| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is mopB [H]
Identifier: 238920320
GI number: 238920320
Start: 2319374
End: 2319769
Strand: Direct
Name: mopB [H]
Synonym: NT01EI_2430
Alternate gene names: 238920320
Gene position: 2319374-2319769 (Clockwise)
Preceding gene: 238920319
Following gene: 238920321
Centisome position: 60.84
GC content: 62.88
Gene sequence:
>396_bases ATGTCAAGCGTCGTCGCGGCGATCCCCGCCCCCCCCGCTCTGCCAACAGAAAGCGTGCTAACCCAGGTGGGCGGTACGCT GGGCGGCATTCTGCTGCTGATCCTGGCGCTGGCCTGGCTGGTCAAGCGTCTGGGATTCGCCGCCCGTCCACGCGGTGAGC GACTGCTCAACGTCCGCGCCAGCTGCAGCCTGGGACAGCGTGAGCGGCTGGTGGTGGTCGAAGTGGACAACCAGTGTCTG GTGCTTGGCGTCACGGCCCAGAGCATTACACATCTACATACCTTTGATGTGCCAGCAACAGCAGAACATGATGCGGCCGG GCAACCGACCTCATTTCAGCACCTGCTACGCCAGGCTGCACGTCACCGGTTTGGCCGAAGTAAAGAGAACTCCTGA
Upstream 100 bases:
>100_bases ATAGCCCAGGGTGAGGTGGTGGTGGTCAACGATAAATTCGGCGTCCGCATTACCGATATTATCACCCCGTCAGAACGCAT GCGTCGTCTGAGCCGCTGAT
Downstream 100 bases:
>100_bases TGCGGCGTATTCTGCGTTACACCCTGCTGTCGGGGCTGCTGCTGTGTGCGCCGGCGGCGCTGGCCCAGCTGCCCGGCATT ATCAGCCAACCGCTGGCGCA
Product: flagellar biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MSSVVAAIPAPPALPTESVLTQVGGTLGGILLLILALAWLVKRLGFAARPRGERLLNVRASCSLGQRERLVVVEVDNQCL VLGVTAQSITHLHTFDVPATAEHDAAGQPTSFQHLLRQAARHRFGRSKENS
Sequences:
>Translated_131_residues MSSVVAAIPAPPALPTESVLTQVGGTLGGILLLILALAWLVKRLGFAARPRGERLLNVRASCSLGQRERLVVVEVDNQCL VLGVTAQSITHLHTFDVPATAEHDAAGQPTSFQHLLRQAARHRFGRSKENS >Mature_130_residues SSVVAAIPAPPALPTESVLTQVGGTLGGILLLILALAWLVKRLGFAARPRGERLLNVRASCSLGQRERLVVVEVDNQCLV LGVTAQSITHLHTFDVPATAEHDAAGQPTSFQHLLRQAARHRFGRSKENS
Specific function: Required for both, motility and virulence [H]
COG id: COG3190
COG function: function code N; Flagellar biogenesis protein
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein. Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fliO/mopB family [H]
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022781 [H]
Pfam domain/function: PF04347 FliO [H]
EC number: NA
Molecular weight: Translated: 14021; Mature: 13890
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVVAAIPAPPALPTESVLTQVGGTLGGILLLILALAWLVKRLGFAARPRGERLLNVRA CCCCEECCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEHHC SCSLGQRERLVVVEVDNQCLVLGVTAQSITHLHTFDVPATAEHDAAGQPTSFQHLLRQAA CCCCCCCCCEEEEEECCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH RHRFGRSKENS HHHCCCCCCCC >Mature Secondary Structure SSVVAAIPAPPALPTESVLTQVGGTLGGILLLILALAWLVKRLGFAARPRGERLLNVRA CCCEECCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEHHC SCSLGQRERLVVVEVDNQCLVLGVTAQSITHLHTFDVPATAEHDAAGQPTSFQHLLRQAA CCCCCCCCCEEEEEECCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH RHRFGRSKENS HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8412685 [H]