Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238920149

Identifier: 238920149

GI number: 238920149

Start: 2163503

End: 2165308

Strand: Reverse

Name: 238920149

Synonym: NT01EI_2255

Alternate gene names: NA

Gene position: 2165308-2163503 (Counterclockwise)

Preceding gene: 238920171

Following gene: 238920148

Centisome position: 56.8

GC content: 55.98

Gene sequence:

>1806_bases
ATGGCCTATTCTGAAGAAGTGATCGCTGCGGCTAAGGCGCTCTACTTAAAGCGGCACACGCCAAAGGAAATACAGCGCAA
ATTAAAGCTAAGCAGCCCGCGAGTGGTGTATTACTGGGCGACCAAATATGAATGGTATGCACAGCTCAGTACCGATTGCA
TCGAGGATGCCATCGCCCAGCGCCTGACCCTGCTTGCTGCCCGCGAGCATAAGAGCGACGTGGAATGTGACGAGCTGGAT
CGGCTTATTGGCCATCACGTTAAGTTGATGGCGCAGAAGAATAAGCATGCGGAGCGGATGGCCGAGATTGCACAGCGGCG
TGCTACCGGGGCTGACTATGTCGCTGCTACGGGGGAGGCTGAGGCGGCCGAGGGGGAAGGGAGGCGCAAGGGACGGCGTA
AACAGAATGATATTTCTGAGTTGACCGCCGAGAGCTTCACGCCGTTTCTGGATAACCTGTTCAAGTATCAGCTGCATCTG
CGTGACAATAAATTTCGCCGCGTGCGTAATTTGCTCAAGGCGCGCCAGATTGGCGCCACCTACTATTTTGCCTTTGAGGC
ATTCGAAGATGCGGTGCTGACGGGGGATAACCAAATCTTCCTGTCGGCCTCCCGGCGCCAGGCCGAAGTCTTTCGCACCT
ATATCCTGAAAATCGCACAGGTTGAATTCGGCATTCAGTTAAAAGGGAATCCGATCAGGCTGAGCAATATGGCCGAGCTG
CATTTTCTGGCCACCAACTCCAATACGGCACAGTCGAACTCCGGCCATTTGTATATCGATGAGTATCTGTGGATCTCGAA
ATTTACCACCTTTAATGAGGTGGCCTCCGGGATGGCGACCCAGAGCCATTGGCGCTTGACCTATTTCTCCACTCCCTCCG
CCAAAAACCACCAGGGCTATGCGTTTTGGAGCGGTGACGAATGGCGGCGTGGCAACGCCGAGCGCAAGAGCGTGGTGTTC
CCGGCATTCGACGAACTGCGTGACGGTGGCCGTGAATGCCCGGATAAGCAGTGGCGCTACGTGGTGACGATGGAGGATGC
CATCGCCGACGGATTTAACCGGGCAGATATTGAGGAGCTGCGCGAGCGTTACGGCGAAAACGCCTTTAACCGGCTGTATA
TGTGCGTTTTTGTGGATGACAAAGACAGCGTATTCGACTTCGCCAAACTGGTGCGGTGTGGCGTTGATCCGCATATCTGG
CAGGACTTTCATCCCGACGAGGCGGCGCCGCTGGGTAATCGTGAGGTGTGGGGCGGGTTTGACCCGGCGCGCAGCGGAGA
TAATGCGACCTTTGTCGTCATCGCCGTCCCATTGCTGGCGGTGGAGCGGTTCCGGGTGCTGGAAAAGCACCACTGGCGCG
GCCTGTCATTCCAGTGGATGGCCGACCAGATTCGGACGATCAAATCGCGCTACAACATGACCCATATCGGCATCGATGTG
ACCGGCATCGGCTATGGCGTCTATGAACTGGTGCAGGGGTTTGCACGGCGTGAGGCCAAGGCCATTCACTACAGCGTCGA
GTCAAAAAATCGCCTGGTGCTGAAAATGCTGGATGTCATCGACAGCAATCGTATCGAGTGGGATGAAGACGCCAGAGATA
TCCCCGCGTCGTTCCTGGCGATAAAGCAGAGCGCGACCGCCTCCGGCAATGCGGTGACCTTTACCGCCGACCGTACCGAT
GAAACCGGACACGCCGATATCTTCTTTGCCATCGCTCACGCCCTGGCCAATGAGCCCATCGGCTATAGGAACAAACGCAG
GTCAACCTGGATTTTTGGTGATGAAGAAAACAAAAACGCCGCCTAA

Upstream 100 bases:

>100_bases
GGCTATGGCGGGGTATCCGAAACTATCCGCTTTCCCGCTCTCGCCGCCGCGTGGGTTCCCACAGAGAATTGACGGAACAC
AATCAACGCGGTGATAGGTA

Downstream 100 bases:

>100_bases
GGCGCGCGGCGGCAAGCTGGGACAGCGCGCTATGCGGCACCGTTCGCCGGGGAGCTTTATCGAGTTTGGCGATCCCGAGC
CGGTCGCGGCCTGGGGGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Terminase ATPase Subunit; Terminase; Phage-Related Terminase ATPase Subunit; Terminase Related Protein; Bacteriophage Terminase; Orf16-Like Phage Protein; Phage Terminase ATPase Subunit P; Mu-Like Prophage FluMu Protein Gp; Prophage; ATPase Subunit Of Terminase; Phage Gene; Terminase Subunit; Phage P2 Terminase ATPase Subunit GpP-Like Protein; Bacteriophage Terminase Large Subunit; Prophage Large Terminase Protein; Fels-2 Prophage Protein; Phage Terminase Subunit GpP; Terminase Large Subunit; DNA-Dependent ATPase Terminase Subunit; Terminase ATPase Subunit Bacteriophage Origin; Bacteriophage P2 GPP Capsid Protein; Phage Terminase Subunit; Phage-Related Terminase

Number of amino acids: Translated: 601; Mature: 600

Protein sequence:

>601_residues
MAYSEEVIAAAKALYLKRHTPKEIQRKLKLSSPRVVYYWATKYEWYAQLSTDCIEDAIAQRLTLLAAREHKSDVECDELD
RLIGHHVKLMAQKNKHAERMAEIAQRRATGADYVAATGEAEAAEGEGRRKGRRKQNDISELTAESFTPFLDNLFKYQLHL
RDNKFRRVRNLLKARQIGATYYFAFEAFEDAVLTGDNQIFLSASRRQAEVFRTYILKIAQVEFGIQLKGNPIRLSNMAEL
HFLATNSNTAQSNSGHLYIDEYLWISKFTTFNEVASGMATQSHWRLTYFSTPSAKNHQGYAFWSGDEWRRGNAERKSVVF
PAFDELRDGGRECPDKQWRYVVTMEDAIADGFNRADIEELRERYGENAFNRLYMCVFVDDKDSVFDFAKLVRCGVDPHIW
QDFHPDEAAPLGNREVWGGFDPARSGDNATFVVIAVPLLAVERFRVLEKHHWRGLSFQWMADQIRTIKSRYNMTHIGIDV
TGIGYGVYELVQGFARREAKAIHYSVESKNRLVLKMLDVIDSNRIEWDEDARDIPASFLAIKQSATASGNAVTFTADRTD
ETGHADIFFAIAHALANEPIGYRNKRRSTWIFGDEENKNAA

Sequences:

>Translated_601_residues
MAYSEEVIAAAKALYLKRHTPKEIQRKLKLSSPRVVYYWATKYEWYAQLSTDCIEDAIAQRLTLLAAREHKSDVECDELD
RLIGHHVKLMAQKNKHAERMAEIAQRRATGADYVAATGEAEAAEGEGRRKGRRKQNDISELTAESFTPFLDNLFKYQLHL
RDNKFRRVRNLLKARQIGATYYFAFEAFEDAVLTGDNQIFLSASRRQAEVFRTYILKIAQVEFGIQLKGNPIRLSNMAEL
HFLATNSNTAQSNSGHLYIDEYLWISKFTTFNEVASGMATQSHWRLTYFSTPSAKNHQGYAFWSGDEWRRGNAERKSVVF
PAFDELRDGGRECPDKQWRYVVTMEDAIADGFNRADIEELRERYGENAFNRLYMCVFVDDKDSVFDFAKLVRCGVDPHIW
QDFHPDEAAPLGNREVWGGFDPARSGDNATFVVIAVPLLAVERFRVLEKHHWRGLSFQWMADQIRTIKSRYNMTHIGIDV
TGIGYGVYELVQGFARREAKAIHYSVESKNRLVLKMLDVIDSNRIEWDEDARDIPASFLAIKQSATASGNAVTFTADRTD
ETGHADIFFAIAHALANEPIGYRNKRRSTWIFGDEENKNAA
>Mature_600_residues
AYSEEVIAAAKALYLKRHTPKEIQRKLKLSSPRVVYYWATKYEWYAQLSTDCIEDAIAQRLTLLAAREHKSDVECDELDR
LIGHHVKLMAQKNKHAERMAEIAQRRATGADYVAATGEAEAAEGEGRRKGRRKQNDISELTAESFTPFLDNLFKYQLHLR
DNKFRRVRNLLKARQIGATYYFAFEAFEDAVLTGDNQIFLSASRRQAEVFRTYILKIAQVEFGIQLKGNPIRLSNMAELH
FLATNSNTAQSNSGHLYIDEYLWISKFTTFNEVASGMATQSHWRLTYFSTPSAKNHQGYAFWSGDEWRRGNAERKSVVFP
AFDELRDGGRECPDKQWRYVVTMEDAIADGFNRADIEELRERYGENAFNRLYMCVFVDDKDSVFDFAKLVRCGVDPHIWQ
DFHPDEAAPLGNREVWGGFDPARSGDNATFVVIAVPLLAVERFRVLEKHHWRGLSFQWMADQIRTIKSRYNMTHIGIDVT
GIGYGVYELVQGFARREAKAIHYSVESKNRLVLKMLDVIDSNRIEWDEDARDIPASFLAIKQSATASGNAVTFTADRTDE
TGHADIFFAIAHALANEPIGYRNKRRSTWIFGDEENKNAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68905; Mature: 68774

