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The map label for this gene is ybhR [H]

Identifier: 238920514

GI number: 238920514

Start: 2513926

End: 2515038

Strand: Direct

Name: ybhR [H]

Synonym: NT01EI_2626

Alternate gene names: 238920514

Gene position: 2513926-2515038 (Clockwise)

Preceding gene: 238920513

Following gene: 238920515

Centisome position: 65.94

GC content: 60.74

Gene sequence:

>1113_bases
ATGCTGCACCGTCTGCTGACCCTGATCGTCAAAGAGCTGCAGTCCCTGTTGCGCGACCCGCAGACCCGGACCATTCTGGT
GGTTCCGGTACTGATGCAGGTGCTGCTGTTTCCCTTTGCCGCCACCCTCAACGTCACCAACGCCACCATCGCGGTATACA
GCGAAGACAGCGGCCCACTCTCCGTCGAGCTGACCCAGCGGCTGGCCAAGGCCAGCGCCTTCTCCCAGGTGATCCTGCTG
CACAGCCCGCAGGCGATTGCGCCGACCATCAATGACCAACGCGCGCTGCTGCTGGTACGCTTTCCTGCCAACTTCAGCCG
CGATCTGCTGAGCGGACAACCGACCACGCTGCAGCTGATCCTCGATGGCCGCAGCTCCAACAGCGCCCAGATCGCCGCCA
ACTACGTACAGCAGATCGTCAGCGACTACCAGCAGGCACTGATGCGCACGCGCAGCCAGCCCCCCTTGGTCAACAGCGCG
CTGATCGTCCGCAACTGGTATAACCCCAACCTGGACTACAAATGGTTCGTCGTACCCTCACTGATCGCCCTGATCGCCAC
CATCGGCGTGATGATCGTCACCTCGCTGTCGGTGGCGCGCGAGCGGGAGCAGGGAACCCTGGAGCAGCTGCTGGTCTCGC
CGCTGAACACCGGACAAATCTTCATCGGCAAAGCGGTGCCGGCAATGATCGTCGCCACCTTCCAGGCAACCCTGGTGCTG
CTGATCGGGATCTTTGGCTATCACATCCCCTTTGCCGGCTCCCTGTGGCTGTTTTACTTTACCCTGTTGGTATATGGCCT
GTCGCTGGTCGGCTTTGGGCTGTTTATCTCCTCGCTCTGTTCAACCCAGCAGCAGGCGTTTATCGGCGTCTTCGTCTTCA
TGATGCCGGCCATCCTGCTGTCGGGCTACGTCTCCCCGGTGGAGAATATGCCACTCTGGCTGCAGCACGTGACCTGGATT
AACCCGATCCGTCACTTTACCGACATCACCAAGCAGCTGTACCTAAAAAACGTCGGCTTTAGCGTGATCTGGCACAGCCT
GTGGCCGCTGCTGGTGATCACCGTCACCACCGGTGGCGCCGCCTATGCCATGTTCCGGCGTAAGATAGCCTGA

Upstream 100 bases:

>100_bases
CTGATGGTTAACCTGACCTTTATGCTGGCATCAGCGCTGATTTTCATCGGCCTGACGGCCCTGAAAACCCGGCGGCGGCT
GGACTGAGGAGGAGAAGAGC

Downstream 100 bases:

>100_bases
GGACGGCGCGGGGCAGATGTCAGCATCCGCCCCCCTTGCTATACTGCGCACAGCGTTTTTCTTGACTGACAGGATCGCCC
GCACGCTATGGAGCCGACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MLHRLLTLIVKELQSLLRDPQTRTILVVPVLMQVLLFPFAATLNVTNATIAVYSEDSGPLSVELTQRLAKASAFSQVILL
HSPQAIAPTINDQRALLLVRFPANFSRDLLSGQPTTLQLILDGRSSNSAQIAANYVQQIVSDYQQALMRTRSQPPLVNSA
LIVRNWYNPNLDYKWFVVPSLIALIATIGVMIVTSLSVAREREQGTLEQLLVSPLNTGQIFIGKAVPAMIVATFQATLVL
LIGIFGYHIPFAGSLWLFYFTLLVYGLSLVGFGLFISSLCSTQQQAFIGVFVFMMPAILLSGYVSPVENMPLWLQHVTWI
NPIRHFTDITKQLYLKNVGFSVIWHSLWPLLVITVTTGGAAYAMFRRKIA

Sequences:

>Translated_370_residues
MLHRLLTLIVKELQSLLRDPQTRTILVVPVLMQVLLFPFAATLNVTNATIAVYSEDSGPLSVELTQRLAKASAFSQVILL
HSPQAIAPTINDQRALLLVRFPANFSRDLLSGQPTTLQLILDGRSSNSAQIAANYVQQIVSDYQQALMRTRSQPPLVNSA
LIVRNWYNPNLDYKWFVVPSLIALIATIGVMIVTSLSVAREREQGTLEQLLVSPLNTGQIFIGKAVPAMIVATFQATLVL
LIGIFGYHIPFAGSLWLFYFTLLVYGLSLVGFGLFISSLCSTQQQAFIGVFVFMMPAILLSGYVSPVENMPLWLQHVTWI
NPIRHFTDITKQLYLKNVGFSVIWHSLWPLLVITVTTGGAAYAMFRRKIA
>Mature_370_residues
MLHRLLTLIVKELQSLLRDPQTRTILVVPVLMQVLLFPFAATLNVTNATIAVYSEDSGPLSVELTQRLAKASAFSQVILL
HSPQAIAPTINDQRALLLVRFPANFSRDLLSGQPTTLQLILDGRSSNSAQIAANYVQQIVSDYQQALMRTRSQPPLVNSA
LIVRNWYNPNLDYKWFVVPSLIALIATIGVMIVTSLSVAREREQGTLEQLLVSPLNTGQIFIGKAVPAMIVATFQATLVL
LIGIFGYHIPFAGSLWLFYFTLLVYGLSLVGFGLFISSLCSTQQQAFIGVFVFMMPAILLSGYVSPVENMPLWLQHVTWI
NPIRHFTDITKQLYLKNVGFSVIWHSLWPLLVITVTTGGAAYAMFRRKIA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=369, Percent_Identity=78.0487804878049, Blast_Score=587, Evalue=1e-169,
Organism=Escherichia coli, GI1787011, Length=337, Percent_Identity=27.299703264095, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI48994943, Length=355, Percent_Identity=25.6338028169014, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI226510979, Length=380, Percent_Identity=26.3157894736842, Blast_Score=117, Evalue=9e-28,
Organism=Drosophila melanogaster, GI85725260, Length=371, Percent_Identity=22.3719676549865, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI85725262, Length=179, Percent_Identity=26.2569832402235, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41117; Mature: 41117

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHRLLTLIVKELQSLLRDPQTRTILVVPVLMQVLLFPFAATLNVTNATIAVYSEDSGPL
CHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHEEECCEEEEEEECCCCCE
SVELTQRLAKASAFSQVILLHSPQAIAPTINDQRALLLVRFPANFSRDLLSGQPTTLQLI
EHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCEEEEE
LDGRSSNSAQIAANYVQQIVSDYQQALMRTRSQPPLVNSALIVRNWYNPNLDYKWFVVPS
EECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEHHHH
LIALIATIGVMIVTSLSVAREREQGTLEQLLVSPLNTGQIFIGKAVPAMIVATFQATLVL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHH
LIGIFGYHIPFAGSLWLFYFTLLVYGLSLVGFGLFISSLCSTQQQAFIGVFVFMMPAILL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGYVSPVENMPLWLQHVTWINPIRHFTDITKQLYLKNVGFSVIWHSLWPLLVITVTTGGA
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEECCCCH
AYAMFRRKIA
HHHHHHHHCC
>Mature Secondary Structure
MLHRLLTLIVKELQSLLRDPQTRTILVVPVLMQVLLFPFAATLNVTNATIAVYSEDSGPL
CHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHEEECCEEEEEEECCCCCE
SVELTQRLAKASAFSQVILLHSPQAIAPTINDQRALLLVRFPANFSRDLLSGQPTTLQLI
EHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCEEEEE
LDGRSSNSAQIAANYVQQIVSDYQQALMRTRSQPPLVNSALIVRNWYNPNLDYKWFVVPS
EECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEHHHH
LIALIATIGVMIVTSLSVAREREQGTLEQLLVSPLNTGQIFIGKAVPAMIVATFQATLVL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHH
LIGIFGYHIPFAGSLWLFYFTLLVYGLSLVGFGLFISSLCSTQQQAFIGVFVFMMPAILL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGYVSPVENMPLWLQHVTWINPIRHFTDITKQLYLKNVGFSVIWHSLWPLLVITVTTGGA
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEECCCCH
AYAMFRRKIA
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]