| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920149
Identifier: 238920149
GI number: 238920149
Start: 2163503
End: 2165308
Strand: Reverse
Name: 238920149
Synonym: NT01EI_2255
Alternate gene names: NA
Gene position: 2165308-2163503 (Counterclockwise)
Preceding gene: 238920171
Following gene: 238920148
Centisome position: 56.8
GC content: 55.98
Gene sequence:
>1806_bases ATGGCCTATTCTGAAGAAGTGATCGCTGCGGCTAAGGCGCTCTACTTAAAGCGGCACACGCCAAAGGAAATACAGCGCAA ATTAAAGCTAAGCAGCCCGCGAGTGGTGTATTACTGGGCGACCAAATATGAATGGTATGCACAGCTCAGTACCGATTGCA TCGAGGATGCCATCGCCCAGCGCCTGACCCTGCTTGCTGCCCGCGAGCATAAGAGCGACGTGGAATGTGACGAGCTGGAT CGGCTTATTGGCCATCACGTTAAGTTGATGGCGCAGAAGAATAAGCATGCGGAGCGGATGGCCGAGATTGCACAGCGGCG TGCTACCGGGGCTGACTATGTCGCTGCTACGGGGGAGGCTGAGGCGGCCGAGGGGGAAGGGAGGCGCAAGGGACGGCGTA AACAGAATGATATTTCTGAGTTGACCGCCGAGAGCTTCACGCCGTTTCTGGATAACCTGTTCAAGTATCAGCTGCATCTG CGTGACAATAAATTTCGCCGCGTGCGTAATTTGCTCAAGGCGCGCCAGATTGGCGCCACCTACTATTTTGCCTTTGAGGC ATTCGAAGATGCGGTGCTGACGGGGGATAACCAAATCTTCCTGTCGGCCTCCCGGCGCCAGGCCGAAGTCTTTCGCACCT ATATCCTGAAAATCGCACAGGTTGAATTCGGCATTCAGTTAAAAGGGAATCCGATCAGGCTGAGCAATATGGCCGAGCTG CATTTTCTGGCCACCAACTCCAATACGGCACAGTCGAACTCCGGCCATTTGTATATCGATGAGTATCTGTGGATCTCGAA ATTTACCACCTTTAATGAGGTGGCCTCCGGGATGGCGACCCAGAGCCATTGGCGCTTGACCTATTTCTCCACTCCCTCCG CCAAAAACCACCAGGGCTATGCGTTTTGGAGCGGTGACGAATGGCGGCGTGGCAACGCCGAGCGCAAGAGCGTGGTGTTC CCGGCATTCGACGAACTGCGTGACGGTGGCCGTGAATGCCCGGATAAGCAGTGGCGCTACGTGGTGACGATGGAGGATGC CATCGCCGACGGATTTAACCGGGCAGATATTGAGGAGCTGCGCGAGCGTTACGGCGAAAACGCCTTTAACCGGCTGTATA TGTGCGTTTTTGTGGATGACAAAGACAGCGTATTCGACTTCGCCAAACTGGTGCGGTGTGGCGTTGATCCGCATATCTGG CAGGACTTTCATCCCGACGAGGCGGCGCCGCTGGGTAATCGTGAGGTGTGGGGCGGGTTTGACCCGGCGCGCAGCGGAGA TAATGCGACCTTTGTCGTCATCGCCGTCCCATTGCTGGCGGTGGAGCGGTTCCGGGTGCTGGAAAAGCACCACTGGCGCG GCCTGTCATTCCAGTGGATGGCCGACCAGATTCGGACGATCAAATCGCGCTACAACATGACCCATATCGGCATCGATGTG ACCGGCATCGGCTATGGCGTCTATGAACTGGTGCAGGGGTTTGCACGGCGTGAGGCCAAGGCCATTCACTACAGCGTCGA GTCAAAAAATCGCCTGGTGCTGAAAATGCTGGATGTCATCGACAGCAATCGTATCGAGTGGGATGAAGACGCCAGAGATA TCCCCGCGTCGTTCCTGGCGATAAAGCAGAGCGCGACCGCCTCCGGCAATGCGGTGACCTTTACCGCCGACCGTACCGAT GAAACCGGACACGCCGATATCTTCTTTGCCATCGCTCACGCCCTGGCCAATGAGCCCATCGGCTATAGGAACAAACGCAG GTCAACCTGGATTTTTGGTGATGAAGAAAACAAAAACGCCGCCTAA
Upstream 100 bases:
>100_bases GGCTATGGCGGGGTATCCGAAACTATCCGCTTTCCCGCTCTCGCCGCCGCGTGGGTTCCCACAGAGAATTGACGGAACAC AATCAACGCGGTGATAGGTA
Downstream 100 bases:
