| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920140
Identifier: 238920140
GI number: 238920140
Start: 2155627
End: 2155932
Strand: Direct
Name: 238920140
Synonym: NT01EI_2246
Alternate gene names: NA
Gene position: 2155627-2155932 (Clockwise)
Preceding gene: 238920139
Following gene: 238920141
Centisome position: 56.54
GC content: 58.17
Gene sequence:
>306_bases ATGAAACGCCTATGGACAAAACAGGAGGAGCGACAGCTGGAGCAGGGGATCGCCGATGGCCAGAGCCTCAAAGCGATCGC CGGGCAGCTGGGCCGCACCTATGCCTCCGTGAGCCAAAAGACCTACGTCATGGGGTTGCCACGCCGCGCCTTTTATATCG ACCAATGGGATATCAATATGGCCCATGCCCTGCGCGCCGAGGGGCTGACTCACCCGGCCATCGCCGAAAAGCTCGAGCTA GAGCGCCGCACGGTTGATTACATCATCTACCACAAAAAACCAGATTCCTGTCATGCAGCCGTGTAA
Upstream 100 bases:
>100_bases GGGATGGTTTCTACCATTACACCCCCTACAGCTGGCGCTGGAACCCGGCAGTTTGGGTATTGCAGTTTGCACCGACCGAA ATCTTAGCGGAGGCACACCG
Downstream 100 bases:
>100_bases TCACTGCCTCGCCCGCCCTATCGCCCGCGATCGGGCTCACAAGTTCGATACGGCCCTGGCCAGTGCACCACTGGCCAGGG CCGGCACCGCCAAAAACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MKRLWTKQEERQLEQGIADGQSLKAIAGQLGRTYASVSQKTYVMGLPRRAFYIDQWDINMAHALRAEGLTHPAIAEKLEL ERRTVDYIIYHKKPDSCHAAV
Sequences:
>Translated_101_residues MKRLWTKQEERQLEQGIADGQSLKAIAGQLGRTYASVSQKTYVMGLPRRAFYIDQWDINMAHALRAEGLTHPAIAEKLEL ERRTVDYIIYHKKPDSCHAAV >Mature_101_residues MKRLWTKQEERQLEQGIADGQSLKAIAGQLGRTYASVSQKTYVMGLPRRAFYIDQWDINMAHALRAEGLTHPAIAEKLEL ERRTVDYIIYHKKPDSCHAAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11583; Mature: 11583
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS00037 MYB_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLWTKQEERQLEQGIADGQSLKAIAGQLGRTYASVSQKTYVMGLPRRAFYIDQWDINM CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCH AHALRAEGLTHPAIAEKLELERRTVDYIIYHKKPDSCHAAV HHHHHHCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCC >Mature Secondary Structure MKRLWTKQEERQLEQGIADGQSLKAIAGQLGRTYASVSQKTYVMGLPRRAFYIDQWDINM CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCCCH AHALRAEGLTHPAIAEKLELERRTVDYIIYHKKPDSCHAAV HHHHHHCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA