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The map label for this gene is yxeQ [H]

Identifier: 238920038

GI number: 238920038

Start: 2072198

End: 2073601

Strand: Reverse

Name: yxeQ [H]

Synonym: NT01EI_2142

Alternate gene names: 238920038

Gene position: 2073601-2072198 (Counterclockwise)

Preceding gene: 238920039

Following gene: 238920035

Centisome position: 54.39

GC content: 54.84

Gene sequence:

>1404_bases
ATGATGACCTTAAGCGAACAGATCAGCGAATTTATTACCCGATTTGATCTAGATACTATCCCGGAAGCTGTGATTGTACG
GGCGCGTCTCCATTTGTTGGATACGCTGGGGGTTGCCATCGCCGGAACACGTCAGGCGGCCGCGGTTAACGCTCGCTGTG
TACTGAGTACCCTGGTGCAGGCCCCAAGCCACTGCCATGTTTGGGCAAGCACGATTACGCTCTCACCGGAGTATGCTGTA
CTGGCTAATGGCATCGCGGCTCATGCGCTGGATTTTGATGATACCCATACCGATTCGATCACCCATGGCAGCGCCGTATT
AGTCCCACTGGTGATGGCTCTGAGCGAAGATATGAATCTCAGTGGTAAAGAGATGCTGTCAGCCTATATTATCGGTTGGG
AAGTGGCGGCTCGCGTTGGATTGGCCTCGCAGGGAAGTTTCCACAAGCGCGGCTTCCATACGACCCCTGTCGCCGGTATC
TTCGGTGCTGCCAGCGCGGCCTCTCGTCTGTTAGGACTTTCGGCCCAAGAGTGTGCCCATGCTATCGGCCTGGCCGGTAG
CCAAGCCTCCGGTGTGGCGGAGTACCTGAGCAACAGCTCTTCCTCCAAGTGTTTTCACGCCGGCTGGGCGGCCCACTCAG
CTATCTTGGCCGTGCGCCTTGCCCAGGCGGGCATGACGGGCCCGCTGACCATTTTCGAAGGGCGCTTTGGCCTCTTCATG
ACCCACGGTCTGCATCATAGCTCCGTGCCGGGCCAGATCAGCAGGGGGTTGGGGCAGCGGTGGGAGCTGTTGAATGTTTC
AATCAAGCCTTACCCTTGCTGTCACTTCGCTCATGCCAGCGTCGATTGCGTCCGCATGTTACGCCACGATGGCATTGCTC
CCGAAGACATCGTTGAGATCCAGTGTGTCGTGGATCCGGTGGCGGGGGCTCTGATTTGTGAGCCGGCAGAAACTAAAATT
ACTCCCGGGACCCCTTATGCCGCCAAGTTTAGCCTGCCTTGGTTAGCCGCAACAGGCATGATCGATGACGGACTCAGTCT
CCGATCGTTCGACGCGACGGAGCTGGATCGCCCAGAGGTTCTCGCGCTGGCCGAAAAGATCTCGTTCCGTTATTGCGAAG
AGGGAGAGATCCCATTCCCGGAATATTTTCCGGGGCGCATTATCGTCACGTTAACCGATGGCCGTGAAGTGACTAAACAC
CTCGATATTAACTATGGCCATCCGGAAAACCCTATGCTGCCTGGCAATGTTGAAAGAAAATTCCGTGATAATGTCAATGG
AGTTCTTAAGCCACGGGCAGCAGAACGGATTATTGATTTAGTTAATTCTCTCGATAATAACCCTATCACCGAGCTCTCCG
AGCAGTTAAGCGATATTATTAATTCAAATGATGGGTCACGCTAA

Upstream 100 bases:

>100_bases
ATGGCGGGGGAGGCCTACCGCAGTACTCCAGGGGCGTTATCCCTGCATTGAGAGTTCTCCGATGACTATTCTGGAAAATA
TGTCCTGATTTGGAATGAAT

Downstream 100 bases:

>100_bases
GATGTAAGTAATTTGGCATCGAAATAACGATGCCAAATGTCATTTTTATTGTATCTCGGCGAGCACTTGATGTAACGCAT
TAACGGCATCCGTGCCAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MMTLSEQISEFITRFDLDTIPEAVIVRARLHLLDTLGVAIAGTRQAAAVNARCVLSTLVQAPSHCHVWASTITLSPEYAV
LANGIAAHALDFDDTHTDSITHGSAVLVPLVMALSEDMNLSGKEMLSAYIIGWEVAARVGLASQGSFHKRGFHTTPVAGI
FGAASAASRLLGLSAQECAHAIGLAGSQASGVAEYLSNSSSSKCFHAGWAAHSAILAVRLAQAGMTGPLTIFEGRFGLFM
THGLHHSSVPGQISRGLGQRWELLNVSIKPYPCCHFAHASVDCVRMLRHDGIAPEDIVEIQCVVDPVAGALICEPAETKI
TPGTPYAAKFSLPWLAATGMIDDGLSLRSFDATELDRPEVLALAEKISFRYCEEGEIPFPEYFPGRIIVTLTDGREVTKH
LDINYGHPENPMLPGNVERKFRDNVNGVLKPRAAERIIDLVNSLDNNPITELSEQLSDIINSNDGSR

Sequences:

>Translated_467_residues
MMTLSEQISEFITRFDLDTIPEAVIVRARLHLLDTLGVAIAGTRQAAAVNARCVLSTLVQAPSHCHVWASTITLSPEYAV
LANGIAAHALDFDDTHTDSITHGSAVLVPLVMALSEDMNLSGKEMLSAYIIGWEVAARVGLASQGSFHKRGFHTTPVAGI
FGAASAASRLLGLSAQECAHAIGLAGSQASGVAEYLSNSSSSKCFHAGWAAHSAILAVRLAQAGMTGPLTIFEGRFGLFM
THGLHHSSVPGQISRGLGQRWELLNVSIKPYPCCHFAHASVDCVRMLRHDGIAPEDIVEIQCVVDPVAGALICEPAETKI
TPGTPYAAKFSLPWLAATGMIDDGLSLRSFDATELDRPEVLALAEKISFRYCEEGEIPFPEYFPGRIIVTLTDGREVTKH
LDINYGHPENPMLPGNVERKFRDNVNGVLKPRAAERIIDLVNSLDNNPITELSEQLSDIINSNDGSR
>Mature_467_residues
MMTLSEQISEFITRFDLDTIPEAVIVRARLHLLDTLGVAIAGTRQAAAVNARCVLSTLVQAPSHCHVWASTITLSPEYAV
LANGIAAHALDFDDTHTDSITHGSAVLVPLVMALSEDMNLSGKEMLSAYIIGWEVAARVGLASQGSFHKRGFHTTPVAGI
FGAASAASRLLGLSAQECAHAIGLAGSQASGVAEYLSNSSSSKCFHAGWAAHSAILAVRLAQAGMTGPLTIFEGRFGLFM
THGLHHSSVPGQISRGLGQRWELLNVSIKPYPCCHFAHASVDCVRMLRHDGIAPEDIVEIQCVVDPVAGALICEPAETKI
TPGTPYAAKFSLPWLAATGMIDDGLSLRSFDATELDRPEVLALAEKISFRYCEEGEIPFPEYFPGRIIVTLTDGREVTKH
LDINYGHPENPMLPGNVERKFRDNVNGVLKPRAAERIIDLVNSLDNNPITELSEQLSDIINSNDGSR

Specific function: Unknown

COG id: COG2079

COG function: function code R; Uncharacterized protein involved in propionate catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prpD family [H]

Homologues:

Organism=Homo sapiens, GI310129732, Length=459, Percent_Identity=28.1045751633987, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI310110533, Length=459, Percent_Identity=28.1045751633987, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI310123058, Length=440, Percent_Identity=28.8636363636364, Blast_Score=154, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005656 [H]

Pfam domain/function: PF03972 MmgE_PrpD [H]

EC number: NA

Molecular weight: Translated: 50192; Mature: 50192

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTLSEQISEFITRFDLDTIPEAVIVRARLHLLDTLGVAIAGTRQAAAVNARCVLSTLVQ
CCCHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHC
APSHCHVWASTITLSPEYAVLANGIAAHALDFDDTHTDSITHGSAVLVPLVMALSEDMNL
CCCCCEEEEEEEEECCCHHHHHCCHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
SGKEMLSAYIIGWEVAARVGLASQGSFHKRGFHTTPVAGIFGAASAASRLLGLSAQECAH
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH
AIGLAGSQASGVAEYLSNSSSSKCFHAGWAAHSAILAVRLAQAGMTGPLTIFEGRFGLFM
HHHCCCCCHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEE
THGLHHSSVPGQISRGLGQRWELLNVSIKPYPCCHFAHASVDCVRMLRHDGIAPEDIVEI
ECCCCCCCCCCHHHHCCCCCEEEEEEECCCCCCHHHHHCHHHHHHHHHHCCCCCHHHEEE
QCVVDPVAGALICEPAETKITPGTPYAAKFSLPWLAATGMIDDGLSLRSFDATELDRPEV
EEEECCCCCEEEECCCCCCCCCCCCCEEEECCCHHEECCCCCCCCCCCCCCCCCCCCHHH
LALAEKISFRYCEEGEIPFPEYFPGRIIVTLTDGREVTKHLDINYGHPENPMLPGNVERK
HHHHHHHHHEECCCCCCCCCCCCCCEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCHHH
FRDNVNGVLKPRAAERIIDLVNSLDNNPITELSEQLSDIINSNDGSR
HHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MMTLSEQISEFITRFDLDTIPEAVIVRARLHLLDTLGVAIAGTRQAAAVNARCVLSTLVQ
CCCHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHC
APSHCHVWASTITLSPEYAVLANGIAAHALDFDDTHTDSITHGSAVLVPLVMALSEDMNL
CCCCCEEEEEEEEECCCHHHHHCCHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
SGKEMLSAYIIGWEVAARVGLASQGSFHKRGFHTTPVAGIFGAASAASRLLGLSAQECAH
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH
AIGLAGSQASGVAEYLSNSSSSKCFHAGWAAHSAILAVRLAQAGMTGPLTIFEGRFGLFM
HHHCCCCCHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEE
THGLHHSSVPGQISRGLGQRWELLNVSIKPYPCCHFAHASVDCVRMLRHDGIAPEDIVEI
ECCCCCCCCCCHHHHCCCCCEEEEEEECCCCCCHHHHHCHHHHHHHHHHCCCCCHHHEEE
QCVVDPVAGALICEPAETKITPGTPYAAKFSLPWLAATGMIDDGLSLRSFDATELDRPEV
EEEECCCCCEEEECCCCCCCCCCCCCEEEECCCHHEECCCCCCCCCCCCCCCCCCCCHHH
LALAEKISFRYCEEGEIPFPEYFPGRIIVTLTDGREVTKHLDINYGHPENPMLPGNVERK
HHHHHHHHHEECCCCCCCCCCCCCCEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCHHH
FRDNVNGVLKPRAAERIIDLVNSLDNNPITELSEQLSDIINSNDGSR
HHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377 [H]