| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is ykgB [C]
Identifier: 238920356
GI number: 238920356
Start: 2361002
End: 2361466
Strand: Direct
Name: ykgB [C]
Synonym: NT01EI_2466
Alternate gene names: 238920356
Gene position: 2361002-2361466 (Clockwise)
Preceding gene: 238920354
Following gene: 238920357
Centisome position: 61.93
GC content: 56.56
Gene sequence:
>465_bases ATGAATTCATGCAAATCCAGCGGACGGCGCGGCTATCTGATCGGCCTGTGGGCAACGGCACTGATCCTGATTTGGCTCGG CATCTTCAAATTTACACCAACCGAAGCCGATGCAATCAAGCCACTGGTAGAACACCATTTTCTGATGGGCTGGCTGTATG GCGTATTCAGCGTCCAGACCGTCTCCAACCTGATCGGTCTGAGCGAAATCGTGGTGGGCGTCGCGCTGCTGATCGGTATC ACGCGACCGCACATCGGCTTCTGTGCCGGGATTGCCGCCAGCGTAATTTTCCTGGTCACCCTGAGCTTCATGTTTACCAC TCCGGGCGTATTCAAGGTGGTCGACGGAGTGCCGGTAACCGAGTTTTTCCTGTTTAAGGATCTGGCATTCCTGGGCATCA GCCTGAGTATTGCCGAGCGCAGCCGTGCGGCGATGCAGACCCCGACGACCGCGGAGGTAGCATAA
Upstream 100 bases:
>100_bases CTGCGTATCGATTTTTGTATCGATGAATACAAAAACACTTGACTCAACTTTCCAATACCACAATATTATATTGTATCGAA CATTACAAAAAGGTGGAATT
Downstream 100 bases:
>100_bases TGAAAACCCTGAGCACCCTACTGTTTATTCCCGCCCTGCTGCTGTCAGCGGCCGTTCAGGCCGCCAGCGTAGAGCCCTAT AGCGACGCCGCCTTTACCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MNSCKSSGRRGYLIGLWATALILIWLGIFKFTPTEADAIKPLVEHHFLMGWLYGVFSVQTVSNLIGLSEIVVGVALLIGI TRPHIGFCAGIAASVIFLVTLSFMFTTPGVFKVVDGVPVTEFFLFKDLAFLGISLSIAERSRAAMQTPTTAEVA
Sequences:
>Translated_154_residues MNSCKSSGRRGYLIGLWATALILIWLGIFKFTPTEADAIKPLVEHHFLMGWLYGVFSVQTVSNLIGLSEIVVGVALLIGI TRPHIGFCAGIAASVIFLVTLSFMFTTPGVFKVVDGVPVTEFFLFKDLAFLGISLSIAERSRAAMQTPTTAEVA >Mature_154_residues MNSCKSSGRRGYLIGLWATALILIWLGIFKFTPTEADAIKPLVEHHFLMGWLYGVFSVQTVSNLIGLSEIVVGVALLIGI TRPHIGFCAGIAASVIFLVTLSFMFTTPGVFKVVDGVPVTEFFLFKDLAFLGISLSIAERSRAAMQTPTTAEVA
Specific function: Unknown
COG id: COG3059
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16641; Mature: 16641
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSCKSSGRRGYLIGLWATALILIWLGIFKFTPTEADAIKPLVEHHFLMGWLYGVFSVQT CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VSNLIGLSEIVVGVALLIGITRPHIGFCAGIAASVIFLVTLSFMFTTPGVFKVVDGVPVT HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHH EFFLFKDLAFLGISLSIAERSRAAMQTPTTAEVA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNSCKSSGRRGYLIGLWATALILIWLGIFKFTPTEADAIKPLVEHHFLMGWLYGVFSVQT CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VSNLIGLSEIVVGVALLIGITRPHIGFCAGIAASVIFLVTLSFMFTTPGVFKVVDGVPVT HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHH EFFLFKDLAFLGISLSIAERSRAAMQTPTTAEVA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA