| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yfeH [H]
Identifier: 238919978
GI number: 238919978
Start: 2003108
End: 2004094
Strand: Reverse
Name: yfeH [H]
Synonym: NT01EI_2082
Alternate gene names: 238919978
Gene position: 2004094-2003108 (Counterclockwise)
Preceding gene: 238919979
Following gene: 238919974
Centisome position: 52.57
GC content: 60.99
Gene sequence:
>987_bases ATGTCCTGGCTGCGGCGTTTACGCGTTGATCCATTTCTGTTGGTACTGATCCTGGTGGTGCTGCTGGCATCGCTATTGCC CTGTCGCGGCGAAGCCAAGACCCTGTTTGGTCACCTGACGACGGCGGCTATCGCGCTGCTGTTTTTTATGCATGGTGCCA AGCTGTCGCGTGAGGCGATCGGCGCCGGCATCGGCCACTGGCGGTTGCATCTCGTGATATTCCTGAGCACTTTCGTACTG TTTCCTCTGCTGGGTGCGGGCCTGGGGGGGCTGGTGCCGGTGCTGATGAGCCCCGTTGTCTATCTGGGCTTTTTGTATCT GTGCGCGCTGCCGGCGACGGTGCAGTCGGCCATTGCCTATACCTCGATGGCCGGCGGCAACGTGGCGGCGGCCATCTGCA GCGCCTCGGCCTCCAGTATGCTGGGGGTGTTTTTATCGCCGCTGCTGGTGGGGCTGCTGATGCATACGCAGGGCGACAAT ATCGATAGCCTGCACGCCATCGGCGCGATTGTGCTGCAGCTGATGCTGCCGTTCCTGTTGGGGCATCTGTCGCGTCCGCT GACGGCAGCCTGGGTGGCCCGCCACCGGCGTCTGATCAATGTAACCGACCGCTCATCGATCTTGCTGGTGGTCTATACCG CATTCAGTGAGGCGGTGATCGAGGGGATCTGGCAGCGTATTGACGCCGGCTCGCTCGGGGTGATCGTGCTGGTCTCCTGC CTGCTGCTGGCAATTGTGCTGCTGATTAATACAGCCATGGCCAGGGCACTGGGATTTGATAAGGCCGATGAGATAACCAT TGTGTTCTGTGGCTCCAAAAAGAGCCTGGCCAACGGTATCCCGATGGCCAACGTGCTGTTTCCAGCGGCGGCCGTCGGGA TGATGGTGCTGCCTCTGATGATTTTTCACCAGTTGCAGCTGATGGTCTGTGCCTGGCTGGCCCAGCGCTACGCCCGCCGT TGTCAGGCGCCGGAGCGCGCTGAATAG
Upstream 100 bases:
>100_bases GGCGGAGATTTTGTCAGGGTCTGTAACAAGGGGCGTGGCAGCGGGGAGAAAGCCCGTTATGATGGGGACGCTCCCATTGA TTGACAAGGAAACCGGTGTT
Downstream 100 bases:
>100_bases CACGCTCCCAGAGTGTCCTGGGGAGTTAGCACATCTGCTTGGCGTCGCGCAGCACCTGTTTCTCCGCCGGGCTCAGGAAA GCCATGCTCAGGCCGTTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MSWLRRLRVDPFLLVLILVVLLASLLPCRGEAKTLFGHLTTAAIALLFFMHGAKLSREAIGAGIGHWRLHLVIFLSTFVL FPLLGAGLGGLVPVLMSPVVYLGFLYLCALPATVQSAIAYTSMAGGNVAAAICSASASSMLGVFLSPLLVGLLMHTQGDN IDSLHAIGAIVLQLMLPFLLGHLSRPLTAAWVARHRRLINVTDRSSILLVVYTAFSEAVIEGIWQRIDAGSLGVIVLVSC LLLAIVLLINTAMARALGFDKADEITIVFCGSKKSLANGIPMANVLFPAAAVGMMVLPLMIFHQLQLMVCAWLAQRYARR CQAPERAE
Sequences:
>Translated_328_residues MSWLRRLRVDPFLLVLILVVLLASLLPCRGEAKTLFGHLTTAAIALLFFMHGAKLSREAIGAGIGHWRLHLVIFLSTFVL FPLLGAGLGGLVPVLMSPVVYLGFLYLCALPATVQSAIAYTSMAGGNVAAAICSASASSMLGVFLSPLLVGLLMHTQGDN IDSLHAIGAIVLQLMLPFLLGHLSRPLTAAWVARHRRLINVTDRSSILLVVYTAFSEAVIEGIWQRIDAGSLGVIVLVSC LLLAIVLLINTAMARALGFDKADEITIVFCGSKKSLANGIPMANVLFPAAAVGMMVLPLMIFHQLQLMVCAWLAQRYARR CQAPERAE >Mature_327_residues SWLRRLRVDPFLLVLILVVLLASLLPCRGEAKTLFGHLTTAAIALLFFMHGAKLSREAIGAGIGHWRLHLVIFLSTFVLF PLLGAGLGGLVPVLMSPVVYLGFLYLCALPATVQSAIAYTSMAGGNVAAAICSASASSMLGVFLSPLLVGLLMHTQGDNI DSLHAIGAIVLQLMLPFLLGHLSRPLTAAWVARHRRLINVTDRSSILLVVYTAFSEAVIEGIWQRIDAGSLGVIVLVSCL LLAIVLLINTAMARALGFDKADEITIVFCGSKKSLANGIPMANVLFPAAAVGMMVLPLMIFHQLQLMVCAWLAQRYARRC QAPERAE
Specific function: Unknown
COG id: COG0385
COG function: function code R; Predicted Na+-dependent transporter
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI71725371, Length=335, Percent_Identity=26.5671641791045, Blast_Score=103, Evalue=3e-22, Organism=Escherichia coli, GI1788749, Length=313, Percent_Identity=69.0095846645367, Blast_Score=404, Evalue=1e-114,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016833 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35220; Mature: 35089
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWLRRLRVDPFLLVLILVVLLASLLPCRGEAKTLFGHLTTAAIALLFFMHGAKLSREAI CCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAGIGHWRLHLVIFLSTFVLFPLLGAGLGGLVPVLMSPVVYLGFLYLCALPATVQSAIAY HCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSMAGGNVAAAICSASASSMLGVFLSPLLVGLLMHTQGDNIDSLHAIGAIVLQLMLPFLL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GHLSRPLTAAWVARHRRLINVTDRSSILLVVYTAFSEAVIEGIWQRIDAGSLGVIVLVSC HHHCCCHHHHHHHHHHHHEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LLLAIVLLINTAMARALGFDKADEITIVFCGSKKSLANGIPMANVLFPAAAVGMMVLPLM HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHH IFHQLQLMVCAWLAQRYARRCQAPERAE HHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SWLRRLRVDPFLLVLILVVLLASLLPCRGEAKTLFGHLTTAAIALLFFMHGAKLSREAI CHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAGIGHWRLHLVIFLSTFVLFPLLGAGLGGLVPVLMSPVVYLGFLYLCALPATVQSAIAY HCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSMAGGNVAAAICSASASSMLGVFLSPLLVGLLMHTQGDNIDSLHAIGAIVLQLMLPFLL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GHLSRPLTAAWVARHRRLINVTDRSSILLVVYTAFSEAVIEGIWQRIDAGSLGVIVLVSC HHHCCCHHHHHHHHHHHHEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LLLAIVLLINTAMARALGFDKADEITIVFCGSKKSLANGIPMANVLFPAAAVGMMVLPLM HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHH IFHQLQLMVCAWLAQRYARRCQAPERAE HHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 7984428 [H]