>100_bases GGCGCGCGGCGGCAAGCTGGGACAGCGCGCTATGCGGCACCGTTCGCCGGGGAGCTTTATCGAGTTTGGCGATCCCGAGC CGGTCGCGGCCTGGGGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Terminase ATPase Subunit; Terminase; Phage-Related Terminase ATPase Subunit; Terminase Related Protein; Bacteriophage Terminase; Orf16-Like Phage Protein; Phage Terminase ATPase Subunit P; Mu-Like Prophage FluMu Protein Gp; Prophage; ATPase Subunit Of Terminase; Phage Gene; Terminase Subunit; Phage P2 Terminase ATPase Subunit GpP-Like Protein; Bacteriophage Terminase Large Subunit; Prophage Large Terminase Protein; Fels-2 Prophage Protein; Phage Terminase Subunit GpP; Terminase Large Subunit; DNA-Dependent ATPase Terminase Subunit; Terminase ATPase Subunit Bacteriophage Origin; Bacteriophage P2 GPP Capsid Protein; Phage Terminase Subunit; Phage-Related Terminase
Number of amino acids: Translated: 601; Mature: 600
Protein sequence:
>601_residues MAYSEEVIAAAKALYLKRHTPKEIQRKLKLSSPRVVYYWATKYEWYAQLSTDCIEDAIAQRLTLLAAREHKSDVECDELD RLIGHHVKLMAQKNKHAERMAEIAQRRATGADYVAATGEAEAAEGEGRRKGRRKQNDISELTAESFTPFLDNLFKYQLHL RDNKFRRVRNLLKARQIGATYYFAFEAFEDAVLTGDNQIFLSASRRQAEVFRTYILKIAQVEFGIQLKGNPIRLSNMAEL HFLATNSNTAQSNSGHLYIDEYLWISKFTTFNEVASGMATQSHWRLTYFSTPSAKNHQGYAFWSGDEWRRGNAERKSVVF PAFDELRDGGRECPDKQWRYVVTMEDAIADGFNRADIEELRERYGENAFNRLYMCVFVDDKDSVFDFAKLVRCGVDPHIW QDFHPDEAAPLGNREVWGGFDPARSGDNATFVVIAVPLLAVERFRVLEKHHWRGLSFQWMADQIRTIKSRYNMTHIGIDV TGIGYGVYELVQGFARREAKAIHYSVESKNRLVLKMLDVIDSNRIEWDEDARDIPASFLAIKQSATASGNAVTFTADRTD ETGHADIFFAIAHALANEPIGYRNKRRSTWIFGDEENKNAA
Sequences:
>Translated_601_residues MAYSEEVIAAAKALYLKRHTPKEIQRKLKLSSPRVVYYWATKYEWYAQLSTDCIEDAIAQRLTLLAAREHKSDVECDELD RLIGHHVKLMAQKNKHAERMAEIAQRRATGADYVAATGEAEAAEGEGRRKGRRKQNDISELTAESFTPFLDNLFKYQLHL RDNKFRRVRNLLKARQIGATYYFAFEAFEDAVLTGDNQIFLSASRRQAEVFRTYILKIAQVEFGIQLKGNPIRLSNMAEL HFLATNSNTAQSNSGHLYIDEYLWISKFTTFNEVASGMATQSHWRLTYFSTPSAKNHQGYAFWSGDEWRRGNAERKSVVF PAFDELRDGGRECPDKQWRYVVTMEDAIADGFNRADIEELRERYGENAFNRLYMCVFVDDKDSVFDFAKLVRCGVDPHIW QDFHPDEAAPLGNREVWGGFDPARSGDNATFVVIAVPLLAVERFRVLEKHHWRGLSFQWMADQIRTIKSRYNMTHIGIDV TGIGYGVYELVQGFARREAKAIHYSVESKNRLVLKMLDVIDSNRIEWDEDARDIPASFLAIKQSATASGNAVTFTADRTD ETGHADIFFAIAHALANEPIGYRNKRRSTWIFGDEENKNAA >Mature_600_residues AYSEEVIAAAKALYLKRHTPKEIQRKLKLSSPRVVYYWATKYEWYAQLSTDCIEDAIAQRLTLLAAREHKSDVECDELDR LIGHHVKLMAQKNKHAERMAEIAQRRATGADYVAATGEAEAAEGEGRRKGRRKQNDISELTAESFTPFLDNLFKYQLHLR DNKFRRVRNLLKARQIGATYYFAFEAFEDAVLTGDNQIFLSASRRQAEVFRTYILKIAQVEFGIQLKGNPIRLSNMAELH FLATNSNTAQSNSGHLYIDEYLWISKFTTFNEVASGMATQSHWRLTYFSTPSAKNHQGYAFWSGDEWRRGNAERKSVVFP AFDELRDGGRECPDKQWRYVVTMEDAIADGFNRADIEELRERYGENAFNRLYMCVFVDDKDSVFDFAKLVRCGVDPHIWQ DFHPDEAAPLGNREVWGGFDPARSGDNATFVVIAVPLLAVERFRVLEKHHWRGLSFQWMADQIRTIKSRYNMTHIGIDVT GIGYGVYELVQGFARREAKAIHYSVESKNRLVLKMLDVIDSNRIEWDEDARDIPASFLAIKQSATASGNAVTFTADRTDE TGHADIFFAIAHALANEPIGYRNKRRSTWIFGDEENKNAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68905; Mature: 68774
