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The map label for this gene is napF [C]

Identifier: 238920362

GI number: 238920362

Start: 2365117

End: 2365689

Strand: Reverse

Name: napF [C]

Synonym: NT01EI_2472

Alternate gene names: 238920362

Gene position: 2365689-2365117 (Counterclockwise)

Preceding gene: 238920363

Following gene: 238920361

Centisome position: 62.05

GC content: 70.68

Gene sequence:

>573_bases
ATGGGCGGCCGTCGCGACGAACGCTACTATCGCGCCTGGATGATGCACCGTCACGTCAGCCGGCGTGGCCTGCTGCGCGG
TCTGCTGGGGGGAGGGCGCCAAGCGCAGCGGCAGGCAGCGCGGATCGCCGAATGCCGGGCCGCGGGGAGGCCGCCTTATG
CGCTGGCGGAGGCGGCCTTCTTGGCCAGCTGCGATGGCTGCGGGGAGTGCGTCGCAGCCTGCCCCTATGGACTCATCGCT
CTGCACGAAGGGCGCGCCTGGCTGGATATCGCCTTTTGCGCCTGCGACACGCAGCGCTGCCGGGCCTGTGTCGACGCCTG
CCCCACAGGGGCGCTGCAGCCGTGGTTCCCCGCGGATACCGCCTGGCGCCCGCAGGTTGGCCCACACTGCCTGGGCCGTT
ACTCTGGGTGTCGCCTGTGTCAGCGGGCCTGCCCCCGGCAGGCGCTGCACTTCGACGACGCGGGACTGCCGCAGCTTGAG
GAGAGCGTCTGCGATGGCTGTGGCCAGTGCAAAATCGCCTGTCACGATGGCCATTTGCAGCTGGTTGCCGCCGTCGCGCG
CGGGAGAGGGTAA

Upstream 100 bases:

>100_bases
ATCCGTTTTATCAGGGGCTGGCGTCGCTGGCGGCGTTGACGCTGCAGGCGTGGCAGCGCCAGCTCGCCATCGCCGACAGC
GATGTACGGCTCTATCGCTG

Downstream 100 bases:

>100_bases
CGCAGTGCCCGTCCGCTGGCTGACCGCTGCTGAGTAATTAACGAGCCATTGACATTTTTGTCACCGGTGGCATGATGCGC
ACACTTTGTCTGTCTGTGCG

Product: NapF protein

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MGGRRDERYYRAWMMHRHVSRRGLLRGLLGGGRQAQRQAARIAECRAAGRPPYALAEAAFLASCDGCGECVAACPYGLIA
LHEGRAWLDIAFCACDTQRCRACVDACPTGALQPWFPADTAWRPQVGPHCLGRYSGCRLCQRACPRQALHFDDAGLPQLE
ESVCDGCGQCKIACHDGHLQLVAAVARGRG

Sequences:

>Translated_190_residues
MGGRRDERYYRAWMMHRHVSRRGLLRGLLGGGRQAQRQAARIAECRAAGRPPYALAEAAFLASCDGCGECVAACPYGLIA
LHEGRAWLDIAFCACDTQRCRACVDACPTGALQPWFPADTAWRPQVGPHCLGRYSGCRLCQRACPRQALHFDDAGLPQLE
ESVCDGCGQCKIACHDGHLQLVAAVARGRG
>Mature_189_residues
GGRRDERYYRAWMMHRHVSRRGLLRGLLGGGRQAQRQAARIAECRAAGRPPYALAEAAFLASCDGCGECVAACPYGLIAL
HEGRAWLDIAFCACDTQRCRACVDACPTGALQPWFPADTAWRPQVGPHCLGRYSGCRLCQRACPRQALHFDDAGLPQLEE
SVCDGCGQCKIACHDGHLQLVAAVARGRG

Specific function: Involved In Electron Transfer. [C]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004496 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 20643; Mature: 20512

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
11.1 %Cys+Met (Translated Protein)
9.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
10.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGRRDERYYRAWMMHRHVSRRGLLRGLLGGGRQAQRQAARIAECRAAGRPPYALAEAAF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LASCDGCGECVAACPYGLIALHEGRAWLDIAFCACDTQRCRACVDACPTGALQPWFPADT
HHCCCCHHHHHHHCCCCEEEEECCCCEEEHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCC
AWRPQVGPHCLGRYSGCRLCQRACPRQALHFDDAGLPQLEESVCDGCGQCKIACHDGHLQ
CCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHCCCCCEEEEEECCHHH
LVAAVARGRG
HHHHHHHCCC
>Mature Secondary Structure 
GGRRDERYYRAWMMHRHVSRRGLLRGLLGGGRQAQRQAARIAECRAAGRPPYALAEAAF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LASCDGCGECVAACPYGLIALHEGRAWLDIAFCACDTQRCRACVDACPTGALQPWFPADT
HHCCCCHHHHHHHCCCCEEEEECCCCEEEHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCC
AWRPQVGPHCLGRYSGCRLCQRACPRQALHFDDAGLPQLEESVCDGCGQCKIACHDGHLQ
CCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHCCCCCEEEEEECCHHH
LVAAVARGRG
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]