| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is cbiG [H]
Identifier: 238920081
GI number: 238920081
Start: 2111395
End: 2112456
Strand: Reverse
Name: cbiG [H]
Synonym: NT01EI_2186
Alternate gene names: 238920081
Gene position: 2112456-2111395 (Counterclockwise)
Preceding gene: 238920082
Following gene: 238920080
Centisome position: 55.41
GC content: 67.14
Gene sequence:
>1062_bases ATGAATACCGTAAAGCCTGAATCCATCGCACTGTTTTGCCTGACCCCCGGCGGCGTGCAGCTGGCCAAGCGGCTGGCGAC GCGGCTGCCGCTGACCTGCTTTACCAGCGTGGCACTGTGGGAGCCGGGGTTTATCCCGTTCGAGGGCGGCTTCGCCCAGA CCGCCCGCCGTGCGTTCACCCGCTATTCGGCGCTGATTTTTATCGGCGCGACGGGGATCGCCGTGCGGGTGCTGGCACCG CTGATCAATGACAAGTTCAGCGATCCGGCCGTGGTGGTGATCGATGAGCGCGGCCAGCACGTGATCAGCCTGCTCTCCGG ACATGCGGGGGGGGCGAACGCCCTGACCCGCGATCTGGCGGACATGCTGGGGGCCGATCCGGTGATCACCACCGCCACGG ACGTGAACGGGATGGCCGCGCTGGATACGCTTGCGTTCCAGCTTGATGCCCGGATGAGTGACTTCCGCCCGGCGGTCCGG GTGGTCAATCAGATGCTGGTCAGTCAGCGGCGGGTCGGGCTGTGGTGGGATCCGGCGCTGGCGGCAGAGGTCAGCCGCTG CGATCGGCGGGGATTTATCACCGTGACCGACCTGCAGGCGTTGCCCGCGCTGGATGCGCTGGTGTGCATCACCCTGAGCC GCGATCTGCCGGAAATTCCGCTGCCGCACTGGAAGCTGGTGCCGCAGCGGGTGGTCGCCGGCATCGGCTGTCGGCGGGGT ACCCCTTTCCCACTGTTGGCCGCGCTGCTGGCGCGCCAGCTGGAGGCGCAGCGGATCGACCCGCTGGCGCTGAGGGCGAT CGGCAGCGCTGCGCTGAAGCGCGATGAGCCGGGGCTGATCCAGCTCGCCGCCCGCTGGTGCATCCCGTTTCACACCTTTA GCGCCGATGCGCTGCGCGCACATGAGCACCGCTTTCCGATCTCACCCTTGGTGCGCCGCACGGTCGGCGTCGGGAGCGTC TCGGGACCGGCGGCCTGGCTGCTGAGTCATGGACAGCTATTAGGCGACACCCTGCGGGAGCAGGGCGTCACGATTACCTT AGGAGTTTCATCCGCATGTTAA
Upstream 100 bases:
>100_bases GTCCACGCTGCGGGGATCCGTAAAACGGCGCTGATCCTTGTCGGCAGTTTCCTTGGCGATGAGTATCACTACTCAAAGCT CTATGCGGCGGACTTTAGCC
Downstream 100 bases:
>100_bases CCGTTATTGGGATCGGCCCCGGCTCACAGGCCATGATGACGATGGAGGCCGTTGAGGCGCTGCAGGCGGCGGAGATCATC GTCGGCTACAAAACCTATAC
Product: cobalamin biosynthesis protein CbiG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MNTVKPESIALFCLTPGGVQLAKRLATRLPLTCFTSVALWEPGFIPFEGGFAQTARRAFTRYSALIFIGATGIAVRVLAP LINDKFSDPAVVVIDERGQHVISLLSGHAGGANALTRDLADMLGADPVITTATDVNGMAALDTLAFQLDARMSDFRPAVR VVNQMLVSQRRVGLWWDPALAAEVSRCDRRGFITVTDLQALPALDALVCITLSRDLPEIPLPHWKLVPQRVVAGIGCRRG TPFPLLAALLARQLEAQRIDPLALRAIGSAALKRDEPGLIQLAARWCIPFHTFSADALRAHEHRFPISPLVRRTVGVGSV SGPAAWLLSHGQLLGDTLREQGVTITLGVSSAC
Sequences:
>Translated_353_residues MNTVKPESIALFCLTPGGVQLAKRLATRLPLTCFTSVALWEPGFIPFEGGFAQTARRAFTRYSALIFIGATGIAVRVLAP LINDKFSDPAVVVIDERGQHVISLLSGHAGGANALTRDLADMLGADPVITTATDVNGMAALDTLAFQLDARMSDFRPAVR VVNQMLVSQRRVGLWWDPALAAEVSRCDRRGFITVTDLQALPALDALVCITLSRDLPEIPLPHWKLVPQRVVAGIGCRRG TPFPLLAALLARQLEAQRIDPLALRAIGSAALKRDEPGLIQLAARWCIPFHTFSADALRAHEHRFPISPLVRRTVGVGSV SGPAAWLLSHGQLLGDTLREQGVTITLGVSSAC >Mature_353_residues MNTVKPESIALFCLTPGGVQLAKRLATRLPLTCFTSVALWEPGFIPFEGGFAQTARRAFTRYSALIFIGATGIAVRVLAP LINDKFSDPAVVVIDERGQHVISLLSGHAGGANALTRDLADMLGADPVITTATDVNGMAALDTLAFQLDARMSDFRPAVR VVNQMLVSQRRVGLWWDPALAAEVSRCDRRGFITVTDLQALPALDALVCITLSRDLPEIPLPHWKLVPQRVVAGIGCRRG TPFPLLAALLARQLEAQRIDPLALRAIGSAALKRDEPGLIQLAARWCIPFHTFSADALRAHEHRFPISPLVRRTVGVGSV SGPAAWLLSHGQLLGDTLREQGVTITLGVSSAC
Specific function: Unknown
COG id: COG2073
COG function: function code H; Cobalamin biosynthesis protein CbiG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021745 - InterPro: IPR021744 - InterPro: IPR002750 [H]
Pfam domain/function: PF01890 CbiG; PF11761 CbiG_mid; PF11760 CbiG_N [H]
EC number: NA
Molecular weight: Translated: 37965; Mature: 37965
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTVKPESIALFCLTPGGVQLAKRLATRLPLTCFTSVALWEPGFIPFEGGFAQTARRAFT CCCCCCCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH RYSALIFIGATGIAVRVLAPLINDKFSDPAVVVIDERGQHVISLLSGHAGGANALTRDLA HHHEEEEEECHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHH DMLGADPVITTATDVNGMAALDTLAFQLDARMSDFRPAVRVVNQMLVSQRRVGLWWDPAL HHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHH AAEVSRCDRRGFITVTDLQALPALDALVCITLSRDLPEIPLPHWKLVPQRVVAGIGCRRG HHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCC TPFPLLAALLARQLEAQRIDPLALRAIGSAALKRDEPGLIQLAARWCIPFHTFSADALRA CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHH HEHRFPISPLVRRTVGVGSVSGPAAWLLSHGQLLGDTLREQGVTITLGVSSAC HHCCCCHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHCCCEEEEECCCCC >Mature Secondary Structure MNTVKPESIALFCLTPGGVQLAKRLATRLPLTCFTSVALWEPGFIPFEGGFAQTARRAFT CCCCCCCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH RYSALIFIGATGIAVRVLAPLINDKFSDPAVVVIDERGQHVISLLSGHAGGANALTRDLA HHHEEEEEECHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHH DMLGADPVITTATDVNGMAALDTLAFQLDARMSDFRPAVRVVNQMLVSQRRVGLWWDPAL HHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHH AAEVSRCDRRGFITVTDLQALPALDALVCITLSRDLPEIPLPHWKLVPQRVVAGIGCRRG HHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCC TPFPLLAALLARQLEAQRIDPLALRAIGSAALKRDEPGLIQLAARWCIPFHTFSADALRA CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHH HEHRFPISPLVRRTVGVGSVSGPAAWLLSHGQLLGDTLREQGVTITLGVSSAC HHCCCCHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501034; 11677609 [H]