADQDDEKLLDGITIRLRITSEEIRSRVAQRLEGFGATLLTADAENDGAENH
SDLTLTDDPAQAQTDTLLLAADIDGFEEYAPQRIRANFNLTDALIDAILLLIERQMAVTEPPAQCEYAENTPLKIDNNPF
KSKDYYSLFLDTVPADVQKLYTESDQQDWPSLALTAHRLKGVFAMLAFPAGKGLCEQLEEAIKRNDAEHVNVLISHIDAF
VSQLLQLGNQQYE
>Mature_892_residues
SLSGITRSYLLFLLLLLLGNLLYGYNYVNAYIGAKQNMLASVARQIQQRVETYRFITYQIYENIPAESTTDAVQTPRELR
LRPDIYLLDKVRHKTDALIFGQHDNATSALAQSLSRYLDVLWSASTDAYSLYYLNGQDNSLILISTMPMKDLSARYKDGY
LGNLVETRKAEMLQQSNALDLREGFSGLRKFRFLNAYYFTLRTTFNNPGHLATVIAFDLPVGDMLPDNLPATRFQLQEDQ
DSTSEWGGHDELPRAFTQLGWPWVTVNAPIYNTPLKIQFHIPTMTLTLDLARNNFWVLLINLALLILSAIGFYIIRHQYV
RPGKRMAAQLNAQQEMNQEIITHLPMGLLIYRFDSDTLVASNKLADHLLPHLSLNKIAAMADRHQGKVQVSVNNAMYEVQ
MVRSQQTPYSALFLIRNLDSEMLMSQKLKLTQAEYEKNLTARKTMTDNLGRELRDPLARIMQICESLRRDRDAGGQSPLD
DLWLESQHAQRLIDEITLLTAVESQDWAPPQGTFRLHERIDALLLRSLPAMRRKGLMLLGRVETDPAQQFNGDIATLERV
LEMLLHYAIITTAYGKIGLTIAPDAQRPGLLQITLSDTGAGVSSAERHNLRYPALAPAQRDRFARGSSLTYYLCAQLCRR
LGGELTIDSRHDIGTHYRFSCQMQALPLADQDDEKLLDGITIRLRITSEEIRSRVAQRLEGFGATLLTADAENDGAENHS
DLTLTDDPAQAQTDTLLLAADIDGFEEYAPQRIRANFNLTDALIDAILLLIERQMAVTEPPAQCEYAENTPLKIDNNPFK
SKDYYSLFLDTVPADVQKLYTESDQQDWPSLALTAHRLKGVFAMLAFPAGKGLCEQLEEAIKRNDAEHVNVLISHIDAFV
SQLLQLGNQQYE

Specific function: May serves as a phosphotransfer intermediate between RcsC and RcsB. It may acquire a phosphoryl group at His-842 from RcsC 'Asp-866' and transmit it to 'Asp-56' of RcsB [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HPt domain [H]

Homologues:

Organism=Escherichia coli, GI1788545, Length=868, Percent_Identity=40.2073732718894, Blast_Score=613, Evalue=1e-176,
Organism=Escherichia coli, GI145693157, Length=468, Percent_Identity=21.5811965811966, Blast_Score=84, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR008207
- InterPro:   IPR005467 [H]

Pfam domain/function: PF02518 HATPase_c; PF01627 Hpt [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 101013; Mature: 100881

