| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is trxA [C]
Identifier: 238920357
GI number: 238920357
Start: 2361466
End: 2361843
Strand: Direct
Name: trxA [C]
Synonym: NT01EI_2467
Alternate gene names: 238920357
Gene position: 2361466-2361843 (Clockwise)
Preceding gene: 238920356
Following gene: 238920358
Centisome position: 61.94
GC content: 60.85
Gene sequence:
>378_bases ATGAAAACCCTGAGCACCCTACTGTTTATTCCCGCCCTGCTGCTGTCAGCGGCCGTTCAGGCCGCCAGCGTAGAGCCCTA TAGCGACGCCGCCTTTACCCAGGCACAGGCCAGCGGCGCGCCGGTGCTGATTGACGTCTACGCCGACTGGTGTCCGGTTT GCAAACGACAGGAGCGTGAACTCACGCCATTGTTTGCCCAGCCGACACAGCGCGATCTGCGCGTCTTTAAGGTCAACTTC GATACCCAAAAGACGGCGCTGCAGCAGTTTCGCGTCAGCCAGCAAAGCACCCTGATCCTCTATCGTCACGGTCAGGAGAT CCGCCGCAGCATTGGCGAAACGTCGCCCAGCGCGCTCTCAGAGTTTCTGGGCCGCTGA
Upstream 100 bases:
>100_bases TTTTCCTGTTTAAGGATCTGGCATTCCTGGGCATCAGCCTGAGTATTGCCGAGCGCAGCCGTGCGGCGATGCAGACCCCG ACGACCGCGGAGGTAGCATA
Downstream 100 bases:
>100_bases GGACATCCCATGGAGATAAGCCTGCTGACACTGGGATTCAGCCTGCTGGCCGGCATGCTGACGACCCTCTCCCCCTGCGT CCTGCCGATCCTGCCTATCG
Product: Trx
Products: NA
Alternate protein names: Thioredoxin Domain Protein; Thioredoxin-Related; Thioredoxin; Thioredoxin Domain
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MKTLSTLLFIPALLLSAAVQAASVEPYSDAAFTQAQASGAPVLIDVYADWCPVCKRQERELTPLFAQPTQRDLRVFKVNF DTQKTALQQFRVSQQSTLILYRHGQEIRRSIGETSPSALSEFLGR
Sequences:
>Translated_125_residues MKTLSTLLFIPALLLSAAVQAASVEPYSDAAFTQAQASGAPVLIDVYADWCPVCKRQERELTPLFAQPTQRDLRVFKVNF DTQKTALQQFRVSQQSTLILYRHGQEIRRSIGETSPSALSEFLGR >Mature_125_residues MKTLSTLLFIPALLLSAAVQAASVEPYSDAAFTQAQASGAPVLIDVYADWCPVCKRQERELTPLFAQPTQRDLRVFKVNF DTQKTALQQFRVSQQSTLILYRHGQEIRRSIGETSPSALSEFLGR
Specific function: Participates In Various Redox Reactions Through The Reversible Oxidation Of Its Active Center Dithiol To A Disulfide And Catalyzes Dithiol-Disulfide Exchange Reactions. [C]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13946; Mature: 13946
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLSTLLFIPALLLSAAVQAASVEPYSDAAFTQAQASGAPVLIDVYADWCPVCKRQERE CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCC LTPLFAQPTQRDLRVFKVNFDTQKTALQQFRVSQQSTLILYRHGQEIRRSIGETSPSALS CCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCCCHHHHH EFLGR HHHCC >Mature Secondary Structure MKTLSTLLFIPALLLSAAVQAASVEPYSDAAFTQAQASGAPVLIDVYADWCPVCKRQERE CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHCCCCC LTPLFAQPTQRDLRVFKVNFDTQKTALQQFRVSQQSTLILYRHGQEIRRSIGETSPSALS CCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCCCHHHHH EFLGR HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA