| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is cbiH [H]
Identifier: 238920080
GI number: 238920080
Start: 2110676
End: 2111401
Strand: Reverse
Name: cbiH [H]
Synonym: NT01EI_2185
Alternate gene names: 238920080
Gene position: 2111401-2110676 (Counterclockwise)
Preceding gene: 238920081
Following gene: 238920079
Centisome position: 55.38
GC content: 63.77
Gene sequence:
>726_bases ATGTTAACCGTTATTGGGATCGGCCCCGGCTCACAGGCCATGATGACGATGGAGGCCGTTGAGGCGCTGCAGGCGGCGGA GATCATCGTCGGCTACAAAACCTATACCCACCTGGTGAAAGCCTTTACCGGCGACAAGCAGGTGATCAAGACCGGCATGT GCAAAGAGATCGAACGCTGCCAGACGGCGATTGATCTGGCGCAGGCGGGGCATAACGTCGCCCTGATCAGCAGCGGCGAC GCGGGGATCTATGGCATGGCGGGGCTGGTGCTGGAGCTGGTCAGCCGGCAGGGGCTGTCGGTCGGGGTGCGCCTGATCCC CGGGATGACCGCCAGCATCGCCGCCGCCTCGCTGCTCGGGGCGCCGCTGATGCATGATTTCTGTCATATCAGCCTGAGCG ATCTGCTGACCCCCTGGCCGGTCATCGAAAAGCGCATCGTCGCCGCCGGCGAGGCCGACTTTGTGATCTGTTTCTACAAC CCGCGCAGCCGCGGTCGCGAGGGGCATCTGGCGCGTGCCTTTGCGCTGCTGTCCGCCGTCAAAAGCGCACAGACCCCGGT GGGGGTGGTGAAGTCCGCCGGGCGTAAAAAGCAGGAGAAGTGGCTGACCACCCTGGGGGAGATGGATTTTGCGCCGGTGG ATATGACCAGTCTGGTGATCGTCGGCAATAAGGCCACCTACGTGCAGGACGGCCTGATGATCACGCCGCGGGGCTACGCG CTGTGA
Upstream 100 bases:
>100_bases GCGTCTCGGGACCGGCGGCCTGGCTGCTGAGTCATGGACAGCTATTAGGCGACACCCTGCGGGAGCAGGGCGTCACGATT ACCTTAGGAGTTTCATCCGC
Downstream 100 bases:
>100_bases ACCATGGCGGGGTGCTGGTGATCGGCGGCACCAGCGACGCCCGGGCGCTGTGTCAGCAGCTGGATGCGGCCCGGGTGGCC TACACCCTGTCGGTGGCGAC
Product: precorrin-3B C17-methyltransferase
Products: S-adenosyl-L-homocysteine; Precorrin 4
Alternate protein names: Cobalt-precorrin-3 methylase; Cobalt-precorrin-3 methyltransferase [H]
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MLTVIGIGPGSQAMMTMEAVEALQAAEIIVGYKTYTHLVKAFTGDKQVIKTGMCKEIERCQTAIDLAQAGHNVALISSGD AGIYGMAGLVLELVSRQGLSVGVRLIPGMTASIAAASLLGAPLMHDFCHISLSDLLTPWPVIEKRIVAAGEADFVICFYN PRSRGREGHLARAFALLSAVKSAQTPVGVVKSAGRKKQEKWLTTLGEMDFAPVDMTSLVIVGNKATYVQDGLMITPRGYA L
Sequences:
>Translated_241_residues MLTVIGIGPGSQAMMTMEAVEALQAAEIIVGYKTYTHLVKAFTGDKQVIKTGMCKEIERCQTAIDLAQAGHNVALISSGD AGIYGMAGLVLELVSRQGLSVGVRLIPGMTASIAAASLLGAPLMHDFCHISLSDLLTPWPVIEKRIVAAGEADFVICFYN PRSRGREGHLARAFALLSAVKSAQTPVGVVKSAGRKKQEKWLTTLGEMDFAPVDMTSLVIVGNKATYVQDGLMITPRGYA L >Mature_241_residues MLTVIGIGPGSQAMMTMEAVEALQAAEIIVGYKTYTHLVKAFTGDKQVIKTGMCKEIERCQTAIDLAQAGHNVALISSGD AGIYGMAGLVLELVSRQGLSVGVRLIPGMTASIAAASLLGAPLMHDFCHISLSDLLTPWPVIEKRIVAAGEADFVICFYN PRSRGREGHLARAFALLSAVKSAQTPVGVVKSAGRKKQEKWLTTLGEMDFAPVDMTSLVIVGNKATYVQDGLMITPRGYA L
Specific function: Methyltransferase that catalyzes the methylation of C-17 in cobalt-precorrin-3B to form cobalt-precorrin-4 [H]
COG id: COG1010
COG function: function code H; Precorrin-3B methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR014776 - InterPro: IPR006363 [H]
Pfam domain/function: PF00590 TP_methylase [H]
EC number: 2.1.1.131
Molecular weight: Translated: 25607; Mature: 25607
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTVIGIGPGSQAMMTMEAVEALQAAEIIVGYKTYTHLVKAFTGDKQVIKTGMCKEIERC CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH QTAIDLAQAGHNVALISSGDAGIYGMAGLVLELVSRQGLSVGVRLIPGMTASIAAASLLG HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEECEEECCCCHHHHHHHHHHC APLMHDFCHISLSDLLTPWPVIEKRIVAAGEADFVICFYNPRSRGREGHLARAFALLSAV CHHHHHHHHCCHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH KSAQTPVGVVKSAGRKKQEKWLTTLGEMDFAPVDMTSLVIVGNKATYVQDGLMITPRGYA HHCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCEEECCCCCC L C >Mature Secondary Structure MLTVIGIGPGSQAMMTMEAVEALQAAEIIVGYKTYTHLVKAFTGDKQVIKTGMCKEIERC CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH QTAIDLAQAGHNVALISSGDAGIYGMAGLVLELVSRQGLSVGVRLIPGMTASIAAASLLG HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEECEEECCCCHHHHHHHHHHC APLMHDFCHISLSDLLTPWPVIEKRIVAAGEADFVICFYNPRSRGREGHLARAFALLSAV CHHHHHHHHCCHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH KSAQTPVGVVKSAGRKKQEKWLTTLGEMDFAPVDMTSLVIVGNKATYVQDGLMITPRGYA HHCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCEEECCCCCC L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-adenosyl-L-methionine; Precorrin 3B
Specific reaction: S-adenosyl-L-methionine + precorrin-3B = S-adenosyl-L-homocysteine + precorrin-4
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501034; 11677609 [H]