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS50894 HPT ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSGITRSYLLFLLLLLLGNLLYGYNYVNAYIGAKQNMLASVARQIQQRVETYRFITYQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEE
IYENIPAESTTDAVQTPRELRLRPDIYLLDKVRHKTDALIFGQHDNATSALAQSLSRYLD
EHHCCCCCCCCHHHCCCHHHCCCCCEEEHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHH
VLWSASTDAYSLYYLNGQDNSLILISTMPMKDLSARYKDGYLGNLVETRKAEMLQQSNAL
HHHCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
DLREGFSGLRKFRFLNAYYFTLRTTFNNPGHLATVIAFDLPVGDMLPDNLPATRFQLQED
CHHHHHHHHHHHHHHHEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCC
QDSTSEWGGHDELPRAFTQLGWPWVTVNAPIYNTPLKIQFHIPTMTLTLDLARNNFWVLL
CCCCCCCCCCCHHHHHHHHCCCCEEEECCCEECCCEEEEEECCEEEEEEEECCCCEEEHH
INLALLILSAIGFYIIRHQYVRPGKRMAAQLNAQQEMNQEIITHLPMGLLIYRFDSDTLV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEE
ASNKLADHLLPHLSLNKIAAMADRHQGKVQVSVNNAMYEVQMVRSQQTPYSALFLIRNLD
EHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCEEEHHHHHCCCCCHHHHHHHHHCC
SEMLMSQKLKLTQAEYEKNLTARKTMTDNLGRELRDPLARIMQICESLRRDRDAGGQSPL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
DDLWLESQHAQRLIDEITLLTAVESQDWAPPQGTFRLHERIDALLLRSLPAMRRKGLMLL
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHCCCEEE
GRVETDPAQQFNGDIATLERVLEMLLHYAIITTAYGKIGLTIAPDAQRPGLLQITLSDTG
EECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCC
AGVSSAERHNLRYPALAPAQRDRFARGSSLTYYLCAQLCRRLGGELTIDSRHDIGTHYRF
CCCCCHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCEEEE
SCQMQALPLADQDDEKLLDGITIRLRITSEEIRSRVAQRLEGFGATLLTADAENDGAENH
EEEEEECCCCCCCHHHHHCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
SDLTLTDDPAQAQTDTLLLAADIDGFEEYAPQRIRANFNLTDALIDAILLLIERQMAVTE
CCEEECCCCCCCCCCEEEEEECCCCHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
PPAQCEYAENTPLKIDNNPFKSKDYYSLFLDTVPADVQKLYTESDQQDWPSLALTAHRLK
CCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHH
GVFAMLAFPAGKGLCEQLEEAIKRNDAEHVNVLISHIDAFVSQLLQLGNQQYE
HHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SLSGITRSYLLFLLLLLLGNLLYGYNYVNAYIGAKQNMLASVARQIQQRVETYRFITYQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEE
IYENIPAESTTDAVQTPRELRLRPDIYLLDKVRHKTDALIFGQHDNATSALAQSLSRYLD
EHHCCCCCCCCHHHCCCHHHCCCCCEEEHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHH
VLWSASTDAYSLYYLNGQDNSLILISTMPMKDLSARYKDGYLGNLVETRKAEMLQQSNAL
HHHCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
DLREGFSGLRKFRFLNAYYFTLRTTFNNPGHLATVIAFDLPVGDMLPDNLPATRFQLQED
CHHHHHHHHHHHHHHHEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCC
QDSTSEWGGHDELPRAFTQLGWPWVTVNAPIYNTPLKIQFHIPTMTLTLDLARNNFWVLL
CCCCCCCCCCCHHHHHHHHCCCCEEEECCCEECCCEEEEEECCEEEEEEEECCCCEEEHH
INLALLILSAIGFYIIRHQYVRPGKRMAAQLNAQQEMNQEIITHLPMGLLIYRFDSDTLV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEE
ASNKLADHLLPHLSLNKIAAMADRHQGKVQVSVNNAMYEVQMVRSQQTPYSALFLIRNLD
EHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCEEEHHHHHCCCCCHHHHHHHHHCC
SEMLMSQKLKLTQAEYEKNLTARKTMTDNLGRELRDPLARIMQICESLRRDRDAGGQSPL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
DDLWLESQHAQRLIDEITLLTAVESQDWAPPQGTFRLHERIDALLLRSLPAMRRKGLMLL
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHCCCEEE
GRVETDPAQQFNGDIATLERVLEMLLHYAIITTAYGKIGLTIAPDAQRPGLLQITLSDTG
EECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCC
AGVSSAERHNLRYPALAPAQRDRFARGSSLTYYLCAQLCRRLGGELTIDSRHDIGTHYRF
CCCCCHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCEEEE
SCQMQALPLADQDDEKLLDGITIRLRITSEEIRSRVAQRLEGFGATLLTADAENDGAENH
EEEEEECCCCCCCHHHHHCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC
SDLTLTDDPAQAQTDTLLLAADIDGFEEYAPQRIRANFNLTDALIDAILLLIERQMAVTE
CCEEECCCCCCCCCCEEEEEECCCCHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
PPAQCEYAENTPLKIDNNPFKSKDYYSLFLDTVPADVQKLYTESDQQDWPSLALTAHRLK
CCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHH
GVFAMLAFPAGKGLCEQLEEAIKRNDAEHVNVLISHIDAFVSQLLQLGNQQYE
HHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 2404948; 7984428; 11758943; 11309126 [H]