| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920058
Identifier: 238920058
GI number: 238920058
Start: 2092478
End: 2092729
Strand: Direct
Name: 238920058
Synonym: NT01EI_2163
Alternate gene names: NA
Gene position: 2092478-2092729 (Clockwise)
Preceding gene: 238920057
Following gene: 238920059
Centisome position: 54.89
GC content: 57.14
Gene sequence:
>252_bases ATGAGCAGTAGCGTCGGTTGGCAGATAACGCTACCGGAAGTCATCGATGAGCATGCGCCTGTGCCACAGCCTCTGCCTCT CCCGGTACCGCTACAGCATTTTCGCTTTAAACGAAATGGCTCTCTGGAGATCCCGCCAGATCCGGGTCGGCTACGGACTT TATCCGGGCACGCAGACTGTATCGTGATCAGCCCAACGGCGATCATCGGCAGCACCATTAACCATTCCCACGTCTCCTCC GTCGACACCTGA
Upstream 100 bases:
>100_bases TTTTCCATGCCGCTCCGCACTGGATGAGCAGCCTCTGCTGATCAGCGTATTACAGGGCAGTATCTCGATCGTCAGGCCGC ACCGCACACCATTGCACACG
Downstream 100 bases:
>100_bases CAGACGCCGACAGCCGTCACCGGCGATCGGCTCTATATCGGCACCGGCACTTGAATTATCGGCCCCGTCGCCACTGGCAG CGATGAAACAATAGGTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MSSSVGWQITLPEVIDEHAPVPQPLPLPVPLQHFRFKRNGSLEIPPDPGRLRTLSGHADCIVISPTAIIGSTINHSHVSS VDT
Sequences:
>Translated_83_residues MSSSVGWQITLPEVIDEHAPVPQPLPLPVPLQHFRFKRNGSLEIPPDPGRLRTLSGHADCIVISPTAIIGSTINHSHVSS VDT >Mature_82_residues SSSVGWQITLPEVIDEHAPVPQPLPLPVPLQHFRFKRNGSLEIPPDPGRLRTLSGHADCIVISPTAIIGSTINHSHVSSV DT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8966; Mature: 8835
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSVGWQITLPEVIDEHAPVPQPLPLPVPLQHFRFKRNGSLEIPPDPGRLRTLSGHADC CCCCCCEEEECHHHHHCCCCCCCCCCCCCCHHHEEECCCCCEECCCCCCCEEEECCCCCE IVISPTAIIGSTINHSHVSSVDT EEECCHHEECCCCCCCCCCCCCC >Mature Secondary Structure SSSVGWQITLPEVIDEHAPVPQPLPLPVPLQHFRFKRNGSLEIPPDPGRLRTLSGHADC CCCCCEEEECHHHHHCCCCCCCCCCCCCCHHHEEECCCCCEECCCCCCCEEEECCCCCE IVISPTAIIGSTINHSHVSSVDT EEECCHHEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA