| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is artQ [H]
Identifier: 238920410
GI number: 238920410
Start: 2422029
End: 2422745
Strand: Direct
Name: artQ [H]
Synonym: NT01EI_2520
Alternate gene names: 238920410
Gene position: 2422029-2422745 (Clockwise)
Preceding gene: 238920409
Following gene: 238920411
Centisome position: 63.53
GC content: 61.65
Gene sequence:
>717_bases ATGATTGAATTGACCCCCTTATTACATGCCGCCGGCATCACTGTCGGTCTGGCTCTCTGCGCCCTGCTGCTCGGCCTGGT GTTCGCCATGCTGTTCGCCGTCTGGGAATCCGTCCGCTGTCGTCCGATGGCGCTGCTGGGCACCGCCTGGGTCACTCTGC TACGCGGACTGCCGGAGATACTGGTGGTACTGTTCATCTACTTCGGCTCGGCCCAAATGCTGCTGTGGCTCTCCGACGGC ATCGGCCTGAACCTGGGCTTTACCACGCTGCGACTGCAGCTGAATATCGAGAATTTCGAAGTCAGCCCGTTCCTGTGCGG CGTGCTGGCGCTGGCGCTGCTCTACGCCGCCTATGGCTCGCAGACCCTGCGCGGTGCGCTGAAGGCCGTACCGCAAGGGC AACGTGAGGCCGGAATGGCACTGGGGCTGAGTAACAGCCAGATATTCTTCCGCCTGGTGATGCCGCAGATGTGGCGCCAC GCCCTGCCGGGGCTGGGCAACCAGTGGCTGGTGCTGCTCAAGGATACCGCGCTGGTTTCGCTGATCAGCGTCAACGATCT GATGCTACAGACCAAGAGCATCGCCACCCGAACCCAGGAGCCCTTCACCTGGTACTGCATCGCGGCGGCGATCTACCTGG TGATCACCCTGTTCAGCCAATACGTTCTCAAGCGTATTGAGCTGCGTACCACCCGCTTTGAACGGAGTGCCGCATGA
Upstream 100 bases:
>100_bases GAAATAACCCCCGGGAACACCAGTAGGGCCTCTCTCCGTAGGCGTTATGGTTAGGATCATCCAGGCGGCGCGGGTCGCCT GATGGGATAGGCGTCAGAAA
Downstream 100 bases:
>100_bases TGTTGAGCTATATTCCGGATCTGCTGCAGGGGCTGCATACCAGCCTGTCGCTCACCGTGGTCTCCCTGCTGGTCGCCCTG GCGCTGGCGCTGTGCTTTAC
Product: arginine transporter permease subunit ArtQ
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MIELTPLLHAAGITVGLALCALLLGLVFAMLFAVWESVRCRPMALLGTAWVTLLRGLPEILVVLFIYFGSAQMLLWLSDG IGLNLGFTTLRLQLNIENFEVSPFLCGVLALALLYAAYGSQTLRGALKAVPQGQREAGMALGLSNSQIFFRLVMPQMWRH ALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYCIAAAIYLVITLFSQYVLKRIELRTTRFERSAA
Sequences:
>Translated_238_residues MIELTPLLHAAGITVGLALCALLLGLVFAMLFAVWESVRCRPMALLGTAWVTLLRGLPEILVVLFIYFGSAQMLLWLSDG IGLNLGFTTLRLQLNIENFEVSPFLCGVLALALLYAAYGSQTLRGALKAVPQGQREAGMALGLSNSQIFFRLVMPQMWRH ALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYCIAAAIYLVITLFSQYVLKRIELRTTRFERSAA >Mature_238_residues MIELTPLLHAAGITVGLALCALLLGLVFAMLFAVWESVRCRPMALLGTAWVTLLRGLPEILVVLFIYFGSAQMLLWLSDG IGLNLGFTTLRLQLNIENFEVSPFLCGVLALALLYAAYGSQTLRGALKAVPQGQREAGMALGLSNSQIFFRLVMPQMWRH ALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYCIAAAIYLVITLFSQYVLKRIELRTTRFERSAA
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4215
COG function: function code E; ABC-type arginine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787087, Length=235, Percent_Identity=78.7234042553192, Blast_Score=373, Evalue=1e-105, Organism=Escherichia coli, GI1788646, Length=223, Percent_Identity=33.6322869955157, Blast_Score=142, Evalue=2e-35, Organism=Escherichia coli, GI1788226, Length=230, Percent_Identity=30.4347826086957, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1787030, Length=223, Percent_Identity=29.5964125560538, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1787086, Length=236, Percent_Identity=25.8474576271186, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1788645, Length=218, Percent_Identity=29.8165137614679, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI1786873, Length=227, Percent_Identity=25.9911894273128, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1786874, Length=217, Percent_Identity=24.8847926267281, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI87082239, Length=146, Percent_Identity=30.8219178082192, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI48994930, Length=128, Percent_Identity=28.125, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 26336; Mature: 26336
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIELTPLLHAAGITVGLALCALLLGLVFAMLFAVWESVRCRPMALLGTAWVTLLRGLPEI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHH LVVLFIYFGSAQMLLWLSDGIGLNLGFTTLRLQLNIENFEVSPFLCGVLALALLYAAYGS HHHHHHHHCCCEEEEEEECCCCCEECEEEEEEEEEECCEECCHHHHHHHHHHHHHHHHCC QTLRGALKAVPQGQREAGMALGLSNSQIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVS HHHHHHHHHCCCCCHHCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHH LISVNDLMLQTKSIATRTQEPFTWYCIAAAIYLVITLFSQYVLKRIELRTTRFERSAA HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIELTPLLHAAGITVGLALCALLLGLVFAMLFAVWESVRCRPMALLGTAWVTLLRGLPEI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHH LVVLFIYFGSAQMLLWLSDGIGLNLGFTTLRLQLNIENFEVSPFLCGVLALALLYAAYGS HHHHHHHHCCCEEEEEEECCCCCEECEEEEEEEEEECCEECCHHHHHHHHHHHHHHHHCC QTLRGALKAVPQGQREAGMALGLSNSQIFFRLVMPQMWRHALPGLGNQWLVLLKDTALVS HHHHHHHHHCCCCCHHCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHH LISVNDLMLQTKSIATRTQEPFTWYCIAAAIYLVITLFSQYVLKRIELRTTRFERSAA HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]