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYSEEVIAAAKALYLKRHTPKEIQRKLKLSSPRVVYYWATKYEWYAQLSTDCIEDAIAQ CCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEECCEEEHHHHHHHHHHHHHHH RLTLLAAREHKSDVECDELDRLIGHHVKLMAQKNKHAERMAEIAQRRATGADYVAATGEA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC EAAEGEGRRKGRRKQNDISELTAESFTPFLDNLFKYQLHLRDNKFRRVRNLLKARQIGAT CCCCCCCHHHCCCHHHHHHHHHHHHCCHHHHHHHHEEEEECCHHHHHHHHHHHHHHCCCE YYFAFEAFEDAVLTGDNQIFLSASRRQAEVFRTYILKIAQVEFGIQLKGNPIRLSNMAEL EEEEEHHHCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHEEEEEEECCCEEEECCCEEE HFLATNSNTAQSNSGHLYIDEYLWISKFTTFNEVASGMATQSHWRLTYFSTPSAKNHQGY EEEEECCCCCCCCCCCEEEECEEEHHHCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCE AFWSGDEWRRGNAERKSVVFPAFDELRDGGRECPDKQWRYVVTMEDAIADGFNRADIEEL EEECCCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCCEEEEEEHHHHHCCCCCCCHHHH RERYGENAFNRLYMCVFVDDKDSVFDFAKLVRCGVDPHIWQDFHPDEAAPLGNREVWGGF HHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCC DPARSGDNATFVVIAVPLLAVERFRVLEKHHWRGLSFQWMADQIRTIKSRYNMTHIGIDV CCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEEE TGIGYGVYELVQGFARREAKAIHYSVESKNRLVLKMLDVIDSNRIEWDEDARDIPASFLA EECCHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHCCHHHHH IKQSATASGNAVTFTADRTDETGHADIFFAIAHALANEPIGYRNKRRSTWIFGDEENKNA HHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCC A C >Mature Secondary Structure AYSEEVIAAAKALYLKRHTPKEIQRKLKLSSPRVVYYWATKYEWYAQLSTDCIEDAIAQ CCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEECCEEEHHHHHHHHHHHHHHH RLTLLAAREHKSDVECDELDRLIGHHVKLMAQKNKHAERMAEIAQRRATGADYVAATGEA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC EAAEGEGRRKGRRKQNDISELTAESFTPFLDNLFKYQLHLRDNKFRRVRNLLKARQIGAT CCCCCCCHHHCCCHHHHHHHHHHHHCCHHHHHHHHEEEEECCHHHHHHHHHHHHHHCCCE YYFAFEAFEDAVLTGDNQIFLSASRRQAEVFRTYILKIAQVEFGIQLKGNPIRLSNMAEL EEEEEHHHCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHEEEEEEECCCEEEECCCEEE HFLATNSNTAQSNSGHLYIDEYLWISKFTTFNEVASGMATQSHWRLTYFSTPSAKNHQGY EEEEECCCCCCCCCCCEEEECEEEHHHCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCE AFWSGDEWRRGNAERKSVVFPAFDELRDGGRECPDKQWRYVVTMEDAIADGFNRADIEEL EEECCCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCCEEEEEEHHHHHCCCCCCCHHHH RERYGENAFNRLYMCVFVDDKDSVFDFAKLVRCGVDPHIWQDFHPDEAAPLGNREVWGGF HHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCC DPARSGDNATFVVIAVPLLAVERFRVLEKHHWRGLSFQWMADQIRTIKSRYNMTHIGIDV CCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEEE TGIGYGVYELVQGFARREAKAIHYSVESKNRLVLKMLDVIDSNRIEWDEDARDIPASFLA EECCHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHCCHHHHH IKQSATASGNAVTFTADRTDETGHADIFFAIAHALANEPIGYRNKRRSTWIFGDEENKNA HHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA