Click here to switch to the map view.

The map label for this gene is ybjE [H]

Identifier: 238920388

GI number: 238920388

Start: 2393878

End: 2394777

Strand: Direct

Name: ybjE [H]

Synonym: NT01EI_2498

Alternate gene names: 238920388

Gene position: 2393878-2394777 (Clockwise)

Preceding gene: 238920384

Following gene: 238920390

Centisome position: 62.79

GC content: 61.67

Gene sequence:

>900_bases
ATGTACTCTGGACTCTTGATCATTCTGGTACCACTCCTGCTTGGCTACCTGCTGCACCTGCGTCATAAGACGCTGATCCG
TTTAATTAACCGTATGCTGAGCTGGATGGTATACGTCATCCTGTTTTTTATGGGGATCAGCCTGGCATTTCTCGATAACC
TGGGCGCGAATCTGTGGCTGATCGGCAAATATGCCACGGTCTTTTTCGTGCTGATTATCGCGGCCAACCTGCTGGCGCTA
TGGCTGTTGGAAAAACGCACCCCCTGGTACGTCCCCCACCGTCAGGAGGCTCTGCCATCGCGCCTCCATATGGCACTGGA
GTCCCTGAAGCTGTGCGGCGTCGTGGTGGGCGGCTTCCTGCTGGGCCTCACCCAGTGGCCATGGCTGAGCCACGCCACCC
ACGCCAGCGAATACGCCCTGATCCTGCTGCTGTTTCTGGTCGGTCTCCAGCTGCGCAACAGCGGTATGTCGCCAGGTCAG
ATCCTGCTGAACCGCCGCGGTATGATGATAGGCTGTGTCGTCTGCGTCAGCGCCCTGGCCGGGGGCGCCCTGGCCGCCTG
GCTGCTGGGTCTGCCCCTGAAGACCGGCCTGGCTATCGCCTCGGCCTATGGCTGGTACTCCCTGTCCGGCATCATGCTGA
CCGAGGCCTTTGGCCCGGTGATCGGCAGCGCCGCCTTCTTTAACGATCTGGCGCGTGAACTGTTTGCTATCATGATGATC
CCGACGCTGATCCAGCGCCACCGCAGCAGCGCGCTGGGCCTGTGCGGCGCCACCTCCATGGACTTTACCCTGCCGGTACT
GCAGCGCAGCGGCGGCATTGAGCTGGTGCCGGCGGCGATTGTACACGGCTTCCTGCTCAGCCTGCTGGCGCCGGTGCTGA
TGGCGCTGTTCTCCTCCTGA

Upstream 100 bases:

>100_bases
GGTAAAGATCCCTTTTTACTTCCCTCGCGGACGCTGCGCCTTTACTCAAATCCCCCTTTTGAGTACGGTATTAGCTTTAA
ATTTAACATGTTAGGCTCTT

Downstream 100 bases:

>100_bases
CCCCACCGGGCGGCGCTCCCGTGCCGCCCTTCACCCTTCACCCTTCACCCTTCACCCTTCACCCTTCACCCTTCACCCTT
CACCCTTCACCCTTCACCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MYSGLLIILVPLLLGYLLHLRHKTLIRLINRMLSWMVYVILFFMGISLAFLDNLGANLWLIGKYATVFFVLIIAANLLAL
WLLEKRTPWYVPHRQEALPSRLHMALESLKLCGVVVGGFLLGLTQWPWLSHATHASEYALILLLFLVGLQLRNSGMSPGQ
ILLNRRGMMIGCVVCVSALAGGALAAWLLGLPLKTGLAIASAYGWYSLSGIMLTEAFGPVIGSAAFFNDLARELFAIMMI
PTLIQRHRSSALGLCGATSMDFTLPVLQRSGGIELVPAAIVHGFLLSLLAPVLMALFSS

Sequences:

>Translated_299_residues
MYSGLLIILVPLLLGYLLHLRHKTLIRLINRMLSWMVYVILFFMGISLAFLDNLGANLWLIGKYATVFFVLIIAANLLAL
WLLEKRTPWYVPHRQEALPSRLHMALESLKLCGVVVGGFLLGLTQWPWLSHATHASEYALILLLFLVGLQLRNSGMSPGQ
ILLNRRGMMIGCVVCVSALAGGALAAWLLGLPLKTGLAIASAYGWYSLSGIMLTEAFGPVIGSAAFFNDLARELFAIMMI
PTLIQRHRSSALGLCGATSMDFTLPVLQRSGGIELVPAAIVHGFLLSLLAPVLMALFSS
>Mature_299_residues
MYSGLLIILVPLLLGYLLHLRHKTLIRLINRMLSWMVYVILFFMGISLAFLDNLGANLWLIGKYATVFFVLIIAANLLAL
WLLEKRTPWYVPHRQEALPSRLHMALESLKLCGVVVGGFLLGLTQWPWLSHATHASEYALILLLFLVGLQLRNSGMSPGQ
ILLNRRGMMIGCVVCVSALAGGALAAWLLGLPLKTGLAIASAYGWYSLSGIMLTEAFGPVIGSAAFFNDLARELFAIMMI
PTLIQRHRSSALGLCGATSMDFTLPVLQRSGGIELVPAAIVHGFLLSLLAPVLMALFSS

Specific function: Unknown

COG id: COG2431

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1452 [H]

Homologues:

Organism=Escherichia coli, GI87081795, Length=299, Percent_Identity=67.2240802675585, Blast_Score=390, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005642
- ProDom:   PD022789 [H]

Pfam domain/function: PF03956 DUF340 [H]

EC number: NA

Molecular weight: Translated: 32658; Mature: 32658

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSGLLIILVPLLLGYLLHLRHKTLIRLINRMLSWMVYVILFFMGISLAFLDNLGANLWL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
IGKYATVFFVLIIAANLLALWLLEKRTPWYVPHRQEALPSRLHMALESLKLCGVVVGGFL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLTQWPWLSHATHASEYALILLLFLVGLQLRNSGMSPGQILLNRRGMMIGCVVCVSALA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHH
GGALAAWLLGLPLKTGLAIASAYGWYSLSGIMLTEAFGPVIGSAAFFNDLARELFAIMMI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PTLIQRHRSSALGLCGATSMDFTLPVLQRSGGIELVPAAIVHGFLLSLLAPVLMALFSS
HHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYSGLLIILVPLLLGYLLHLRHKTLIRLINRMLSWMVYVILFFMGISLAFLDNLGANLWL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
IGKYATVFFVLIIAANLLALWLLEKRTPWYVPHRQEALPSRLHMALESLKLCGVVVGGFL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLTQWPWLSHATHASEYALILLLFLVGLQLRNSGMSPGQILLNRRGMMIGCVVCVSALA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHH
GGALAAWLLGLPLKTGLAIASAYGWYSLSGIMLTEAFGPVIGSAAFFNDLARELFAIMMI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PTLIQRHRSSALGLCGATSMDFTLPVLQRSGGIELVPAAIVHGFLLSLLAPVLMALFSS
HHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]