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The map label for this gene is fliC [H]

Identifier: 238920300

GI number: 238920300

Start: 2304499

End: 2305560

Strand: Reverse

Name: fliC [H]

Synonym: NT01EI_2410

Alternate gene names: 238920300

Gene position: 2305560-2304499 (Counterclockwise)

Preceding gene: 238920301

Following gene: 238920298

Centisome position: 60.48

GC content: 56.03

Gene sequence:

>1062_bases
ATGGCACTAGTTATTAACACCAATATTCTGTCCCTGGAAGCACAGAACAATCTGAACAAATCCCAGTCAGCTCTGGGCAC
CGCCATTGAGCGTCTCTCTTCCGGCCTGCGTATCAACAGCGCCAAGGATGATGCTGCCGGTCAGGCCATCGCCAACCGTT
TTACTGCCAACATCAACGGCCTGACCCAGGCCTCCCGCAACGCCAACGACGGTATCTCTCTGGCACAGACCACTGAAGGC
GCCCTGAACGAAGTCAACGATAACCTGCAGAACATCCGTCGTCTGACCGTTCAGGCGCAGAACGGCACCAACTCTGAGAG
CGACCTGCAGTCCATCCAGGATGAAATCACCCAGCGTCTGGATGAAATCAACCGTATCTCTGCCCAGACCGACTTTAACG
GTGTCAAGGTCCTGAGCAAGGATCAGAGCCTGACTATTCAGGTTGGTGCTGACGATGGCCAGACCATCGGGATCAATCTG
CGCAATATGGATGTGGGCACTCTGGGGCTGAACTCCTTTAGCGTAATGACCAAGGGCACCCGTGTGGGTGATACCGTTTC
TGTTGGTACCATGGTTACCCCGACAGCGGGCGGCAAAATGGTTGCCGTTCAGGCAGTGCCTACGGCTGCTAAAGGGTCAA
CGGCTTCCCTGGTTTCCGGAACAAGTGCCGCGGGGCAGGCCGGTTACTATATTAAAACCGTTAACGATTCAACGGGTGTG
GCAACTTACACCACAGCGACCATTGATGATAAAGGCGTTGTAACTGCAGGCACTAAAGTGACTGACCTGCAGACCCCGCT
GGCAACCCTGGATAAAGCGCTGTCTCAGGTTGATGACCTGCGCAGCGGCCTGGGTGCGGTACAGAACCGTTTCGACTCCG
TTATCAGTAACCTGGACAGCACCGTCACCAACCTGACTGCTTCCCGCTCCCGTATTCAGGATGCTGACTACGCGACCGAG
GTTTCTGACATGAGCCGTGCGCAGATCCTGCAGCAGGCCGGTACCGCGGTACTGGCCAAGGCCAACCAGTCCACCCAGAA
TGTACTGACCCTGCTGCGCTGA

Upstream 100 bases:

>100_bases
AGTGTGCCAGATACGTTAAAGTTTTTACGGTAGGTGTCGATAGTAAAAGAGGTATCAGTTAGATGTTATATGATGTTATA
TCCAGTTGAGGATTTTTATC

Downstream 100 bases:

>100_bases
TGGGCAGCAGCCTGCCTAGAGCAGGTGCAGCACCGCGCGATATCGCAGCCACCTCCGGGTAAGTGCCATTCACTTAAGCG
TGTATGGGGTGAATGGGATA

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MALVINTNILSLEAQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANINGLTQASRNANDGISLAQTTEG
ALNEVNDNLQNIRRLTVQAQNGTNSESDLQSIQDEITQRLDEINRISAQTDFNGVKVLSKDQSLTIQVGADDGQTIGINL
RNMDVGTLGLNSFSVMTKGTRVGDTVSVGTMVTPTAGGKMVAVQAVPTAAKGSTASLVSGTSAAGQAGYYIKTVNDSTGV
ATYTTATIDDKGVVTAGTKVTDLQTPLATLDKALSQVDDLRSGLGAVQNRFDSVISNLDSTVTNLTASRSRIQDADYATE
VSDMSRAQILQQAGTAVLAKANQSTQNVLTLLR

Sequences:

>Translated_353_residues
MALVINTNILSLEAQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANINGLTQASRNANDGISLAQTTEG
ALNEVNDNLQNIRRLTVQAQNGTNSESDLQSIQDEITQRLDEINRISAQTDFNGVKVLSKDQSLTIQVGADDGQTIGINL
RNMDVGTLGLNSFSVMTKGTRVGDTVSVGTMVTPTAGGKMVAVQAVPTAAKGSTASLVSGTSAAGQAGYYIKTVNDSTGV
ATYTTATIDDKGVVTAGTKVTDLQTPLATLDKALSQVDDLRSGLGAVQNRFDSVISNLDSTVTNLTASRSRIQDADYATE
VSDMSRAQILQQAGTAVLAKANQSTQNVLTLLR
>Mature_352_residues
ALVINTNILSLEAQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANINGLTQASRNANDGISLAQTTEGA
LNEVNDNLQNIRRLTVQAQNGTNSESDLQSIQDEITQRLDEINRISAQTDFNGVKVLSKDQSLTIQVGADDGQTIGINLR
NMDVGTLGLNSFSVMTKGTRVGDTVSVGTMVTPTAGGKMVAVQAVPTAAKGSTASLVSGTSAAGQAGYYIKTVNDSTGVA
TYTTATIDDKGVVTAGTKVTDLQTPLATLDKALSQVDDLRSGLGAVQNRFDSVISNLDSTVTNLTASRSRIQDADYATEV
SDMSRAQILQQAGTAVLAKANQSTQNVLTLLR

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=282, Percent_Identity=55.3191489361702, Blast_Score=257, Evalue=6e-70,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 36856; Mature: 36725

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALVINTNILSLEAQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANING
CEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCCC
LTQASRNANDGISLAQTTEGALNEVNDNLQNIRRLTVQAQNGTNSESDLQSIQDEITQRL
HHHCCCCCCCCCEEEHHCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHH
DEINRISAQTDFNGVKVLSKDQSLTIQVGADDGQTIGINLRNMDVGTLGLNSFSVMTKGT
HHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCCEEEEEEEECEEEEECCCCEEEEECCC
RVGDTVSVGTMVTPTAGGKMVAVQAVPTAAKGSTASLVSGTSAAGQAGYYIKTVNDSTGV
CCCCEEEECEEEECCCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCCEEEEEECCCCCE
ATYTTATIDDKGVVTAGTKVTDLQTPLATLDKALSQVDDLRSGLGAVQNRFDSVISNLDS
EEEEEEEECCCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVTNLTASRSRIQDADYATEVSDMSRAQILQQAGTAVLAKANQSTQNVLTLLR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCC
>Mature Secondary Structure 
ALVINTNILSLEAQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANING
EEEEECCEEEEECCCCCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCCC
LTQASRNANDGISLAQTTEGALNEVNDNLQNIRRLTVQAQNGTNSESDLQSIQDEITQRL
HHHCCCCCCCCCEEEHHCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHH
DEINRISAQTDFNGVKVLSKDQSLTIQVGADDGQTIGINLRNMDVGTLGLNSFSVMTKGT
HHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCCEEEEEEEECEEEEECCCCEEEEECCC
RVGDTVSVGTMVTPTAGGKMVAVQAVPTAAKGSTASLVSGTSAAGQAGYYIKTVNDSTGV
CCCCEEEECEEEECCCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCCEEEEEECCCCCE
ATYTTATIDDKGVVTAGTKVTDLQTPLATLDKALSQVDDLRSGLGAVQNRFDSVISNLDS
EEEEEEEECCCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVTNLTASRSRIQDADYATEVSDMSRAQILQQAGTAVLAKANQSTQNVLTLLR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2673930 [H]