| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is ymfG [C]
Identifier: 238919948
GI number: 238919948
Start: 1973625
End: 1973873
Strand: Direct
Name: ymfG [C]
Synonym: NT01EI_2052
Alternate gene names: 238919948
Gene position: 1973625-1973873 (Clockwise)
Preceding gene: 238919947
Following gene: 238919949
Centisome position: 51.77
GC content: 62.65
Gene sequence:
>249_bases ATGACAACCTACCTCACCATCCCGGCGTGGGCCCGGCAAGTCTATCTCGATAAGCCACCCTGTGTGGACACCGTCCGGCG CTGGATCCGGCGCGGCTATATTTACCCGCAGCCCTACCGCCACGGCCGCGCTTACCGTATTCAGAGCGATGCCCGCTACC TGCCACCCTGGCAGCAGCCCACCGTTCCCGACGGCACGGCGGCGTCTACCCCCACCTTGCTGGAGAGGCTAAAAAATGGT CCAAAATAA
Upstream 100 bases:
>100_bases TTCTCTTTGCTAAGCCCCTTCCTCTGCCCTAGACACGTGGTTAACTCTCTCTTATTAAAAACCAGGAAATCGCACCTCCT CCAGACTCTCGGAGCCCCCC
Downstream 100 bases:
>100_bases CGATGACAGCGCTACGCCAAAATTACCGGACAACCTGTACTGTAAGGGCGGGTTTTTCATCTGGCGCAATCCCCTCAGTG GGCAGGAGATGCCCCTGGGC
Product: excisionase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MTTYLTIPAWARQVYLDKPPCVDTVRRWIRRGYIYPQPYRHGRAYRIQSDARYLPPWQQPTVPDGTAASTPTLLERLKNG PK
Sequences:
>Translated_82_residues MTTYLTIPAWARQVYLDKPPCVDTVRRWIRRGYIYPQPYRHGRAYRIQSDARYLPPWQQPTVPDGTAASTPTLLERLKNG PK >Mature_81_residues TTYLTIPAWARQVYLDKPPCVDTVRRWIRRGYIYPQPYRHGRAYRIQSDARYLPPWQQPTVPDGTAASTPTLLERLKNGP K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9615; Mature: 9484
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTYLTIPAWARQVYLDKPPCVDTVRRWIRRGYIYPQPYRHGRAYRIQSDARYLPPWQQP CCEEEECCHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCC TVPDGTAASTPTLLERLKNGPK CCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure TTYLTIPAWARQVYLDKPPCVDTVRRWIRRGYIYPQPYRHGRAYRIQSDARYLPPWQQP CEEEECCHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCC TVPDGTAASTPTLLERLKNGPK CCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA