Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is hcp

Identifier: 238920390

GI number: 238920390

Start: 2395192

End: 2396847

Strand: Direct

Name: hcp

Synonym: NT01EI_2500

Alternate gene names: 238920390

Gene position: 2395192-2396847 (Clockwise)

Preceding gene: 238920388

Following gene: 238920391

Centisome position: 62.83

GC content: 63.1

Gene sequence:

>1656_bases
ATGTACTGCGTTCAATGCGAGCAAACCATCCGTACCCCGGCCGGCAATGGCTGTTCCTACGCCCAAGGGATGTGCGGCAA
GAGTGCTGAAACCTCCGACCTGCAAGACCTGCTGGTCGCCGCACTGCAAAGCCTCTCCGCCTGGGCGCTGCTGGCCCGCG
AGCTGGATATCCGCGATCGCACCATCGACAGCTTTGCGCCGCGCGCCTTCTTCGCCACCCTGACCAACGTCAACTTCGAC
TCTGCGCGCATCATCGGCTACGCCCGCGAGGCGCTGGCGATGCGCGACAGCCTGCGCACTGCGTGCCTGGCCAAGGCACC
GGGCACGCAGTGCGACCATCCGCTGGCCGATCTGCGCCTGCAGGGAGAGGATGTGGCGACCCTGCGCCGCCAGGCGGCAG
AGTTCGCCCTGGACAGCGATCGGGCCGAGATCGGCGACGATATCCACGGCCTGCGCATGCTCAGCCTATACGGTCTGAAA
GGCGCCGCGGCCTATATGGAGCATGCCCATGTGCTGGGCCAGCATAGCGAGGCGATCTACGCCCAGTATCACCACTATAT
GGCCTGGCTCGGCACCCGGCCGTGCGATATGGATACCCTGCTGGACAATGCCATGGGCATCGGCAAGATGAACTTCGCCA
TCATGGCGCAGCTGGATAAGGGGGAGACCGAGGCCTACGGCGATCCCACCCCGACCTCCGTCAACGTGCGGCCGCTCGCC
GGTAAATGCATCCTGATCTCCGGTCACGATCTGAAGGATCTGCAGATGCTGCTGGAGCAGACCGACGGCCTCGGGATCAA
CGTCTATACCCACGGTGAAATGCTGCCGGCCCACGGCTATCCCGAACTGCGAAAATACCGCCACCTGGTCGGTAACTACG
GCAGCGGCTGGCAGAATCAGCAGCAGGAGTTTGCCCGCTTCCCCGGCCCGATCCTGATGACCTCCAACTGCATCATCGAT
CCCAACGTTGGCAACTACAGCGATCGCATCTGGACCCGCAGCATCGTCGGCTGGCCGGGCGTACGCCATCTGGAAGGCGA
TGATTTCAGCCAGGTGATCGCCCAGGCGCAGGTCTGCGATGGCTTCCCCTACAGCGAGATCGAACACCTGATCACCGTCG
GCTTTGGCCGCGCCACCCTGCTCAACGCGGCGGACAGCGTGATCGATCTGGTTGCCCAGAAAAAGCTGCGCCACGTATTT
CTGCTCGGCGGCTGCGACGGCAGCCGCGATGAGCGCAGCTACTACACCGATTTTGCCCGCGCCATCCCACAGGATTGCCT
GATCATGACCCTGGCCTGCGGTAAGTACCGTTTTAACAAGCTGGAGTTCGGCACGCTGGAGGGGCTGCCGCGCCTGCTGG
ACGTCGGCCAGTGCAACGACGCCTACGGCGCCATCATGCTGGCGGTCAATCTGGCAGAGAAGCTCGGCTGCGGCATCAAC
GATCTGCCGCTCAGTCTGATCCTCTCCTGGTTTGAGCAGAAGGCCATCGTCATCCTGCTGACCCTGCTGGCGCTGGGCGT
CAAAAACATCTACACCGGGCCGACCGCACCGGGTTTCCTGACGGATAATCTTCTGGCGATCCTCAACCAGCGCTTCGGCA
TGCGCGCCATCAGCACGGTCGACGCCGATCTGAACGGTATACTCGGCCACGCCTAA

Upstream 100 bases:

>100_bases
AAACAAAGTAAAAGTTGCATTAAAAACTCCTTTTTCGAACGCGATGCCAGGATTACCTTTAAAAAGGCATAATAAATACA
ACTTTAAAAGAGGGTTTTCC

Downstream 100 bases:

>100_bases
CCCGGCAATCTGAAGTGCCCCGAGCCGTCTGGTACGGGGCGAAATACTGACTGCGAGACGCCATCACCATGACCATGCCA
ACCCCCCTTTGCCCCCACCG

Product: hydroxylamine reductase

Products: NA

Alternate protein names: Hybrid-cluster protein; HCP

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MYCVQCEQTIRTPAGNGCSYAQGMCGKSAETSDLQDLLVAALQSLSAWALLARELDIRDRTIDSFAPRAFFATLTNVNFD
SARIIGYAREALAMRDSLRTACLAKAPGTQCDHPLADLRLQGEDVATLRRQAAEFALDSDRAEIGDDIHGLRMLSLYGLK
GAAAYMEHAHVLGQHSEAIYAQYHHYMAWLGTRPCDMDTLLDNAMGIGKMNFAIMAQLDKGETEAYGDPTPTSVNVRPLA
GKCILISGHDLKDLQMLLEQTDGLGINVYTHGEMLPAHGYPELRKYRHLVGNYGSGWQNQQQEFARFPGPILMTSNCIID
PNVGNYSDRIWTRSIVGWPGVRHLEGDDFSQVIAQAQVCDGFPYSEIEHLITVGFGRATLLNAADSVIDLVAQKKLRHVF
LLGGCDGSRDERSYYTDFARAIPQDCLIMTLACGKYRFNKLEFGTLEGLPRLLDVGQCNDAYGAIMLAVNLAEKLGCGIN
DLPLSLILSWFEQKAIVILLTLLALGVKNIYTGPTAPGFLTDNLLAILNQRFGMRAISTVDADLNGILGHA

Sequences:

>Translated_551_residues
MYCVQCEQTIRTPAGNGCSYAQGMCGKSAETSDLQDLLVAALQSLSAWALLARELDIRDRTIDSFAPRAFFATLTNVNFD
SARIIGYAREALAMRDSLRTACLAKAPGTQCDHPLADLRLQGEDVATLRRQAAEFALDSDRAEIGDDIHGLRMLSLYGLK
GAAAYMEHAHVLGQHSEAIYAQYHHYMAWLGTRPCDMDTLLDNAMGIGKMNFAIMAQLDKGETEAYGDPTPTSVNVRPLA
GKCILISGHDLKDLQMLLEQTDGLGINVYTHGEMLPAHGYPELRKYRHLVGNYGSGWQNQQQEFARFPGPILMTSNCIID
PNVGNYSDRIWTRSIVGWPGVRHLEGDDFSQVIAQAQVCDGFPYSEIEHLITVGFGRATLLNAADSVIDLVAQKKLRHVF
LLGGCDGSRDERSYYTDFARAIPQDCLIMTLACGKYRFNKLEFGTLEGLPRLLDVGQCNDAYGAIMLAVNLAEKLGCGIN
DLPLSLILSWFEQKAIVILLTLLALGVKNIYTGPTAPGFLTDNLLAILNQRFGMRAISTVDADLNGILGHA
>Mature_551_residues
MYCVQCEQTIRTPAGNGCSYAQGMCGKSAETSDLQDLLVAALQSLSAWALLARELDIRDRTIDSFAPRAFFATLTNVNFD
SARIIGYAREALAMRDSLRTACLAKAPGTQCDHPLADLRLQGEDVATLRRQAAEFALDSDRAEIGDDIHGLRMLSLYGLK
GAAAYMEHAHVLGQHSEAIYAQYHHYMAWLGTRPCDMDTLLDNAMGIGKMNFAIMAQLDKGETEAYGDPTPTSVNVRPLA
GKCILISGHDLKDLQMLLEQTDGLGINVYTHGEMLPAHGYPELRKYRHLVGNYGSGWQNQQQEFARFPGPILMTSNCIID
PNVGNYSDRIWTRSIVGWPGVRHLEGDDFSQVIAQAQVCDGFPYSEIEHLITVGFGRATLLNAADSVIDLVAQKKLRHVF
LLGGCDGSRDERSYYTDFARAIPQDCLIMTLACGKYRFNKLEFGTLEGLPRLLDVGQCNDAYGAIMLAVNLAEKLGCGIN
DLPLSLILSWFEQKAIVILLTLLALGVKNIYTGPTAPGFLTDNLLAILNQRFGMRAISTVDADLNGILGHA

