| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920298
Identifier: 238920298
GI number: 238920298
Start: 2303492
End: 2303815
Strand: Reverse
Name: 238920298
Synonym: NT01EI_2408
Alternate gene names: NA
Gene position: 2303815-2303492 (Counterclockwise)
Preceding gene: 238920300
Following gene: 238920297
Centisome position: 60.43
GC content: 58.33
Gene sequence:
>324_bases GTGCAGGCGTTCCTGCAGCGGCCGCGGGAAGGGGAGTGGCCCTACCTGTGGCTGAATGCGACCTACGTGAAGGTGCGCAA GAACGGGAGGGTGGTCAGCGTGGTGGTAATAATCGCCTGCGCGGTCAGCCCGGACGGTCGCCGGGAGATTATCGGGATGG GTATCGGTGAGTCAGAAGCCAAAACGTTCTGGCTGGCCTTCCATTCTATTATTCCATTCCTGCGTTTCTGTCCCTGTATT GCTTCTCGGCTTGTGTCCCATGGTTCACTAACAGTGATGGGGGGCCACGCCGGCATTTCATACCGGTCATCCGTCAGACC TTAA
Upstream 100 bases:
>100_bases GTCTCGACCCGCAAGGTTGACGCGACTGGTCCAGCCGATGGGGATGAGCGGTATCTCCCGAAGCTAGGTGTCATCCCTCT GCCGCGGCATCGACGAGCGT
Downstream 100 bases:
>100_bases AGGTCTTAAAGGCGGCGGGGATATGTCATTATCAGGAAATGTGCCAAAAACGCTAAAGCTTTTAACGCAGGTGCCGATAG TAGATGAGTATCAGTCATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MQAFLQRPREGEWPYLWLNATYVKVRKNGRVVSVVVIIACAVSPDGRREIIGMGIGESEAKTFWLAFHSIIPFLRFCPCI ASRLVSHGSLTVMGGHAGISYRSSVRP
Sequences:
>Translated_107_residues MQAFLQRPREGEWPYLWLNATYVKVRKNGRVVSVVVIIACAVSPDGRREIIGMGIGESEAKTFWLAFHSIIPFLRFCPCI ASRLVSHGSLTVMGGHAGISYRSSVRP >Mature_107_residues MQAFLQRPREGEWPYLWLNATYVKVRKNGRVVSVVVIIACAVSPDGRREIIGMGIGESEAKTFWLAFHSIIPFLRFCPCI ASRLVSHGSLTVMGGHAGISYRSSVRP
Specific function: Unknown
COG id: COG3328
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11905; Mature: 11905
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAFLQRPREGEWPYLWLNATYVKVRKNGRVVSVVVIIACAVSPDGRREIIGMGIGESEA CCHHHCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEHCCCCCCCCEEEEEECCCCCHH KTFWLAFHSIIPFLRFCPCIASRLVSHGSLTVMGGHAGISYRSSVRP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure MQAFLQRPREGEWPYLWLNATYVKVRKNGRVVSVVVIIACAVSPDGRREIIGMGIGESEA CCHHHCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEHCCCCCCCCEEEEEECCCCCHH KTFWLAFHSIIPFLRFCPCIASRLVSHGSLTVMGGHAGISYRSSVRP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA