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The map label for this gene is yajR [H]

Identifier: 238920116

GI number: 238920116

Start: 2135634

End: 2136998

Strand: Reverse

Name: yajR [H]

Synonym: NT01EI_2222

Alternate gene names: 238920116

Gene position: 2136998-2135634 (Counterclockwise)

Preceding gene: 238920117

Following gene: 238920114

Centisome position: 56.06

GC content: 55.6

Gene sequence:

>1365_bases
GTGAACGATAATTCAATGACCCCACAGGAGCGTCGCGCCACCTGGGGATTGGGTTGCGTATTCTCCCTGCGTATGCTTGG
CATGTTTATGGTATTGCCGGTGCTAACTACGTACGGTATGGCGCTCAACGGTGCCAGCGAAACGCTGATCGGTATCGCCA
TCGGTATCTATGGCCTGATGCAGGCGCTGTTTCAGATCCCATTGGGTTTGCTCTCCGATCGTATTGGTCGCAAGCCGTTG
ATCATCGCTGGACTGCTGATCTTTGCCCTTGGCAGCGCCATCGCCGCCGTCACCGATTCGATCTGGGGTGTGATCCTTGG
CCGCGCGCTGCAAGGCTCCGGTGCAATTGCTGCTGCAGTGATGGCACTGCTCTCTGATCTCACCCGGGAGCAGAACCGCA
CTAAGGCGATGGCATTTATCGGCGTCAGCTTTGGTATCATCTTTGCTATCGCCATGGTCTTGGGGCCTATCATCACCCAC
GCCTGCGGCCTGAGTGCATTGTTTTGGATGATCACCGTGCTGGCGTTGGCCGGCATCGTCATCACCCTGGCTATAGTACC
TTGCGCTGATACCCATCTGTTGAATCGCGACTCAGGCATTGTGCGCGGTAGCTTCAGCCGAGTGCTGAACAATTCGCGTT
TATTGAAGCTCAACATCGGCATCCTGTGCCTGCATACCTTGTTGATGTCGAGCTTCGTGGCACTGCCGCTGGCGTTGGAG
AGAGCCGGTCTGGCGGCCAATATGCATTGGGTAATCTACCTGGTGACCATGCTGATATCATTTGTCGCCGTGGTGCCTTG
CATCATCTACGCCGAGAAATGCCGCCGTATGAAACGGGTCTTTATGAGTTGCGTCGCGCTACTGTTCTGTGCCGAAGTGT
TGATGTGGCTCTCCGGCACACGCCTGTGGGGTCTCATCGTTGGCATACAGCTGTTCTTTATGGCCTTCAATGTGATGGAG
GCGATCCTGCCTTCGCTGATCAGCAAAGAGTCACCGGCAGGCTATAAAGGTACCGCGATGGGGGTTTATTCCACCAGCCA
GTTTATCGGAGTGGCGCTTGGTGGCGGCCTCGGCGGCTGGCTGTATGCTTTGCAGGGGGCCGGTCTGGTGTTTATCGCCG
GCGCCCTGGTGGCTGCCTTCTGGTTCTTGATCAGTCGTACCATGAAAGAACCACCATATGTCAGTAGCCTACGTATTATC
CTGACAGAGTTGGCATTGCAGGATCCCACCCTGGCAAATCGCTTACAGGCGCAGCCTGGCGTTGTAGAGGTGATTGTTGT
ACCGCAAGAGCGCAGTGCCTATGTCAAGGTGGATACCAAACAGAGTCATCGGGCGCAGTTGGAAGCGTTGGCCAATTTGC
GATAA

Upstream 100 bases:

>100_bases
TTGATTTACCCTTGCTCTCCCATACTGGACAGTTTTGTATAAACCCTGCGATCAGGCGCTCTCTCAACGCGTGATCGCAT
GATGTTTACCGAGGTTTGCT

Downstream 100 bases:

>100_bases
GAGTACACATCTATCCCTGAAAACCCAAATTGATAGAGCAGGTTTTGACTGCGGTGTGCTGAGGGCATCGGTGGGTTATT
CAGCCAGAGCGGCGTCAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MNDNSMTPQERRATWGLGCVFSLRMLGMFMVLPVLTTYGMALNGASETLIGIAIGIYGLMQALFQIPLGLLSDRIGRKPL
IIAGLLIFALGSAIAAVTDSIWGVILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGIIFAIAMVLGPIITH
ACGLSALFWMITVLALAGIVITLAIVPCADTHLLNRDSGIVRGSFSRVLNNSRLLKLNIGILCLHTLLMSSFVALPLALE
RAGLAANMHWVIYLVTMLISFVAVVPCIIYAEKCRRMKRVFMSCVALLFCAEVLMWLSGTRLWGLIVGIQLFFMAFNVME
AILPSLISKESPAGYKGTAMGVYSTSQFIGVALGGGLGGWLYALQGAGLVFIAGALVAAFWFLISRTMKEPPYVSSLRII
LTELALQDPTLANRLQAQPGVVEVIVVPQERSAYVKVDTKQSHRAQLEALANLR

Sequences:

>Translated_454_residues
MNDNSMTPQERRATWGLGCVFSLRMLGMFMVLPVLTTYGMALNGASETLIGIAIGIYGLMQALFQIPLGLLSDRIGRKPL
IIAGLLIFALGSAIAAVTDSIWGVILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGIIFAIAMVLGPIITH
ACGLSALFWMITVLALAGIVITLAIVPCADTHLLNRDSGIVRGSFSRVLNNSRLLKLNIGILCLHTLLMSSFVALPLALE
RAGLAANMHWVIYLVTMLISFVAVVPCIIYAEKCRRMKRVFMSCVALLFCAEVLMWLSGTRLWGLIVGIQLFFMAFNVME
AILPSLISKESPAGYKGTAMGVYSTSQFIGVALGGGLGGWLYALQGAGLVFIAGALVAAFWFLISRTMKEPPYVSSLRII
LTELALQDPTLANRLQAQPGVVEVIVVPQERSAYVKVDTKQSHRAQLEALANLR
>Mature_454_residues
MNDNSMTPQERRATWGLGCVFSLRMLGMFMVLPVLTTYGMALNGASETLIGIAIGIYGLMQALFQIPLGLLSDRIGRKPL
IIAGLLIFALGSAIAAVTDSIWGVILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGIIFAIAMVLGPIITH
ACGLSALFWMITVLALAGIVITLAIVPCADTHLLNRDSGIVRGSFSRVLNNSRLLKLNIGILCLHTLLMSSFVALPLALE
RAGLAANMHWVIYLVTMLISFVAVVPCIIYAEKCRRMKRVFMSCVALLFCAEVLMWLSGTRLWGLIVGIQLFFMAFNVME
AILPSLISKESPAGYKGTAMGVYSTSQFIGVALGGGLGGWLYALQGAGLVFIAGALVAAFWFLISRTMKEPPYVSSLRII
LTELALQDPTLANRLQAQPGVVEVIVVPQERSAYVKVDTKQSHRAQLEALANLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=448, Percent_Identity=68.9732142857143, Blast_Score=627, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 48824; Mature: 48824

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDNSMTPQERRATWGLGCVFSLRMLGMFMVLPVLTTYGMALNGASETLIGIAIGIYGLM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QALFQIPLGLLSDRIGRKPLIIAGLLIFALGSAIAAVTDSIWGVILGRALQGSGAIAAAV
HHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
MALLSDLTREQNRTKAMAFIGVSFGIIFAIAMVLGPIITHACGLSALFWMITVLALAGIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITLAIVPCADTHLLNRDSGIVRGSFSRVLNNSRLLKLNIGILCLHTLLMSSFVALPLALE
HHHHHHCCCCCHHCCCCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHH
RAGLAANMHWVIYLVTMLISFVAVVPCIIYAEKCRRMKRVFMSCVALLFCAEVLMWLSGT
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
RLWGLIVGIQLFFMAFNVMEAILPSLISKESPAGYKGTAMGVYSTSQFIGVALGGGLGGW
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHCCCHHHH
LYALQGAGLVFIAGALVAAFWFLISRTMKEPPYVSSLRIILTELALQDPTLANRLQAQPG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCC
VVEVIVVPQERSAYVKVDTKQSHRAQLEALANLR
EEEEEEEECCCCCEEEEECCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNDNSMTPQERRATWGLGCVFSLRMLGMFMVLPVLTTYGMALNGASETLIGIAIGIYGLM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
QALFQIPLGLLSDRIGRKPLIIAGLLIFALGSAIAAVTDSIWGVILGRALQGSGAIAAAV
HHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
MALLSDLTREQNRTKAMAFIGVSFGIIFAIAMVLGPIITHACGLSALFWMITVLALAGIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITLAIVPCADTHLLNRDSGIVRGSFSRVLNNSRLLKLNIGILCLHTLLMSSFVALPLALE
HHHHHHCCCCCHHCCCCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHH
RAGLAANMHWVIYLVTMLISFVAVVPCIIYAEKCRRMKRVFMSCVALLFCAEVLMWLSGT
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
RLWGLIVGIQLFFMAFNVMEAILPSLISKESPAGYKGTAMGVYSTSQFIGVALGGGLGGW
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHCCCHHHH
LYALQGAGLVFIAGALVAAFWFLISRTMKEPPYVSSLRIILTELALQDPTLANRLQAQPG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCC
VVEVIVVPQERSAYVKVDTKQSHRAQLEALANLR
EEEEEEEECCCCCEEEEECCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]