Specific function: Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O

COG id: COG1151

COG function: function code C; 6Fe-6S prismane cluster-containing protein

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HCP family

Homologues:

Organism=Escherichia coli, GI87081794, Length=548, Percent_Identity=74.6350364963504, Blast_Score=874, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): HCP_EDWI9 (C5BEA9)

Other databases:

- EMBL:   CP001600
- RefSeq:   YP_002933905.1
- GeneID:   7958838
- GenomeReviews:   CP001600_GR
- KEGG:   eic:NT01EI_2500
- OMA:   QEHIDMA
- ProtClustDB:   PRK05290
- GO:   GO:0005737
- HAMAP:   MF_00069
- InterPro:   IPR010048
- InterPro:   IPR004137
- InterPro:   IPR011254
- InterPro:   IPR016099
- InterPro:   IPR016100
- Gene3D:   G3DSA:3.40.50.2030
- Gene3D:   G3DSA:1.20.1270.20
- PIRSF:   PIRSF000076
- TIGRFAMs:   TIGR01703

Pfam domain/function: PF03063 Prismane; SSF56821 Prismane_like

EC number: NA

Molecular weight: Translated: 60435; Mature: 60435

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYCVQCEQTIRTPAGNGCSYAQGMCGKSAETSDLQDLLVAALQSLSAWALLARELDIRDR
CEEEECHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TIDSFAPRAFFATLTNVNFDSARIIGYAREALAMRDSLRTACLAKAPGTQCDHPLADLRL
HHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCEE
QGEDVATLRRQAAEFALDSDRAEIGDDIHGLRMLSLYGLKGAAAYMEHAHVLGQHSEAIY
CCCHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH
AQYHHYMAWLGTRPCDMDTLLDNAMGIGKMNFAIMAQLDKGETEAYGDPTPTSVNVRPLA
HHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECC
GKCILISGHDLKDLQMLLEQTDGLGINVYTHGEMLPAHGYPELRKYRHLVGNYGSGWQNQ
CEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCHH
QQEFARFPGPILMTSNCIIDPNVGNYSDRIWTRSIVGWPGVRHLEGDDFSQVIAQAQVCD
HHHHHHCCCCEEEECCEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHC
GFPYSEIEHLITVGFGRATLLNAADSVIDLVAQKKLRHVFLLGGCDGSRDERSYYTDFAR
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHH
AIPQDCLIMTLACGKYRFNKLEFGTLEGLPRLLDVGQCNDAYGAIMLAVNLAEKLGCGIN
HCCHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC
DLPLSLILSWFEQKAIVILLTLLALGVKNIYTGPTAPGFLTDNLLAILNQRFGMRAISTV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH
DADLNGILGHA
CCCHHHHCCCC
>Mature Secondary Structure
MYCVQCEQTIRTPAGNGCSYAQGMCGKSAETSDLQDLLVAALQSLSAWALLARELDIRDR
CEEEECHHHHCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TIDSFAPRAFFATLTNVNFDSARIIGYAREALAMRDSLRTACLAKAPGTQCDHPLADLRL
HHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCEE
QGEDVATLRRQAAEFALDSDRAEIGDDIHGLRMLSLYGLKGAAAYMEHAHVLGQHSEAIY
CCCHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH
AQYHHYMAWLGTRPCDMDTLLDNAMGIGKMNFAIMAQLDKGETEAYGDPTPTSVNVRPLA
HHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECC
GKCILISGHDLKDLQMLLEQTDGLGINVYTHGEMLPAHGYPELRKYRHLVGNYGSGWQNQ
CEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCHH
QQEFARFPGPILMTSNCIIDPNVGNYSDRIWTRSIVGWPGVRHLEGDDFSQVIAQAQVCD
HHHHHHCCCCEEEECCEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHC
GFPYSEIEHLITVGFGRATLLNAADSVIDLVAQKKLRHVFLLGGCDGSRDERSYYTDFAR
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHH
AIPQDCLIMTLACGKYRFNKLEFGTLEGLPRLLDVGQCNDAYGAIMLAVNLAEKLGCGIN
HCCHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCC
DLPLSLILSWFEQKAIVILLTLLALGVKNIYTGPTAPGFLTDNLLAILNQRFGMRAISTV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH
DADLNGILGHA
CCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA