| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is artI [H]
Identifier: 238920409
GI number: 238920409
Start: 2421204
End: 2421935
Strand: Direct
Name: artI [H]
Synonym: NT01EI_2519
Alternate gene names: 238920409
Gene position: 2421204-2421935 (Clockwise)
Preceding gene: 238920408
Following gene: 238920410
Centisome position: 63.51
GC content: 54.23
Gene sequence:
>732_bases ATGAAAAAAATCATAATTGCTGCGATATTAACCGGTATCAGCGTCTCTGCCACGGCGGCACAAACCATCCGTTTTGCCGC CGAAGCCTCATATCCGCCATTCGAGTTTATGGATGCACAGAATAAAATGCAGGGATTCGACGTCGATCTGGCCAACGCCA TCTGCCAGCAGATGAAGGCCACCTGTACCTTCAGCAACCAGTCCTTTGACAGTCTGATCCCCAGTCTGCGGTTCAAACGT ATCGATGCGGTGATCTCCAGCATGGATATCACGCCAGAACGGCAGAAACAGGTCGACTTCTCCCAGCCCTACTATGACAA TTCCGCACTGTTCATCGCCGAAAAAGGCAAGGTTGCCGACGTAGCCGCGCTGAAGGGCAAGCGCGTCGGGATCCAGAACG GCACCACCCATCAAAAATACCTGATGGATAAACACCCCGAGCTGACGCCGGTGCCCTATGACAGCTATCAGAACGCCATC CTCGATCTGAAGAATGGCCGTATCGATGCGGTATTCGGTGACACGGCAGTGGTCAATGAGTGGATGAAGCAAAACCCCAA TCTGGCGCCGGTCGGTACCAAGGTCACCGATGCCGACTACTTCGGTACCGGGCTGGGGATCGCCGTGCGCAAGGGCAATG GCCCGCTGCTGGAGCAGTTCAACGCGGCGCTGAACCAGCTCAAACAGGATGGCCAGTATCAGACTATCTATGACAAGTGG TTCCAGAAATAA
Upstream 100 bases:
>100_bases GGCGATGACAGCCACTTTAGTGATCCGCAGACCAGTGAGTTTGCCGGATATCTGTCCCACTGATGGCCACGAGGCCAAGG GTAACCCGTTGGAGTCTGCG
Downstream 100 bases:
>100_bases CCCCCGGGAACACCAGTAGGGCCTCTCTCCGTAGGCGTTATGGTTAGGATCATCCAGGCGGCGCGGGTCGCCTGATGGGA TAGGCGTCAGAAAATGATTG
Product: arginine-binding periplasmic protein 1
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MKKIIIAAILTGISVSATAAQTIRFAAEASYPPFEFMDAQNKMQGFDVDLANAICQQMKATCTFSNQSFDSLIPSLRFKR IDAVISSMDITPERQKQVDFSQPYYDNSALFIAEKGKVADVAALKGKRVGIQNGTTHQKYLMDKHPELTPVPYDSYQNAI LDLKNGRIDAVFGDTAVVNEWMKQNPNLAPVGTKVTDADYFGTGLGIAVRKGNGPLLEQFNAALNQLKQDGQYQTIYDKW FQK
Sequences:
>Translated_243_residues MKKIIIAAILTGISVSATAAQTIRFAAEASYPPFEFMDAQNKMQGFDVDLANAICQQMKATCTFSNQSFDSLIPSLRFKR IDAVISSMDITPERQKQVDFSQPYYDNSALFIAEKGKVADVAALKGKRVGIQNGTTHQKYLMDKHPELTPVPYDSYQNAI LDLKNGRIDAVFGDTAVVNEWMKQNPNLAPVGTKVTDADYFGTGLGIAVRKGNGPLLEQFNAALNQLKQDGQYQTIYDKW FQK >Mature_243_residues MKKIIIAAILTGISVSATAAQTIRFAAEASYPPFEFMDAQNKMQGFDVDLANAICQQMKATCTFSNQSFDSLIPSLRFKR IDAVISSMDITPERQKQVDFSQPYYDNSALFIAEKGKVADVAALKGKRVGIQNGTTHQKYLMDKHPELTPVPYDSYQNAI LDLKNGRIDAVFGDTAVVNEWMKQNPNLAPVGTKVTDADYFGTGLGIAVRKGNGPLLEQFNAALNQLKQDGQYQTIYDKW FQK
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787088, Length=243, Percent_Identity=69.9588477366255, Blast_Score=378, Evalue=1e-106, Organism=Escherichia coli, GI1787085, Length=241, Percent_Identity=61.8257261410788, Blast_Score=324, Evalue=3e-90, Organism=Escherichia coli, GI1788649, Length=253, Percent_Identity=37.1541501976285, Blast_Score=169, Evalue=1e-43, Organism=Escherichia coli, GI1788648, Length=229, Percent_Identity=36.6812227074236, Blast_Score=150, Evalue=8e-38, Organism=Escherichia coli, GI1788228, Length=254, Percent_Identity=31.8897637795276, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI1787031, Length=246, Percent_Identity=33.739837398374, Blast_Score=118, Evalue=3e-28,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 26948; Mature: 26948
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIIIAAILTGISVSATAAQTIRFAAEASYPPFEFMDAQNKMQGFDVDLANAICQQMKA CCCEEEEHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHCCHHHHCCCCCHHHHHHHHHHHH TCTFSNQSFDSLIPSLRFKRIDAVISSMDITPERQKQVDFSQPYYDNSALFIAEKGKVAD HEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCEEEEECCCCEEH VAALKGKRVGIQNGTTHQKYLMDKHPELTPVPYDSYQNAILDLKNGRIDAVFGDTAVVNE HHHHCCCEECCCCCCCHHHHHHHCCCCCCCCCCCCHHHHEEECCCCEEEEEECCHHHHHH WMKQNPNLAPVGTKVTDADYFGTGLGIAVRKGNGPLLEQFNAALNQLKQDGQYQTIYDKW HHHCCCCCCCCCCEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEHHHHHH FQK HCC >Mature Secondary Structure MKKIIIAAILTGISVSATAAQTIRFAAEASYPPFEFMDAQNKMQGFDVDLANAICQQMKA CCCEEEEHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHCCHHHHCCCCCHHHHHHHHHHHH TCTFSNQSFDSLIPSLRFKRIDAVISSMDITPERQKQVDFSQPYYDNSALFIAEKGKVAD HEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCEEEEECCCCEEH VAALKGKRVGIQNGTTHQKYLMDKHPELTPVPYDSYQNAILDLKNGRIDAVFGDTAVVNE HHHHCCCEECCCCCCCHHHHHHHCCCCCCCCCCCCHHHHEEECCCCEEEEEECCHHHHHH WMKQNPNLAPVGTKVTDADYFGTGLGIAVRKGNGPLLEQFNAALNQLKQDGQYQTIYDKW HHHCCCCCCCCCCEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEHHHHHH FQK HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]