| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920247
Identifier: 238920247
GI number: 238920247
Start: 2259854
End: 2260012
Strand: Reverse
Name: 238920247
Synonym: NT01EI_2356
Alternate gene names: NA
Gene position: 2260012-2259854 (Counterclockwise)
Preceding gene: 238920249
Following gene: 238920246
Centisome position: 59.28
GC content: 52.2
Gene sequence:
>159_bases TTGGGTCGTTATCGCTGGGTTGTAGAGCGAACTCATGGTTGGTTAGCGGGTTTTGGCAAGCTGCGTATTCGCTTCGAACG GCGGCTGGATACCCATCTTGCATTGCTGACGCTGGCTTGTGCTGCTATCTGCTTGCGCTTTGTTGAACGGTTTTGTTAG
Upstream 100 bases:
>100_bases CGCAGACAAGGGGTATGATTTTCGCCGTTGCCGGGATTATCTGAGGCGACGGGGAATCAAGGCCCGTATTGCCCGGCGAG GCGTTGATAGCCATGACCGA
Downstream 100 bases:
>100_bases CGGCTCTAAATAGCAGCAGGTTCAGAGGAGTAACTATCCCGCTGCGCTCTCAGCATTCTGACTGCCCGCTCACCGGGTTC GGGGGGGTAACGCCGGGATG
Product: transposase for insertion sequence element
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 52; Mature: 51
Protein sequence:
>52_residues MGRYRWVVERTHGWLAGFGKLRIRFERRLDTHLALLTLACAAICLRFVERFC
Sequences:
>Translated_52_residues MGRYRWVVERTHGWLAGFGKLRIRFERRLDTHLALLTLACAAICLRFVERFC >Mature_51_residues GRYRWVVERTHGWLAGFGKLRIRFERRLDTHLALLTLACAAICLRFVERFC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6210; Mature: 6078
Theoretical pI: Translated: 11.16; Mature: 11.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 5.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRYRWVVERTHGWLAGFGKLRIRFERRLDTHLALLTLACAAICLRFVERFC CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure GRYRWVVERTHGWLAGFGKLRIRFERRLDTHLALLTLACAAICLRFVERFC CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA