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The map label for this gene is fliP [H]

Identifier: 238920321

GI number: 238920321

Start: 2319769

End: 2320509

Strand: Direct

Name: fliP [H]

Synonym: NT01EI_2431

Alternate gene names: 238920321

Gene position: 2319769-2320509 (Clockwise)

Preceding gene: 238920320

Following gene: 238920322

Centisome position: 60.85

GC content: 59.38

Gene sequence:

>741_bases
ATGCGGCGTATTCTGCGTTACACCCTGCTGTCGGGGCTGCTGCTGTGTGCGCCGGCGGCGCTGGCCCAGCTGCCCGGCAT
TATCAGCCAACCGCTGGCGCACGGCGGGCAGAGCTGGTCCCTGCCGGTCCAGACGTTGGTTTTCCTGACCTCGCTCAGCT
TCCTGCCGGCCGCGCTGCTGCTGATGACCAGCTTTACCCGGATCATCATCGTTCTCGGCCTGCTGCGCAACGCGCTGGGT
ACCCCCTCTGCGCCACCGAACCAGGTGCTGCTGGGACTCGCGCTGTTCTTAACCTTTTTTATCATGTCGCCGGTGCTCGA
TAAGATCTACCAGGAAGCCTATCAGCCATTCAGCGAACAGAAAATCAGCATGGAGACCGCTCTGGATCGCGGCGCCAAAC
CGCTGCGGGCCTTTATGCTGCGTCAAACCCGTGAAACCGATCTGGCGCTGTTCTCCCGCCTGGCGAAACAGCCAGAGATG
CAGGGGCCGGAAGATGTACCGATGCGGATTCTGCTGCCAGCCTACGTCACCAGCGAGCTGAAAACAGCATTCCAGATCGG
CTTTACCGTCTTTATTCCATTTTTGATCATCGACCTGGTCGTCGCCAGCGTATTGATGGCGCTGGGGATGATGATGGTAC
CGCCGGCCACCATCTCACTACCGTTTAAACTGATGCTGTTTGTTCTGGTGGACGGCTGGCAACTGCTGCTCGGCTCGCTG
GCGCAAAGTTTCTACACCTAA

Upstream 100 bases:

>100_bases
CAACAGCAGAACATGATGCGGCCGGGCAACCGACCTCATTTCAGCACCTGCTACGCCAGGCTGCACGTCACCGGTTTGGC
CGAAGTAAAGAGAACTCCTG

Downstream 100 bases:

>100_bases
CGCCCCATCGCATTAGACGATTTATCCGTCGCCCTGCCCCGATAGGCATCCTGCGTACACCGTATCGATCGCGGTATCGC
CGTCCACATCGGGGTCGCGC

Product: flagellar biosynthetic protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MRRILRYTLLSGLLLCAPAALAQLPGIISQPLAHGGQSWSLPVQTLVFLTSLSFLPAALLLMTSFTRIIIVLGLLRNALG
TPSAPPNQVLLGLALFLTFFIMSPVLDKIYQEAYQPFSEQKISMETALDRGAKPLRAFMLRQTRETDLALFSRLAKQPEM
QGPEDVPMRILLPAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWQLLLGSL
AQSFYT

Sequences:

>Translated_246_residues
MRRILRYTLLSGLLLCAPAALAQLPGIISQPLAHGGQSWSLPVQTLVFLTSLSFLPAALLLMTSFTRIIIVLGLLRNALG
TPSAPPNQVLLGLALFLTFFIMSPVLDKIYQEAYQPFSEQKISMETALDRGAKPLRAFMLRQTRETDLALFSRLAKQPEM
QGPEDVPMRILLPAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWQLLLGSL
AQSFYT
>Mature_246_residues
MRRILRYTLLSGLLLCAPAALAQLPGIISQPLAHGGQSWSLPVQTLVFLTSLSFLPAALLLMTSFTRIIIVLGLLRNALG
TPSAPPNQVLLGLALFLTFFIMSPVLDKIYQEAYQPFSEQKISMETALDRGAKPLRAFMLRQTRETDLALFSRLAKQPEM
QGPEDVPMRILLPAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPATISLPFKLMLFVLVDGWQLLLGSL
AQSFYT

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=246, Percent_Identity=81.3008130081301, Blast_Score=390, Evalue=1e-110,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 27144; Mature: 27144

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCC
>Mature Secondary Structure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HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]