| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919946
Identifier: 238919946
GI number: 238919946
Start: 1973258
End: 1973401
Strand: Direct
Name: 238919946
Synonym: NT01EI_2050
Alternate gene names: NA
Gene position: 1973258-1973401 (Clockwise)
Preceding gene: 238919943
Following gene: 238919947
Centisome position: 51.76
GC content: 48.61
Gene sequence:
>144_bases ATGCCTGAATATTTCGCCTTCTTTATTAAAACCAAAAAACAGTCCGGTCAGCAGGACATGCTATTTTGCTACCAGGCTGA CAGTGTGCGCGTCGCCTATTCTCAACTCTATCGCGCTAACGGCCAGCGCCCTGCATCTAGATGA
Upstream 100 bases:
>100_bases CGATAGCACCGCTATTCAGCGCAATAACGCGACCGGGCGCACATCCCTCGGCCACCTTGTGATCAAGCGCCGATTTTATC CCCACTCGGAGAGCCTCGCC
Downstream 100 bases:
>100_bases TTACTTCACCCCGCGCCGAATGCCGCTACCGGTCGGCATCAAACTGCCCGCCGAAGGGAAACTCGACCGGGCGTTTTGCC GCCGCTATCACCTGGTCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 47; Mature: 46
Protein sequence:
>47_residues MPEYFAFFIKTKKQSGQQDMLFCYQADSVRVAYSQLYRANGQRPASR
Sequences:
>Translated_47_residues MPEYFAFFIKTKKQSGQQDMLFCYQADSVRVAYSQLYRANGQRPASR >Mature_46_residues PEYFAFFIKTKKQSGQQDMLFCYQADSVRVAYSQLYRANGQRPASR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5527; Mature: 5396
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEYFAFFIKTKKQSGQQDMLFCYQADSVRVAYSQLYRANGQRPASR CCCEEEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure PEYFAFFIKTKKQSGQQDMLFCYQADSVRVAYSQLYRANGQRPASR CCEEEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA