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The map label for this gene is ydgK [H]

Identifier: 238919981

GI number: 238919981

Start: 2006924

End: 2007355

Strand: Direct

Name: ydgK [H]

Synonym: NT01EI_2085

Alternate gene names: 238919981

Gene position: 2006924-2007355 (Clockwise)

Preceding gene: 238919980

Following gene: 238919982

Centisome position: 52.64

GC content: 58.1

Gene sequence:

>432_bases
ATGAAAACTGACCGTATCGGCGGCTGGCTGTTTGCGCCATTGGCCTACATGATCCTCTCTCTCGTCTCCTCCAGCCTGAT
GCTGGCGCTGTTCGTCATGACGCTGCTGCAGCACGGCGGCAGCGGACGCCTGTGGGCTCACGGCGGCACCTTTTCATCAC
AGTGGGGGCTCTCTCTGTTAATTACTCTGGGCGTGTGGTGTTTCTCGCTGCACGTACTGCGCCTGTTTTTTAAACGCTCA
CGACGCTTCCCCAAACATTTCATCGCCTGGCTGCTGGTCATGCTGCTGCTGGCGCTGAAATCCTTTGCCTTCTCGCCGAT
CAGCGATACCCTGGCACTGCGCGGGATCGTCACGCCGCTGCTTGCCGCCGCCGTATTTGTTCCCTATATCAAGCGTTCGG
CCCGCGTACGCCAGACATTTATTGAGCAATAG

Upstream 100 bases:

>100_bases
CGTTGGACTAAGCTAACGCCCGCCCCCGATCCCTGCTCCCTCCGGCGCCGGGATCGGGTATACTCCCCCGCATTCGCCCT
TTTATCCGGTATTGCATACG

Downstream 100 bases:

>100_bases
TGTCAATTTACACCGGCGGCGCCGCCTTCATCGTGGGTAATTTGCGCAAATCGCAATACCCCTACGTTTGATCTGTTGTC
GTCAGCCGACTAAACCCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKTDRIGGWLFAPLAYMILSLVSSSLMLALFVMTLLQHGGSGRLWAHGGTFSSQWGLSLLITLGVWCFSLHVLRLFFKRS
RRFPKHFIAWLLVMLLLALKSFAFSPISDTLALRGIVTPLLAAAVFVPYIKRSARVRQTFIEQ

Sequences:

>Translated_143_residues
MKTDRIGGWLFAPLAYMILSLVSSSLMLALFVMTLLQHGGSGRLWAHGGTFSSQWGLSLLITLGVWCFSLHVLRLFFKRS
RRFPKHFIAWLLVMLLLALKSFAFSPISDTLALRGIVTPLLAAAVFVPYIKRSARVRQTFIEQ
>Mature_143_residues
MKTDRIGGWLFAPLAYMILSLVSSSLMLALFVMTLLQHGGSGRLWAHGGTFSSQWGLSLLITLGVWCFSLHVLRLFFKRS
RRFPKHFIAWLLVMLLLALKSFAFSPISDTLALRGIVTPLLAAAVFVPYIKRSARVRQTFIEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 sll0481 [H]

Homologues:

Organism=Escherichia coli, GI87081948, Length=139, Percent_Identity=43.1654676258993, Blast_Score=97, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019690 [H]

Pfam domain/function: PF10754 DUF2569 [H]

EC number: NA

Molecular weight: Translated: 16113; Mature: 16113

Theoretical pI: Translated: 12.18; Mature: 12.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTDRIGGWLFAPLAYMILSLVSSSLMLALFVMTLLQHGGSGRLWAHGGTFSSQWGLSLL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHH
ITLGVWCFSLHVLRLFFKRSRRFPKHFIAWLLVMLLLALKSFAFSPISDTLALRGIVTPL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LAAAVFVPYIKRSARVRQTFIEQ
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTDRIGGWLFAPLAYMILSLVSSSLMLALFVMTLLQHGGSGRLWAHGGTFSSQWGLSLL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHH
ITLGVWCFSLHVLRLFFKRSRRFPKHFIAWLLVMLLLALKSFAFSPISDTLALRGIVTPL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LAAAVFVPYIKRSARVRQTFIEQ
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]