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The map label for this gene is dmsD [H]

Identifier: 238920363

GI number: 238920363

Start: 2365689

End: 2366216

Strand: Reverse

Name: dmsD [H]

Synonym: NT01EI_2473

Alternate gene names: 238920363

Gene position: 2366216-2365689 (Counterclockwise)

Preceding gene: 238920364

Following gene: 238920362

Centisome position: 62.07

GC content: 67.05

Gene sequence:

>528_bases
GTGGCTCCGCTGGTGGCGCTGCTGCGTCAGCCACAGGAGACGCTGCGCTGGCCCTATGGCTCGTCGGCGCAGCGTGAACA
CTGCGCCGCGCTATTGTGCGCCCCTGCGCAGGAGTCGCTGGCCTCGGCTCATCAGCGGCTGTTTATCGGCCCCCATGCGC
TGACGGCGCCGCCCTGGGGATCGGTCTATCTGGATCGGGAGAGCGTGCTGTTCGGTGAGTCTACCCTGGCGCTGCGCCAC
TGGATGGGTGAGCAGGGGATCAGCTGGCAGTCAGACGCCCGCGAGCCGGAGGATCATATCGGTATTTTGCTGCTGATGAC
CGCCTGGCTGGCCGAGGGGCAGCCGCAGCAGCTTCCGGCACTGCTGCAGCAACATCTGTTGCCGTGGGGCGGACGCTATC
TGACGCTGCTGCAGCAGGGCGCGGATCATCCGTTTTATCAGGGGCTGGCGTCGCTGGCGGCGTTGACGCTGCAGGCGTGG
CAGCGCCAGCTCGCCATCGCCGACAGCGATGTACGGCTCTATCGCTGA

Upstream 100 bases:

>100_bases
AATGCGTTGGTTATGTTACAACCTGAACAACTGCAGGATATGGCGCTGACGGCGCGGGCGCTGGGGGGCCTTGTTATACT
GGCCGCCGGACAGTGAGCAG

Downstream 100 bases:

>100_bases
TGGGCGGCCGTCGCGACGAACGCTACTATCGCGCCTGGATGATGCACCGTCACGTCAGCCGGCGTGGCCTGCTGCGCGGT
CTGCTGGGGGGAGGGCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MAPLVALLRQPQETLRWPYGSSAQREHCAALLCAPAQESLASAHQRLFIGPHALTAPPWGSVYLDRESVLFGESTLALRH
WMGEQGISWQSDAREPEDHIGILLLMTAWLAEGQPQQLPALLQQHLLPWGGRYLTLLQQGADHPFYQGLASLAALTLQAW
QRQLAIADSDVRLYR

Sequences:

>Translated_175_residues
MAPLVALLRQPQETLRWPYGSSAQREHCAALLCAPAQESLASAHQRLFIGPHALTAPPWGSVYLDRESVLFGESTLALRH
WMGEQGISWQSDAREPEDHIGILLLMTAWLAEGQPQQLPALLQQHLLPWGGRYLTLLQQGADHPFYQGLASLAALTLQAW
QRQLAIADSDVRLYR
>Mature_174_residues
APLVALLRQPQETLRWPYGSSAQREHCAALLCAPAQESLASAHQRLFIGPHALTAPPWGSVYLDRESVLFGESTLALRHW
MGEQGISWQSDAREPEDHIGILLLMTAWLAEGQPQQLPALLQQHLLPWGGRYLTLLQQGADHPFYQGLASLAALTLQAWQ
RQLAIADSDVRLYR

Specific function: Binds to the twin-arginine signal peptide of dmsA and torA. Could be required for the biogenesis of DMSO reductase rather than for the targeting of dmsA to the inner membrane [H]

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein. Cytoplasm (By similarity). Note=Mainly cytoplasmic under aerobic conditions, and found in the inner membrane under anaerobic conditions (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the torD/dmsD family. DmsD subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081942, Length=175, Percent_Identity=50.2857142857143, Blast_Score=155, Evalue=1e-39,
Organism=Escherichia coli, GI1787272, Length=163, Percent_Identity=28.2208588957055, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020945 [H]

Pfam domain/function: PF02613 Nitrate_red_del [H]

EC number: NA

Molecular weight: Translated: 19536; Mature: 19404

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPLVALLRQPQETLRWPYGSSAQREHCAALLCAPAQESLASAHQRLFIGPHALTAPPWG
CCHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHEEECCCCCCCCCCC
SVYLDRESVLFGESTLALRHWMGEQGISWQSDAREPEDHIGILLLMTAWLAEGQPQQLPA
CEEECCCCEEECCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHH
LLQQHLLPWGGRYLTLLQQGADHPFYQGLASLAALTLQAWQRQLAIADSDVRLYR
HHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC
>Mature Secondary Structure 
APLVALLRQPQETLRWPYGSSAQREHCAALLCAPAQESLASAHQRLFIGPHALTAPPWG
CHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHEEECCCCCCCCCCC
SVYLDRESVLFGESTLALRHWMGEQGISWQSDAREPEDHIGILLLMTAWLAEGQPQQLPA
CEEECCCCEEECCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHH
LLQQHLLPWGGRYLTLLQQGADHPFYQGLASLAALTLQAWQRQLAIADSDVRLYR
HHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]