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYSEEVIAAAKALYLKRHTPKEIQRKLKLSSPRVVYYWATKYEWYAQLSTDCIEDAIAQ
CCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEECCEEEHHHHHHHHHHHHHHH
RLTLLAAREHKSDVECDELDRLIGHHVKLMAQKNKHAERMAEIAQRRATGADYVAATGEA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC
EAAEGEGRRKGRRKQNDISELTAESFTPFLDNLFKYQLHLRDNKFRRVRNLLKARQIGAT
CCCCCCCHHHCCCHHHHHHHHHHHHCCHHHHHHHHEEEEECCHHHHHHHHHHHHHHCCCE
YYFAFEAFEDAVLTGDNQIFLSASRRQAEVFRTYILKIAQVEFGIQLKGNPIRLSNMAEL
EEEEEHHHCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHEEEEEEECCCEEEECCCEEE
HFLATNSNTAQSNSGHLYIDEYLWISKFTTFNEVASGMATQSHWRLTYFSTPSAKNHQGY
EEEEECCCCCCCCCCCEEEECEEEHHHCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCE
AFWSGDEWRRGNAERKSVVFPAFDELRDGGRECPDKQWRYVVTMEDAIADGFNRADIEEL
EEECCCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCCEEEEEEHHHHHCCCCCCCHHHH
RERYGENAFNRLYMCVFVDDKDSVFDFAKLVRCGVDPHIWQDFHPDEAAPLGNREVWGGF
HHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCC
DPARSGDNATFVVIAVPLLAVERFRVLEKHHWRGLSFQWMADQIRTIKSRYNMTHIGIDV
CCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEEE
TGIGYGVYELVQGFARREAKAIHYSVESKNRLVLKMLDVIDSNRIEWDEDARDIPASFLA
EECCHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHCCHHHHH
IKQSATASGNAVTFTADRTDETGHADIFFAIAHALANEPIGYRNKRRSTWIFGDEENKNA
HHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCC
A
C
>Mature Secondary Structure 
AYSEEVIAAAKALYLKRHTPKEIQRKLKLSSPRVVYYWATKYEWYAQLSTDCIEDAIAQ
CCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEEECCEEEHHHHHHHHHHHHHHH
RLTLLAAREHKSDVECDELDRLIGHHVKLMAQKNKHAERMAEIAQRRATGADYVAATGEA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC
EAAEGEGRRKGRRKQNDISELTAESFTPFLDNLFKYQLHLRDNKFRRVRNLLKARQIGAT
CCCCCCCHHHCCCHHHHHHHHHHHHCCHHHHHHHHEEEEECCHHHHHHHHHHHHHHCCCE
YYFAFEAFEDAVLTGDNQIFLSASRRQAEVFRTYILKIAQVEFGIQLKGNPIRLSNMAEL
EEEEEHHHCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHEEEEEEECCCEEEECCCEEE
HFLATNSNTAQSNSGHLYIDEYLWISKFTTFNEVASGMATQSHWRLTYFSTPSAKNHQGY
EEEEECCCCCCCCCCCEEEECEEEHHHCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCE
AFWSGDEWRRGNAERKSVVFPAFDELRDGGRECPDKQWRYVVTMEDAIADGFNRADIEEL
EEECCCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCCEEEEEEHHHHHCCCCCCCHHHH
RERYGENAFNRLYMCVFVDDKDSVFDFAKLVRCGVDPHIWQDFHPDEAAPLGNREVWGGF
HHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCC
DPARSGDNATFVVIAVPLLAVERFRVLEKHHWRGLSFQWMADQIRTIKSRYNMTHIGIDV
CCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEEE
TGIGYGVYELVQGFARREAKAIHYSVESKNRLVLKMLDVIDSNRIEWDEDARDIPASFLA
EECCHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHCCHHHHH
IKQSATASGNAVTFTADRTDETGHADIFFAIAHALANEPIGYRNKRRSTWIFGDEENKNA
HHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA