| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920139
Identifier: 238920139
GI number: 238920139
Start: 2155094
End: 2155630
Strand: Direct
Name: 238920139
Synonym: NT01EI_2245
Alternate gene names: NA
Gene position: 2155094-2155630 (Clockwise)
Preceding gene: 238920138
Following gene: 238920140
Centisome position: 56.53
GC content: 56.8
Gene sequence:
>537_bases ATGGCGCACACATTGATTTTCAGTGAGGCACTAAAAACCGCCATTCTTGATGGCTGCAAAACCGTGACACGTCGCCCGAT AAAATCCGCCTGTACCCGATCTGTCATTAAATCAGATCAGTGGTACTGGGAGACGGCCTTTAAGACCATGACCACCCTTC CTCTGCCTGAGCGTGACTGCGAGCTGGTTATCGCCGCCAACACCCCCGTTCTCATTAAGGCCTCGCAGGCGTTTATGATT TCACGGTGCCCTCATGGGAACGCAGGCGATCTCATTGAGCTGGCGACACGCCGCGCCGATCAATCCGTGACCCCCTTCGC CCGCGCGGAGCTAAAAGCCATCGCCATTGAACTGCTCCATGACATCACCGACCACGCCGCCATCGCCGAGGGTATGCCGC CGGACACTCCCCGGGAACATTTCCGCTGTATCTGGGATGGTTTCTACCATTACACCCCCTACAGCTGGCGCTGGAACCCG GCAGTTTGGGTATTGCAGTTTGCACCGACCGAAATCTTAGCGGAGGCACACCGATGA
Upstream 100 bases:
>100_bases GGGTGATTAATATCACCGACCGTTATCGGCTGTTCAGCCTGGATGAAGGAAATACATGGAAGCTGCTTAAACACCCACAA TACACCAGGAATATACGCAA
Downstream 100 bases:
>100_bases AACGCCTATGGACAAAACAGGAGGAGCGACAGCTGGAGCAGGGGATCGCCGATGGCCAGAGCCTCAAAGCGATCGCCGGG CAGCTGGGCCGCACCTATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MAHTLIFSEALKTAILDGCKTVTRRPIKSACTRSVIKSDQWYWETAFKTMTTLPLPERDCELVIAANTPVLIKASQAFMI SRCPHGNAGDLIELATRRADQSVTPFARAELKAIAIELLHDITDHAAIAEGMPPDTPREHFRCIWDGFYHYTPYSWRWNP AVWVLQFAPTEILAEAHR
Sequences:
>Translated_178_residues MAHTLIFSEALKTAILDGCKTVTRRPIKSACTRSVIKSDQWYWETAFKTMTTLPLPERDCELVIAANTPVLIKASQAFMI SRCPHGNAGDLIELATRRADQSVTPFARAELKAIAIELLHDITDHAAIAEGMPPDTPREHFRCIWDGFYHYTPYSWRWNP AVWVLQFAPTEILAEAHR >Mature_177_residues AHTLIFSEALKTAILDGCKTVTRRPIKSACTRSVIKSDQWYWETAFKTMTTLPLPERDCELVIAANTPVLIKASQAFMIS RCPHGNAGDLIELATRRADQSVTPFARAELKAIAIELLHDITDHAAIAEGMPPDTPREHFRCIWDGFYHYTPYSWRWNPA VWVLQFAPTEILAEAHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20163; Mature: 20032
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHTLIFSEALKTAILDGCKTVTRRPIKSACTRSVIKSDQWYWETAFKTMTTLPLPERDC CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC ELVIAANTPVLIKASQAFMISRCPHGNAGDLIELATRRADQSVTPFARAELKAIAIELLH CEEEECCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH DITDHAAIAEGMPPDTPREHFRCIWDGFYHYTPYSWRWNPAVWVLQFAPTEILAEAHR HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCEEEEEEECCHHHHHHCCC >Mature Secondary Structure AHTLIFSEALKTAILDGCKTVTRRPIKSACTRSVIKSDQWYWETAFKTMTTLPLPERDC CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC ELVIAANTPVLIKASQAFMISRCPHGNAGDLIELATRRADQSVTPFARAELKAIAIELLH CEEEECCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH DITDHAAIAEGMPPDTPREHFRCIWDGFYHYTPYSWRWNPAVWVLQFAPTEILAEAHR HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCEEEEEEECCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA