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The map label for this gene is ynfH [H]

Identifier: 238920365

GI number: 238920365

Start: 2366361

End: 2367221

Strand: Reverse

Name: ynfH [H]

Synonym: NT01EI_2475

Alternate gene names: 238920365

Gene position: 2367221-2366361 (Counterclockwise)

Preceding gene: 238920366

Following gene: 238920364

Centisome position: 62.09

GC content: 64.34

Gene sequence:

>861_bases
ATGGGAATGGGATGGCATGAATGGCCGTTGATGATCTTCACGGTGCTGGGGCAGAGCGTGGCCGGTGCCTTTATCGTGAT
GGCGGCGGTACTGCTGCGCGGGAATCTGGAGGCCGATCGCGCCCTGCGGATCCAGGGGAGGATGTTCTTCCTGTGGCTGC
TGCTGGGGATCGCCTTTATGGCCTCGGCGCTGCATCTGGGCTCGCCGCTGCGCGCCATGAACTCGCTGAACCGGATCGGG
GCCTCTGGGTTGAGCAACGAGATCCTGTGCGGTTCGCTGTTCTTTGCCGCCGGGGGACTGTACTGGTTGCTGGCGGTATT
GGGCAAGATGCCCGTCGTCCTGGGGCGCCTGTGGCTGATGCTGACGATGGCGATGGCGCTGCTGTTTGTCTGGGGGATGA
GTCAGGTGTACCAGATCAATACGGTGCCGACCTGGTATAGCGGGTATACCACGCTGAGTTTCTTTGTCACCATGCTGATC
GGCGGGCCGCTGCTGGGCTATCTGCTGCTGCGCTCGGTGGAGATGGAGAGCGCCTCGCTGTACCTGCTGCCCCTGATTAG
CTGCTTCGCCGCGCTGGTCGGCGTGGTGTCCGCCGGCATGCAGGGGAGTGGTCTGGCCACTATCCACAGCGCGGTGCAGC
AGGCCTATGCCCTGGTTCCGGATTTTGCCGGTCTGCTGGCGCTGCGCAGCGTGCTGCTGGCGCTTGGGCTGGGCTGCTGG
CTGTGTCCGCTGCTGCGCAGCAGGGCACCGTCGCCGATGACGCTGGCGCTTGCCCTGATTCTGGTACTGGCGGGTGAGCT
GGTGGGACGCGGGGTGTTCTATGGCCTGCATATGAGCGTCGGCGTGGTGGTTTCCGGCTGA

Upstream 100 bases:

>100_bases
GCGCACTATACCCGGCCGAACCTGGTGCTGAAGCCGAATGCCAACAGCCGTCCGGTTGGTGATACCTGCGGCTACCTGGC
AAATCCAAAGGAGGTCTGAG

Downstream 100 bases:

>100_bases
TGACAGAGTGGGGCGGTGCCAGGGCGCCGCCCAATAGCGTAAGGAATGCGTTGGTTATGTTACAACCTGAACAACTGCAG
GATATGGCGCTGACGGCGCG

Product: dmso reductase anchor subunit

Products: NA

Alternate protein names: DMSO reductase anchor subunit ynfH [H]

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MGMGWHEWPLMIFTVLGQSVAGAFIVMAAVLLRGNLEADRALRIQGRMFFLWLLLGIAFMASALHLGSPLRAMNSLNRIG
ASGLSNEILCGSLFFAAGGLYWLLAVLGKMPVVLGRLWLMLTMAMALLFVWGMSQVYQINTVPTWYSGYTTLSFFVTMLI
GGPLLGYLLLRSVEMESASLYLLPLISCFAALVGVVSAGMQGSGLATIHSAVQQAYALVPDFAGLLALRSVLLALGLGCW
LCPLLRSRAPSPMTLALALILVLAGELVGRGVFYGLHMSVGVVVSG

Sequences:

>Translated_286_residues
MGMGWHEWPLMIFTVLGQSVAGAFIVMAAVLLRGNLEADRALRIQGRMFFLWLLLGIAFMASALHLGSPLRAMNSLNRIG
ASGLSNEILCGSLFFAAGGLYWLLAVLGKMPVVLGRLWLMLTMAMALLFVWGMSQVYQINTVPTWYSGYTTLSFFVTMLI
GGPLLGYLLLRSVEMESASLYLLPLISCFAALVGVVSAGMQGSGLATIHSAVQQAYALVPDFAGLLALRSVLLALGLGCW
LCPLLRSRAPSPMTLALALILVLAGELVGRGVFYGLHMSVGVVVSG
>Mature_285_residues
GMGWHEWPLMIFTVLGQSVAGAFIVMAAVLLRGNLEADRALRIQGRMFFLWLLLGIAFMASALHLGSPLRAMNSLNRIGA
SGLSNEILCGSLFFAAGGLYWLLAVLGKMPVVLGRLWLMLTMAMALLFVWGMSQVYQINTVPTWYSGYTTLSFFVTMLIG
GPLLGYLLLRSVEMESASLYLLPLISCFAALVGVVSAGMQGSGLATIHSAVQQAYALVPDFAGLLALRSVLLALGLGCWL
CPLLRSRAPSPMTLALALILVLAGELVGRGVFYGLHMSVGVVVSG

Specific function: Terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds. The C subunit anchors the other two subunits to the membrane and stabilize the catalytic subunits [H]

COG id: COG3302

COG function: function code R; DMSO reductase anchor subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli dmsC [H]

Homologues:

Organism=Escherichia coli, GI1787873, Length=291, Percent_Identity=57.7319587628866, Blast_Score=301, Evalue=3e-83,
Organism=Escherichia coli, GI1787123, Length=286, Percent_Identity=58.041958041958, Blast_Score=291, Evalue=3e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007059 [H]

Pfam domain/function: PF04976 DmsC [H]

EC number: NA

Molecular weight: Translated: 30562; Mature: 30431

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMGWHEWPLMIFTVLGQSVAGAFIVMAAVLLRGNLEADRALRIQGRMFFLWLLLGIAFM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
ASALHLGSPLRAMNSLNRIGASGLSNEILCGSLFFAAGGLYWLLAVLGKMPVVLGRLWLM
HHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTMAMALLFVWGMSQVYQINTVPTWYSGYTTLSFFVTMLIGGPLLGYLLLRSVEMESASL
HHHHHHHHHHHCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
YLLPLISCFAALVGVVSAGMQGSGLATIHSAVQQAYALVPDFAGLLALRSVLLALGLGCW
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCPLLRSRAPSPMTLALALILVLAGELVGRGVFYGLHMSVGVVVSG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
>Mature Secondary Structure 
GMGWHEWPLMIFTVLGQSVAGAFIVMAAVLLRGNLEADRALRIQGRMFFLWLLLGIAFM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
ASALHLGSPLRAMNSLNRIGASGLSNEILCGSLFFAAGGLYWLLAVLGKMPVVLGRLWLM
HHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTMAMALLFVWGMSQVYQINTVPTWYSGYTTLSFFVTMLIGGPLLGYLLLRSVEMESASL
HHHHHHHHHHHCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
YLLPLISCFAALVGVVSAGMQGSGLATIHSAVQQAYALVPDFAGLLALRSVLLALGLGCW
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCPLLRSRAPSPMTLALALILVLAGELVGRGVFYGLHMSVGVVVSG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]