Click here to switch to the map view.

The map label for this gene is yciH [H]

Identifier: 238920239

GI number: 238920239

Start: 2243688

End: 2244014

Strand: Reverse

Name: yciH [H]

Synonym: NT01EI_2348

Alternate gene names: 238920239

Gene position: 2244014-2243688 (Counterclockwise)

Preceding gene: 238920240

Following gene: 238920235

Centisome position: 58.86

GC content: 61.16

Gene sequence:

>327_bases
ATGCAAGAGAGTAACAGTCGGCTGGTCTACACCACCGACGCTGGGCGAGTCCACGAAACGGCGGCCGTAGCGTCACGTCC
AAAGGGGGATGGCACGGTACGAATTCAGCGTCAGACCAGCGGACGTAAAGGCAAAGGGGTATGCGTGATCACCGGTCTGG
ATCTGGACGATGCGGCAACATTGGCGCTGGCGGCCGAGCTGAAGAAACGCTGTGGCTGCGGCGGCAGCGCGCGTGACGGC
GTCATTGAGATCCAGGGGGATAAGCGCGATTTGATTAAGCAGCTGCTGGAGGCGAAAGGGATGCGGGTCAAGCTATCCGG
GGGCTGA

Upstream 100 bases:

>100_bases
ATGGTGATCGGGCGTCCAATCACCCAGGCGGCGCAGCCGGCCGAGGCGCTGCGCGCCATTCTGGCGACGCTGGCCTAAAT
CGAGACGGGAGTGGGTAAAA

Downstream 100 bases:

>100_bases
ACGTGCGCTCATCCTGACAAAAAAGCCGGCGTACGCCGGCTTTTTTACCGGCCGGAGAGGGATTACCTGCCTATCTGATG
GCCGATAAGGCCACCGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MQESNSRLVYTTDAGRVHETAAVASRPKGDGTVRIQRQTSGRKGKGVCVITGLDLDDAATLALAAELKKRCGCGGSARDG
VIEIQGDKRDLIKQLLEAKGMRVKLSGG

Sequences:

>Translated_108_residues
MQESNSRLVYTTDAGRVHETAAVASRPKGDGTVRIQRQTSGRKGKGVCVITGLDLDDAATLALAAELKKRCGCGGSARDG
VIEIQGDKRDLIKQLLEAKGMRVKLSGG
>Mature_108_residues
MQESNSRLVYTTDAGRVHETAAVASRPKGDGTVRIQRQTSGRKGKGVCVITGLDLDDAATLALAAELKKRCGCGGSARDG
VIEIQGDKRDLIKQLLEAKGMRVKLSGG

Specific function: Unknown

COG id: COG0023

COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SUI1 family [H]

Homologues:

Organism=Escherichia coli, GI87081867, Length=108, Percent_Identity=75, Blast_Score=167, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005872
- InterPro:   IPR001950 [H]

Pfam domain/function: PF01253 SUI1 [H]

EC number: NA

Molecular weight: Translated: 11382; Mature: 11382

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS50296 SUI1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQESNSRLVYTTDAGRVHETAAVASRPKGDGTVRIQRQTSGRKGKGVCVITGLDLDDAAT
CCCCCCCEEEEECCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCHHH
LALAAELKKRCGCGGSARDGVIEIQGDKRDLIKQLLEAKGMRVKLSGG
HHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCEEEECCC
>Mature Secondary Structure
MQESNSRLVYTTDAGRVHETAAVASRPKGDGTVRIQRQTSGRKGKGVCVITGLDLDDAAT
CCCCCCCEEEEECCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCHHH
LALAAELKKRCGCGGSARDGVIEIQGDKRDLIKQLLEAKGMRVKLSGG
HHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2956254; 9097039; 9278503; 10497266 [H]