Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238920035

Identifier: 238920035

GI number: 238920035

Start: 2069606

End: 2070052

Strand: Reverse

Name: 238920035

Synonym: NT01EI_2138

Alternate gene names: NA

Gene position: 2070052-2069606 (Counterclockwise)

Preceding gene: 238920038

Following gene: 238920033

Centisome position: 54.3

GC content: 43.85

Gene sequence:

>447_bases
GTGCGTCCGTTTGTCAAAAGTAATAAAAATGATTTTGTTGACGCTGAAGCAATATGTGAAGCCGCATCCCGACCATCCAT
GCGTTTTGTCCAGCCTAGAACAGAAGGACAGCAGGCGATGCGAGCATTGCATCGGGTCAGGGAATCACTTATCAGAGACA
AGGTGAAAACAACCAACCAGATGCACGGTTTTTTACTGGAATTTGGTATCAGTCTGCCAATAGGCGATTCAGTCATTAAG
CGGTTGTCCCTGGTGCTCGCGGAACATGAAATACCTGAATATTTGAGCCGTTTGCTGATGAAATTGCATGCCCACTATCT
TTATCTTGTTGAGCAAATAACAGAGCTGGAGTCAGAATTAAACCAGTCAATCAAAGTCGATGATACTGCTCAACGTATTA
TGAGACCCTGTACACGATTCTGTGTAAATGCCTTTTCTCAGAAGTGA

Upstream 100 bases:

>100_bases
AAGCCCGTAAACCCGGCGTCAAAGAGAGGATTGTTGATCTGGCCTTCAACGGCTCAGGTGTTCGTGATACCGCTCGTATT
CTCAATTCTCTCCGCAATTC

Downstream 100 bases:

>100_bases
CCGTCCAGACGATCACCGAACTCGATAATAAAGCGGCTCATTGCCATACGCCAGTCCCTCAGCGGCATGGTCCATTTCTG
TGATGCCGCCTGGATCGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MRPFVKSNKNDFVDAEAICEAASRPSMRFVQPRTEGQQAMRALHRVRESLIRDKVKTTNQMHGFLLEFGISLPIGDSVIK
RLSLVLAEHEIPEYLSRLLMKLHAHYLYLVEQITELESELNQSIKVDDTAQRIMRPCTRFCVNAFSQK

Sequences:

>Translated_148_residues
MRPFVKSNKNDFVDAEAICEAASRPSMRFVQPRTEGQQAMRALHRVRESLIRDKVKTTNQMHGFLLEFGISLPIGDSVIK
RLSLVLAEHEIPEYLSRLLMKLHAHYLYLVEQITELESELNQSIKVDDTAQRIMRPCTRFCVNAFSQK
>Mature_148_residues
MRPFVKSNKNDFVDAEAICEAASRPSMRFVQPRTEGQQAMRALHRVRESLIRDKVKTTNQMHGFLLEFGISLPIGDSVIK
RLSLVLAEHEIPEYLSRLLMKLHAHYLYLVEQITELESELNQSIKVDDTAQRIMRPCTRFCVNAFSQK

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 17118; Mature: 17118

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPFVKSNKNDFVDAEAICEAASRPSMRFVQPRTEGQQAMRALHRVRESLIRDKVKTTNQ
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MHGFLLEFGISLPIGDSVIKRLSLVLAEHEIPEYLSRLLMKLHAHYLYLVEQITELESEL
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQSIKVDDTAQRIMRPCTRFCVNAFSQK
HCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRPFVKSNKNDFVDAEAICEAASRPSMRFVQPRTEGQQAMRALHRVRESLIRDKVKTTNQ
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MHGFLLEFGISLPIGDSVIKRLSLVLAEHEIPEYLSRLLMKLHAHYLYLVEQITELESEL
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQSIKVDDTAQRIMRPCTRFCVNAFSQK
HCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7607411 [H]