| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920096
Identifier: 238920096
GI number: 238920096
Start: 2121965
End: 2122726
Strand: Direct
Name: 238920096
Synonym: NT01EI_2202
Alternate gene names: NA
Gene position: 2121965-2122726 (Clockwise)
Preceding gene: 238920094
Following gene: 238920097
Centisome position: 55.66
GC content: 47.64
Gene sequence:
>762_bases ATGAATATTGAGTCCCTGCTGAGTTTTTTTTATAGAACAGGAAGCCATAAAATAGATGGCAATCAATACCGGCCGGCCAA TACAGAGGGTCCGGTGAGACTGGATTACCTTACAAACATATCAGATAAAAACAAAAACCATCCCGTTCTCATTACATTCA CCCTCAACGAGCGCCACTGCAAGGAACTGACAAAGCTTGGCTGCCACAGACCACTGGACATAATACAGGCGCTCTGTAAT ATCAGCACTTCAGTGGCCAACAGAATGATTACGGATGGAACACCGCTCTCTGAAGAAAGCGATAACGTGCATAAGAGGCT GCGGCAGGATCTTGACTCTTATCTCGGAGCGCGGGCCAATGCGGTGATCGACGACGTGCTGGTATATCATAAGAAAAAAA TCCTTCCTGAAGCCCGTGCGGAAATCGTGCGATCTGCGATGACAGAGTGTGGCTATGGAGAAATCGTGGAGGGGAAAAAA GATGAACAATTACTTAACCTTGCCAGACCCGGCCTAACCGCTGAGCTCAACACGTTAGCCGACAAGGCGTTATCATTAAC CAGCAAGGCGCTCAACTATTTAAATAAAGAGATCAAACCGCTCATCTACGATCTCACCTATGATGCCATTGTCAATCATC CAGTGATTGGTCCAAGACATATGCAGAAACAGGCGTATATGCCGACAGCGCAGGTGTTAGACCTGGTCCGGACGAAAACG GAGAGTTGGGTAGCGGAGGAGTGGCAGCTAACGAGATTATGA
Upstream 100 bases:
>100_bases AACGATGGTGGTGAAATCACATCTCGCTCTTTGGCGAATACTATAGATATAGCGAAAAACAACTTTCCCTTACACTTTCT GTATATATAGAGCGTGCACA
Downstream 100 bases:
>100_bases TGCGCCGCTGAGAAACCGCCGGCGCAAACGCCGATAATGGGGGTTTGCCTACGCCGAGCCACCGGGATACCTGCATGCGC TTTTTAAGAGTGCTATACCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MNIESLLSFFYRTGSHKIDGNQYRPANTEGPVRLDYLTNISDKNKNHPVLITFTLNERHCKELTKLGCHRPLDIIQALCN ISTSVANRMITDGTPLSEESDNVHKRLRQDLDSYLGARANAVIDDVLVYHKKKILPEARAEIVRSAMTECGYGEIVEGKK DEQLLNLARPGLTAELNTLADKALSLTSKALNYLNKEIKPLIYDLTYDAIVNHPVIGPRHMQKQAYMPTAQVLDLVRTKT ESWVAEEWQLTRL
Sequences:
>Translated_253_residues MNIESLLSFFYRTGSHKIDGNQYRPANTEGPVRLDYLTNISDKNKNHPVLITFTLNERHCKELTKLGCHRPLDIIQALCN ISTSVANRMITDGTPLSEESDNVHKRLRQDLDSYLGARANAVIDDVLVYHKKKILPEARAEIVRSAMTECGYGEIVEGKK DEQLLNLARPGLTAELNTLADKALSLTSKALNYLNKEIKPLIYDLTYDAIVNHPVIGPRHMQKQAYMPTAQVLDLVRTKT ESWVAEEWQLTRL >Mature_253_residues MNIESLLSFFYRTGSHKIDGNQYRPANTEGPVRLDYLTNISDKNKNHPVLITFTLNERHCKELTKLGCHRPLDIIQALCN ISTSVANRMITDGTPLSEESDNVHKRLRQDLDSYLGARANAVIDDVLVYHKKKILPEARAEIVRSAMTECGYGEIVEGKK DEQLLNLARPGLTAELNTLADKALSLTSKALNYLNKEIKPLIYDLTYDAIVNHPVIGPRHMQKQAYMPTAQVLDLVRTKT ESWVAEEWQLTRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28670; Mature: 28670
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIESLLSFFYRTGSHKIDGNQYRPANTEGPVRLDYLTNISDKNKNHPVLITFTLNERHC CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCHHHH KELTKLGCHRPLDIIQALCNISTSVANRMITDGTPLSEESDNVHKRLRQDLDSYLGARAN HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHH AVIDDVLVYHKKKILPEARAEIVRSAMTECGYGEIVEGKKDEQLLNLARPGLTAELNTLA HHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHH DKALSLTSKALNYLNKEIKPLIYDLTYDAIVNHPVIGPRHMQKQAYMPTAQVLDLVRTKT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHH ESWVAEEWQLTRL HHHHHHHHHHCCC >Mature Secondary Structure MNIESLLSFFYRTGSHKIDGNQYRPANTEGPVRLDYLTNISDKNKNHPVLITFTLNERHC CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCHHHH KELTKLGCHRPLDIIQALCNISTSVANRMITDGTPLSEESDNVHKRLRQDLDSYLGARAN HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHH AVIDDVLVYHKKKILPEARAEIVRSAMTECGYGEIVEGKKDEQLLNLARPGLTAELNTLA HHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHH DKALSLTSKALNYLNKEIKPLIYDLTYDAIVNHPVIGPRHMQKQAYMPTAQVLDLVRTKT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHH ESWVAEEWQLTRL HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA