The gene/protein map for NC_012779 is currently unavailable.
Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

Click here to switch to the map view.

The map label for this gene is 238920059

Identifier: 238920059

GI number: 238920059

Start: 2093119

End: 2094003

Strand: Direct

Name: 238920059

Synonym: NT01EI_2164

Alternate gene names: NA

Gene position: 2093119-2094003 (Clockwise)

Preceding gene: 238920058

Following gene: 238920061

Centisome position: 54.9

GC content: 43.16

Gene sequence:

>885_bases
ATGTTTTTAAAATTCTCTGGGTGGGATGAGTGCAGCATCAACGATTATACCGATTGCTGTTCAAAATATGGCTACAACTC
AGAATCATCTCCTCATTATATCGAGTTTATGTTACATCATGGTGCGGATCTGAGGTTTATCGCCTATAGAAAAAATAAAT
TGCTGGGCGCTGCCTGTCTTGATGGGAAATGGCTGGTAAATGACTTTAAAAACCCCAATAAGTCGATGAGCAACCTGCCA
ATCCCCAGCTCATCTATCGTTCTGCCGTTCTCATCGGAGGTCAAATGTATTGCACCATTCAAAACCAAATGCCTCAGCCC
GCTCAGAAAAAATATCATCAACGCATCATTTCACTTTTTTACCAAGCGGACCGCAGCCTTTGCAAAAAACATCGAAACAG
ACTTTTCCAAAAAGACCATTTCAACCCGACGGCGTGAGATTAAAAAATTTATCGCCGACGGCGGGAGTTTTGTCGACATC
AGCCAGTTTAGCGGGGAAGAGTTGTTTTCAATATATGAAAATTTATTTTTTATGCGCAGGGAAACTACTATTCCTGACCG
AGAGATCAATATCGATTTCTTTGTTAAGTTTAAAAATAACTTTCTCGGTGAGGTCCTCTACCTTAACGATAGCCCCGTCG
GGATCCAGCTACTGATCACCTCAACGTCTACACTGGGCTTCTTCGTTGACTTTATCAATATTGGTTATGATATGGAGATA
AAAGCGCATTCAATCGGCACTATCCTCATGTGGAACAATCTGGAAAAAGCGACAGCGAGAGCCCATGCGCTCGCCCTACC
GCTACATTTCTCCTTCGGCTTTATGTCAGGAAAATACAAGCAACGGTGGTGTAATCCGGTCGGCGTCGGCAAAACCCTGA
TATAG

Upstream 100 bases:

>100_bases
GACATCCAGAAAATCAATAAAATCTCAACAATAGACATATAAAAATATATATTATAATATTCAGTAACAAGTTATAAGGA
AAAAATATTAAGGCATTGCT

Downstream 100 bases:

>100_bases
CCACATCACCTATTTCGTCCAGCGACGGATACGTCACCGAAGCCCACTGCGCCAGAATGCAGTGGGCGGACGATCGCCAA
CGCCCCTCATACAGCTTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Exopolysaccharide Protein Mig-14 Family

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MFLKFSGWDECSINDYTDCCSKYGYNSESSPHYIEFMLHHGADLRFIAYRKNKLLGAACLDGKWLVNDFKNPNKSMSNLP
IPSSSIVLPFSSEVKCIAPFKTKCLSPLRKNIINASFHFFTKRTAAFAKNIETDFSKKTISTRRREIKKFIADGGSFVDI
SQFSGEELFSIYENLFFMRRETTIPDREINIDFFVKFKNNFLGEVLYLNDSPVGIQLLITSTSTLGFFVDFINIGYDMEI
KAHSIGTILMWNNLEKATARAHALALPLHFSFGFMSGKYKQRWCNPVGVGKTLI

Sequences:

>Translated_294_residues
MFLKFSGWDECSINDYTDCCSKYGYNSESSPHYIEFMLHHGADLRFIAYRKNKLLGAACLDGKWLVNDFKNPNKSMSNLP
IPSSSIVLPFSSEVKCIAPFKTKCLSPLRKNIINASFHFFTKRTAAFAKNIETDFSKKTISTRRREIKKFIADGGSFVDI
SQFSGEELFSIYENLFFMRRETTIPDREINIDFFVKFKNNFLGEVLYLNDSPVGIQLLITSTSTLGFFVDFINIGYDMEI
KAHSIGTILMWNNLEKATARAHALALPLHFSFGFMSGKYKQRWCNPVGVGKTLI
>Mature_294_residues
MFLKFSGWDECSINDYTDCCSKYGYNSESSPHYIEFMLHHGADLRFIAYRKNKLLGAACLDGKWLVNDFKNPNKSMSNLP
IPSSSIVLPFSSEVKCIAPFKTKCLSPLRKNIINASFHFFTKRTAAFAKNIETDFSKKTISTRRREIKKFIADGGSFVDI
SQFSGEELFSIYENLFFMRRETTIPDREINIDFFVKFKNNFLGEVLYLNDSPVGIQLLITSTSTLGFFVDFINIGYDMEI
KAHSIGTILMWNNLEKATARAHALALPLHFSFGFMSGKYKQRWCNPVGVGKTLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33567; Mature: 33567

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLKFSGWDECSINDYTDCCSKYGYNSESSPHYIEFMLHHGADLRFIAYRKNKLLGAACL
CEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEECCCEEEEEEC
DGKWLVNDFKNPNKSMSNLPIPSSSIVLPFSSEVKCIAPFKTKCLSPLRKNIINASFHFF
CCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCHHHHHHHHHHHHHHCCHHHHH
TKRTAAFAKNIETDFSKKTISTRRREIKKFIADGGSFVDISQFSGEELFSIYENLFFMRR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCCCHHHHHHHHHHHHHHH
ETTIPDREINIDFFVKFKNNFLGEVLYLNDSPVGIQLLITSTSTLGFFVDFINIGYDMEI
CCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCEEE
KAHSIGTILMWNNLEKATARAHALALPLHFSFGFMSGKYKQRWCNPVGVGKTLI
EECCCEEEEEECCCHHHHHHHHEEEEEEEEEECCCCCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MFLKFSGWDECSINDYTDCCSKYGYNSESSPHYIEFMLHHGADLRFIAYRKNKLLGAACL
CEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEECCCEEEEEEC
DGKWLVNDFKNPNKSMSNLPIPSSSIVLPFSSEVKCIAPFKTKCLSPLRKNIINASFHFF
CCEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCHHHHHHHHHHHHHHCCHHHHH
TKRTAAFAKNIETDFSKKTISTRRREIKKFIADGGSFVDISQFSGEELFSIYENLFFMRR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHCCCHHHHHHHHHHHHHHH
ETTIPDREINIDFFVKFKNNFLGEVLYLNDSPVGIQLLITSTSTLGFFVDFINIGYDMEI
CCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCEEE
KAHSIGTILMWNNLEKATARAHALALPLHFSFGFMSGKYKQRWCNPVGVGKTLI
EECCCEEEEEECCCHHHHHHHHEEEEEEEEEECCCCCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA